RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 FAM110DQ8TAY7 271 aaPredicted RBP7.07□□□□□ -1.28
PTPRA-204ENST00000380393 DAZ3Q9NR90 486 aaKnown RBP7.07□□□□□ -1.28
PTPRA-204ENST00000380393 PKDREJQ9NTG1 2253 aa7.06□□□□□ -1.28
PTPRA-204ENST00000380393 WNK2Q9Y3S1 2297 aa7.06□□□□□ -1.28
PTPRA-204ENST00000380393 TRBV19A0A075B6N1 114 aa7.06□□□□□ -1.28
PTPRA-204ENST00000380393 IGHV1-2P23083 117 aa7.06□□□□□ -1.28
PTPRA-204ENST00000380393 APRG1Q8IVJ8 170 aa7.06□□□□□ -1.28
PTPRA-204ENST00000380393 ARHGAP32A7KAX9 2087 aa7.06□□□□□ -1.28
PTPRA-204ENST00000380393 TRGV5A0A0B4J1U4 118 aa7.06□□□□□ -1.28
PTPRA-204ENST00000380393 RBMY1BA6NDE4 496 aaKnown RBP7.06□□□□□ -1.28
PTPRA-204ENST00000380393 RBMY1EA6NEQ0 496 aaKnown RBP7.06□□□□□ -1.28
PTPRA-204ENST00000380393 RBMY1DP0C7P1 496 aaKnown RBP7.06□□□□□ -1.28
PTPRA-204ENST00000380393 RBMY1A1P0DJD3 496 aaKnown RBP7.06□□□□□ -1.28
PTPRA-204ENST00000380393 RBMY1CP0DJD4 496 aa7.06□□□□□ -1.28
PTPRA-204ENST00000380393 RBMY1FQ15415 496 aaKnown RBP7.06□□□□□ -1.28
PTPRA-204ENST00000380393 AMELXQ99217 191 aa7.06□□□□□ -1.28
PTPRA-204ENST00000380393 CCL13Q99616 98 aa7.06□□□□□ -1.28
PTPRA-204ENST00000380393 NDUFA4L2Q9NRX3 87 aa7.06□□□□□ -1.28
PTPRA-204ENST00000380393 CD40P25942 277 aa7.06□□□□□ -1.28
PTPRA-204ENST00000380393 WT1-ASQ06250 92 aa7.06□□□□□ -1.28
PTPRA-204ENST00000380393 C4orf48Q5BLP8 95 aa7.06□□□□□ -1.28
PTPRA-204ENST00000380393 RUSC1-AS1Q66K80 236 aa7.06□□□□□ -1.28
PTPRA-204ENST00000380393 IGFL2Q6UWQ7 119 aa7.06□□□□□ -1.28
PTPRA-204ENST00000380393 Q6ZSV7 163 aa7.06□□□□□ -1.28
PTPRA-204ENST00000380393 TMEM14CQ9P0S9 112 aa7.06□□□□□ -1.28
PTPRA-204ENST00000380393 CFAP46Q8IYW2 2715 aa7.06□□□□□ -1.28
PTPRA-204ENST00000380393 IGHG2P01859 326 aa7.05□□□□□ -1.28
PTPRA-204ENST00000380393 ZNF80P51504 273 aaPredicted RBP7.05□□□□□ -1.28
PTPRA-204ENST00000380393 IGLV4-69A0A075B6H9 119 aa7.05□□□□□ -1.28
PTPRA-204ENST00000380393 DAND5Q8N907 189 aa7.05□□□□□ -1.28
PTPRA-204ENST00000380393 Q8TAT8 98 aa7.05□□□□□ -1.28
PTPRA-204ENST00000380393 CNFNQ9BYD5 112 aa7.05□□□□□ -1.28
PTPRA-204ENST00000380393 GHRHP01286 108 aa7.05□□□□□ -1.28
PTPRA-204ENST00000380393 PRB3Q04118 309 aaPredicted RBP7.05□□□□□ -1.28
PTPRA-204ENST00000380393 CD164Q04900 197 aa7.05□□□□□ -1.28
PTPRA-204ENST00000380393 RNASE6Q93091 150 aaKnown RBP7.05□□□□□ -1.28
PTPRA-204ENST00000380393 IGKV2-40A0A087WW87 121 aaPredicted RBP7.04□□□□□ -1.28
PTPRA-204ENST00000380393 TIMM17BO60830 172 aa7.04□□□□□ -1.28
PTPRA-204ENST00000380393 IGKV2D-40P01614 121 aaPredicted RBP7.04□□□□□ -1.28
PTPRA-204ENST00000380393 SLC25A15Q9Y619 301 aa7.04□□□□□ -1.28
PTPRA-204ENST00000380393 IGHV3-64A0A075B6Q5 118 aa7.04□□□□□ -1.28
PTPRA-204ENST00000380393 M0R1W7 72 aa7.04□□□□□ -1.28
PTPRA-204ENST00000380393 XCL1P47992 114 aa7.04□□□□□ -1.28
PTPRA-204ENST00000380393 C17orf58Q2M2W7 97 aa7.04□□□□□ -1.28
PTPRA-204ENST00000380393 XCL2Q9UBD3 114 aa7.04□□□□□ -1.28
PTPRA-204ENST00000380393 INAFM2P0DMQ5 153 aa7.03□□□□□ -1.28
PTPRA-204ENST00000380393 RBM3P98179 157 aaKnown RBP7.03□□□□□ -1.28
PTPRA-204ENST00000380393 USP24Q9UPU5 2620 aa7.03□□□□□ -1.28
PTPRA-204ENST00000380393 IGSF10Q6WRI0 2623 aa7.03□□□□□ -1.28
PTPRA-204ENST00000380393 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.02□□□□□ -1.29
PTPRA-204ENST00000380393 BUB3O43684 328 aa7.02□□□□□ -1.29
PTPRA-204ENST00000380393 Q6JHZ5 121 aa7.02□□□□□ -1.29
PTPRA-204ENST00000380393 COPS9Q8WXC6 57 aa7.02□□□□□ -1.29
PTPRA-204ENST00000380393 FANCD2OSQ96PS1 177 aa7.02□□□□□ -1.29
PTPRA-204ENST00000380393 S4R3C0 116 aa7.02□□□□□ -1.29
PTPRA-204ENST00000380393 DNAL4O96015 105 aa7.02□□□□□ -1.29
PTPRA-204ENST00000380393 SPRR3Q9UBC9 169 aa7.02□□□□□ -1.29
PTPRA-204ENST00000380393 SPTBN1Q01082 2364 aaKnown RBP7.02□□□□□ -1.29
PTPRA-204ENST00000380393 IGHV3OR16-10A0A075B7F0 116 aa7.02□□□□□ -1.29
PTPRA-204ENST00000380393 CCL3L1P16619 93 aa7.02□□□□□ -1.29
PTPRA-204ENST00000380393 SUMO2P61956 95 aaKnown RBP7.02□□□□□ -1.29
PTPRA-204ENST00000380393 SNRPD3P62318 126 aaKnown RBP7.02□□□□□ -1.29
PTPRA-204ENST00000380393 LYPD1Q8N2G4 141 aa7.02□□□□□ -1.29
PTPRA-204ENST00000380393 U3KQE9 123 aa7.02□□□□□ -1.29
PTPRA-204ENST00000380393 SRRM5B3KS81 715 aa7.01□□□□□ -1.29
PTPRA-204ENST00000380393 ZNF491Q8N8L2 437 aa7.01□□□□□ -1.29
PTPRA-204ENST00000380393 MPLKIPQ8TAP9 179 aa7.01□□□□□ -1.29
PTPRA-204ENST00000380393 H7BZZ5 65 aa7.01□□□□□ -1.29
PTPRA-204ENST00000380393 BAALC-AS2P0C853 105 aa7.01□□□□□ -1.29
PTPRA-204ENST00000380393 M0R1B8 84 aa7.01□□□□□ -1.29
PTPRA-204ENST00000380393 LRBAP50851 2863 aa7.01□□□□□ -1.29
PTPRA-204ENST00000380393 CGB1A6NKQ9 187 aa7□□□□□ -1.29
PTPRA-204ENST00000380393 LYPD5Q6UWN5 251 aa7□□□□□ -1.29
PTPRA-204ENST00000380393 LEPROTO15243 131 aa7□□□□□ -1.29
PTPRA-204ENST00000380393 ADAMTSL4-AS1Q5T5F5 129 aa7□□□□□ -1.29
PTPRA-204ENST00000380393 TRAV23DV6A0A075B6W5 121 aa7□□□□□ -1.29
PTPRA-204ENST00000380393 TRBV7-6A0A0J9YX20 115 aa7□□□□□ -1.29
PTPRA-204ENST00000380393 CCKP06307 115 aa7□□□□□ -1.29
PTPRA-204ENST00000380393 MRPS36P82909 103 aaKnown RBP7□□□□□ -1.29
PTPRA-204ENST00000380393 SPANXN1Q5VSR9 72 aa7□□□□□ -1.29
PTPRA-204ENST00000380393 ZNF575Q86XF7 245 aa7□□□□□ -1.29
PTPRA-204ENST00000380393 STHQ8IWL8 128 aa7□□□□□ -1.29
PTPRA-204ENST00000380393 A0A0J9YXY3 114 aa6.99□□□□□ -1.29
PTPRA-204ENST00000380393 ADARB2-AS1A8MUL3 147 aa6.99□□□□□ -1.29
PTPRA-204ENST00000380393 DEFB104AQ8WTQ1 72 aa6.99□□□□□ -1.29
PTPRA-204ENST00000380393 UBE2D4Q9Y2X8 147 aa6.99□□□□□ -1.29
PTPRA-204ENST00000380393 FLNCQ14315 2725 aa6.99□□□□□ -1.29
PTPRA-204ENST00000380393 HILS1P60008 231 aa6.99□□□□□ -1.29
PTPRA-204ENST00000380393 MSMPQ1L6U9 139 aa6.99□□□□□ -1.29
PTPRA-204ENST00000380393 S100A7L2Q5SY68 101 aa6.99□□□□□ -1.29
PTPRA-204ENST00000380393 IGFL4Q6B9Z1 124 aa6.99□□□□□ -1.29
PTPRA-204ENST00000380393 UTP20O75691 2785 aaKnown RBP6.98□□□□□ -1.29
PTPRA-204ENST00000380393 PAX4O43316 350 aa6.98□□□□□ -1.29
PTPRA-204ENST00000380393 TSHBP01222 138 aa6.98□□□□□ -1.29
PTPRA-204ENST00000380393 RPL39LQ96EH5 51 aaKnown RBP6.98□□□□□ -1.29
PTPRA-204ENST00000380393 MOB4Q9Y3A3 225 aa6.98□□□□□ -1.29
PTPRA-204ENST00000380393 MAP1AP78559 2803 aaPredicted RBP6.98□□□□□ -1.29
PTPRA-204ENST00000380393 MRPL55Q7Z7F7 128 aaKnown RBP6.98□□□□□ -1.29
PTPRA-204ENST00000380393 IGHV3OR16-8A0A075B7F1 116 aa6.97□□□□□ -1.29
PTPRA-204ENST00000380393 SDHAF1A6NFY7 115 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms