RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 MRPL51Q4U2R6 128 aaKnown RBP9.6□□□□□ -0.87
PRPF18-202ENST00000378572 PKD1P98161 4303 aa9.6□□□□□ -0.87
PRPF18-202ENST00000378572 PPBPP02775 128 aa9.59□□□□□ -0.87
PRPF18-202ENST00000378572 CRYGDP07320 174 aa9.59□□□□□ -0.87
PRPF18-202ENST00000378572 LINC00315P59091 139 aa9.59□□□□□ -0.87
PRPF18-202ENST00000378572 C14orf178Q8N769 122 aaPredicted RBP9.59□□□□□ -0.87
PRPF18-202ENST00000378572 NOP10Q9NPE3 64 aaKnown RBP9.59□□□□□ -0.87
PRPF18-202ENST00000378572 C16orf90A8MZG2 172 aa9.59□□□□□ -0.87
PRPF18-202ENST00000378572 HIST1H2BKO60814 126 aa9.59□□□□□ -0.87
PRPF18-202ENST00000378572 HIST1H2BJP06899 126 aa9.59□□□□□ -0.87
PRPF18-202ENST00000378572 HIST1H2BOP23527 126 aa9.59□□□□□ -0.87
PRPF18-202ENST00000378572 HIST1H2BBP33778 126 aa9.59□□□□□ -0.87
PRPF18-202ENST00000378572 HIST1H2BDP58876 126 aa9.59□□□□□ -0.87
PRPF18-202ENST00000378572 HIST1H2BCP62807 126 aa9.59□□□□□ -0.87
PRPF18-202ENST00000378572 HIST2H2BEQ16778 126 aa9.59□□□□□ -0.87
PRPF18-202ENST00000378572 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.59□□□□□ -0.87
PRPF18-202ENST00000378572 LINC00612Q8N6U2 182 aa9.59□□□□□ -0.87
PRPF18-202ENST00000378572 HIST1H2BHQ93079 126 aa9.59□□□□□ -0.87
PRPF18-202ENST00000378572 HIST1H2BNQ99877 126 aa9.59□□□□□ -0.87
PRPF18-202ENST00000378572 HIST1H2BMQ99879 126 aa9.59□□□□□ -0.87
PRPF18-202ENST00000378572 MRPL16Q9NX20 251 aaKnown RBP9.59□□□□□ -0.87
PRPF18-202ENST00000378572 TRGV1A0A0A0MS02 117 aa9.58□□□□□ -0.88
PRPF18-202ENST00000378572 NBDYA0A0U1RRE5 68 aa9.58□□□□□ -0.88
PRPF18-202ENST00000378572 RHODO00212 210 aa9.58□□□□□ -0.88
PRPF18-202ENST00000378572 RS1O15537 224 aa9.58□□□□□ -0.88
PRPF18-202ENST00000378572 KIAA1644Q3SXP7 199 aa9.58□□□□□ -0.88
PRPF18-202ENST00000378572 C6orf223Q8N319 242 aa9.58□□□□□ -0.88
PRPF18-202ENST00000378572 MRAP2Q96G30 205 aa9.58□□□□□ -0.88
PRPF18-202ENST00000378572 C18orf15Q96N68 181 aa9.58□□□□□ -0.88
PRPF18-202ENST00000378572 ALKBH7Q9BT30 221 aaPredicted RBP9.58□□□□□ -0.88
PRPF18-202ENST00000378572 JPT2Q9H910 190 aa9.58□□□□□ -0.88
PRPF18-202ENST00000378572 CIDEAO60543 219 aa9.57□□□□□ -0.88
PRPF18-202ENST00000378572 TNP2Q05952 138 aa9.57□□□□□ -0.88
PRPF18-202ENST00000378572 CFAP126Q5VTH2 177 aa9.57□□□□□ -0.88
PRPF18-202ENST00000378572 ZFP2Q6ZN57 461 aa9.57□□□□□ -0.88
PRPF18-202ENST00000378572 Q6ZTI0 123 aa9.57□□□□□ -0.88
PRPF18-202ENST00000378572 ORMDL3Q8N138 153 aa9.57□□□□□ -0.88
PRPF18-202ENST00000378572 TRAV4A0A0B4J268 109 aa9.56□□□□□ -0.88
PRPF18-202ENST00000378572 SRIP30626 198 aa9.56□□□□□ -0.88
PRPF18-202ENST00000378572 UFSP1Q6NVU6 142 aa9.56□□□□□ -0.88
PRPF18-202ENST00000378572 ZNRF2Q8NHG8 242 aa9.56□□□□□ -0.88
PRPF18-202ENST00000378572 SAMD10Q9BYL1 202 aa9.56□□□□□ -0.88
PRPF18-202ENST00000378572 LAMTOR2Q9Y2Q5 125 aa9.56□□□□□ -0.88
PRPF18-202ENST00000378572 RYR1P21817 5038 aa9.56□□□□□ -0.88
PRPF18-202ENST00000378572 A0A087WWL8 130 aa9.56□□□□□ -0.88
PRPF18-202ENST00000378572 D6R8Y8 96 aa9.56□□□□□ -0.88
PRPF18-202ENST00000378572 CKS2P33552 79 aa9.56□□□□□ -0.88
PRPF18-202ENST00000378572 LINC00518Q8N0U6 118 aa9.56□□□□□ -0.88
PRPF18-202ENST00000378572 LINC00588Q9Y4M8 146 aa9.56□□□□□ -0.88
PRPF18-202ENST00000378572 MGPP08493 103 aa9.55□□□□□ -0.88
PRPF18-202ENST00000378572 Q0VG73 95 aa9.55□□□□□ -0.88
PRPF18-202ENST00000378572 OR10J3Q5JRS4 329 aa9.55□□□□□ -0.88
PRPF18-202ENST00000378572 FAM74A4Q5TZK3 123 aa9.55□□□□□ -0.88
PRPF18-202ENST00000378572 TRAV26-1A0A087WT03 109 aa9.54□□□□□ -0.88
PRPF18-202ENST00000378572 A0A0J9YY99 117 aa9.54□□□□□ -0.88
PRPF18-202ENST00000378572 GAGE12BA1L429 117 aa9.54□□□□□ -0.88
PRPF18-202ENST00000378572 GAGE7O76087 117 aa9.54□□□□□ -0.88
PRPF18-202ENST00000378572 PPP1R17O96001 155 aa9.54□□□□□ -0.88
PRPF18-202ENST00000378572 GAGE12FP0CL80 117 aa9.54□□□□□ -0.88
PRPF18-202ENST00000378572 GAGE12GP0CL81 117 aa9.54□□□□□ -0.88
PRPF18-202ENST00000378572 GAGE12IP0CL82 117 aa9.54□□□□□ -0.88
PRPF18-202ENST00000378572 OR4C5Q8NGB2 326 aa9.54□□□□□ -0.88
PRPF18-202ENST00000378572 C18orf32Q8TCD1 76 aa9.54□□□□□ -0.88
PRPF18-202ENST00000378572 PRELID3AQ96N28 172 aa9.54□□□□□ -0.88
PRPF18-202ENST00000378572 COA6Q5JTJ3 125 aaKnown RBP9.53□□□□□ -0.88
PRPF18-202ENST00000378572 TRGV2A0A075B6R0 118 aa9.53□□□□□ -0.88
PRPF18-202ENST00000378572 ZNF56Q15929 161 aa9.53□□□□□ -0.88
PRPF18-202ENST00000378572 SUMO4Q6EEV6 95 aa9.53□□□□□ -0.88
PRPF18-202ENST00000378572 NRACQ8N912 160 aa9.53□□□□□ -0.88
PRPF18-202ENST00000378572 ABCA13Q86UQ4 5058 aa9.52□□□□□ -0.89
PRPF18-202ENST00000378572 F5H697 171 aa9.52□□□□□ -0.89
PRPF18-202ENST00000378572 SMKR1H3BMG3 65 aa9.52□□□□□ -0.89
PRPF18-202ENST00000378572 H7C1H1 209 aa9.52□□□□□ -0.89
PRPF18-202ENST00000378572 NCR2O95944 276 aa9.52□□□□□ -0.89
PRPF18-202ENST00000378572 IGHV3-53P01767 116 aa9.52□□□□□ -0.89
PRPF18-202ENST00000378572 TTC32Q5I0X7 151 aa9.52□□□□□ -0.89
PRPF18-202ENST00000378572 TRAV26-2A0A0B4J265 109 aa9.51□□□□□ -0.89
PRPF18-202ENST00000378572 PRSS47A8MTI9 375 aa9.51□□□□□ -0.89
PRPF18-202ENST00000378572 M0QY20 66 aa9.51□□□□□ -0.89
PRPF18-202ENST00000378572 TNFRSF6BO95407 300 aa9.51□□□□□ -0.89
PRPF18-202ENST00000378572 NPYP01303 97 aa9.51□□□□□ -0.89
PRPF18-202ENST00000378572 ZNF479Q96JC4 524 aa9.51□□□□□ -0.89
PRPF18-202ENST00000378572 GAS8-AS1O95177 125 aa9.51□□□□□ -0.89
PRPF18-202ENST00000378572 S100A6P06703 90 aa9.51□□□□□ -0.89
PRPF18-202ENST00000378572 MAPKAPK5-AS1Q8N8E1 139 aa9.51□□□□□ -0.89
PRPF18-202ENST00000378572 C20orf78Q9BR46 151 aa9.51□□□□□ -0.89
PRPF18-202ENST00000378572 Q9H8V8 135 aa9.51□□□□□ -0.89
PRPF18-202ENST00000378572 TRBV6-5A0A0K0K1A5 114 aa9.5□□□□□ -0.89
PRPF18-202ENST00000378572 GATA1P15976 413 aaPredicted RBP9.5□□□□□ -0.89
PRPF18-202ENST00000378572 NDUFA6P56556 154 aa9.5□□□□□ -0.89
PRPF18-202ENST00000378572 MAP1LC3AQ9H492 121 aa9.5□□□□□ -0.89
PRPF18-202ENST00000378572 RPL32P62910 135 aaKnown RBP9.49□□□□□ -0.89
PRPF18-202ENST00000378572 SPATA12Q7Z6I5 190 aa9.49□□□□□ -0.89
PRPF18-202ENST00000378572 BAGE3Q86Y29 109 aa9.49□□□□□ -0.89
PRPF18-202ENST00000378572 NIT2Q9NQR4 276 aa9.49□□□□□ -0.89
PRPF18-202ENST00000378572 IGHV3-73A0A0B4J1V6 119 aa9.48□□□□□ -0.89
PRPF18-202ENST00000378572 HOXA5P20719 270 aa9.48□□□□□ -0.89
PRPF18-202ENST00000378572 SUMO2P61956 95 aaKnown RBP9.48□□□□□ -0.89
PRPF18-202ENST00000378572 IQCJQ1A5X6 159 aa9.48□□□□□ -0.89
PRPF18-202ENST00000378572 RPL39LQ96EH5 51 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms