RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 PRADC1Q9BSG0 188 aa14.84□□□□□ -0.03
CBWD3-202ENST00000377342 MRPL18Q9H0U6 180 aaKnown RBP14.84□□□□□ -0.03
CBWD3-202ENST00000377342 D6R8Y8 96 aa14.83□□□□□ -0.04
CBWD3-202ENST00000377342 H7C1H1 209 aa14.83□□□□□ -0.04
CBWD3-202ENST00000377342 NRACQ8N912 160 aa14.83□□□□□ -0.04
CBWD3-202ENST00000377342 APCSP02743 223 aa14.82□□□□□ -0.04
CBWD3-202ENST00000377342 RAB5AP20339 215 aa14.82□□□□□ -0.04
CBWD3-202ENST00000377342 IGLL5B9A064 214 aa14.81□□□□□ -0.04
CBWD3-202ENST00000377342 KIAA1644Q3SXP7 199 aa14.81□□□□□ -0.04
CBWD3-202ENST00000377342 TRAPPC1Q9Y5R8 145 aa14.81□□□□□ -0.04
CBWD3-202ENST00000377342 A0A096LPF7 62 aa14.81□□□□□ -0.04
CBWD3-202ENST00000377342 GAGE12JA6NER3 117 aa14.81□□□□□ -0.04
CBWD3-202ENST00000377342 CKS2P33552 79 aa14.81□□□□□ -0.04
CBWD3-202ENST00000377342 GAGE1Q13065 139 aa14.81□□□□□ -0.04
CBWD3-202ENST00000377342 GAGE4Q13068 117 aa14.81□□□□□ -0.04
CBWD3-202ENST00000377342 GAGE5Q13069 117 aa14.81□□□□□ -0.04
CBWD3-202ENST00000377342 GAGE13Q4V321 117 aa14.81□□□□□ -0.04
CBWD3-202ENST00000377342 NIT2Q9NQR4 276 aa14.81□□□□□ -0.04
CBWD3-202ENST00000377342 ORMDL3Q8N138 153 aa14.8□□□□□ -0.04
CBWD3-202ENST00000377342 PLECQ15149 4684 aaKnown RBP14.79□□□□□ -0.04
CBWD3-202ENST00000377342 NPYP01303 97 aa14.79□□□□□ -0.04
CBWD3-202ENST00000377342 PPBPP02775 128 aa14.79□□□□□ -0.04
CBWD3-202ENST00000377342 FABP9Q0Z7S8 132 aa14.79□□□□□ -0.04
CBWD3-202ENST00000377342 ICOSQ9Y6W8 199 aa14.79□□□□□ -0.04
CBWD3-202ENST00000377342 TRBV7-3A0A075B6L6 115 aa14.78□□□□□ -0.04
CBWD3-202ENST00000377342 TRBV6-5A0A0K0K1A5 114 aa14.78□□□□□ -0.04
CBWD3-202ENST00000377342 UBE2D3P61077 147 aa14.78□□□□□ -0.04
CBWD3-202ENST00000377342 UBE2D2P62837 147 aa14.78□□□□□ -0.04
CBWD3-202ENST00000377342 OR10J3Q5JRS4 329 aa14.78□□□□□ -0.04
CBWD3-202ENST00000377342 ZNRF2Q8NHG8 242 aa14.78□□□□□ -0.04
CBWD3-202ENST00000377342 RPL36AP83881 106 aaKnown RBP14.77□□□□□ -0.04
CBWD3-202ENST00000377342 RPL36ALQ969Q0 106 aaKnown RBP14.77□□□□□ -0.04
CBWD3-202ENST00000377342 DNAJC30Q96LL9 226 aa14.77□□□□□ -0.04
CBWD3-202ENST00000377342 PRELID3AQ96N28 172 aa14.77□□□□□ -0.04
CBWD3-202ENST00000377342 PHOX2AO14813 284 aa14.77□□□□□ -0.05
CBWD3-202ENST00000377342 TNFRSF6BO95407 300 aa14.77□□□□□ -0.05
CBWD3-202ENST00000377342 NUDT3O95989 172 aa14.77□□□□□ -0.05
CBWD3-202ENST00000377342 C15orf53Q8NAA6 179 aa14.77□□□□□ -0.05
CBWD3-202ENST00000377342 APLNQ9ULZ1 77 aa14.77□□□□□ -0.05
CBWD3-202ENST00000377342 KLK5Q9Y337 293 aaPredicted RBP14.77□□□□□ -0.05
CBWD3-202ENST00000377342 SRIP30626 198 aa14.76□□□□□ -0.05
CBWD3-202ENST00000377342 MRPL23Q16540 153 aaKnown RBP14.76□□□□□ -0.05
CBWD3-202ENST00000377342 TRGC2P03986 189 aa14.75□□□□□ -0.05
CBWD3-202ENST00000377342 ALKBH7Q9BT30 221 aaPredicted RBP14.75□□□□□ -0.05
CBWD3-202ENST00000377342 TNFRSF18Q9Y5U5 241 aa14.75□□□□□ -0.05
CBWD3-202ENST00000377342 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.74□□□□□ -0.05
CBWD3-202ENST00000377342 SDHAF1A6NFY7 115 aa14.74□□□□□ -0.05
CBWD3-202ENST00000377342 CASC10Q5T4H9 136 aa14.74□□□□□ -0.05
CBWD3-202ENST00000377342 TMEM70Q9BUB7 260 aa14.74□□□□□ -0.05
CBWD3-202ENST00000377342 LAMTOR2Q9Y2Q5 125 aa14.74□□□□□ -0.05
CBWD3-202ENST00000377342 IGHV3-38A0A0C4DH36 116 aa14.73□□□□□ -0.05
CBWD3-202ENST00000377342 PPP1R17O96001 155 aa14.73□□□□□ -0.05
CBWD3-202ENST00000377342 SUMO2P61956 95 aaKnown RBP14.73□□□□□ -0.05
CBWD3-202ENST00000377342 NEGR1Q7Z3B1 354 aa14.73□□□□□ -0.05
CBWD3-202ENST00000377342 ST20Q9HBF5 79 aa14.73□□□□□ -0.05
CBWD3-202ENST00000377342 C3orf84H3BNL1 204 aa14.72□□□□□ -0.05
CBWD3-202ENST00000377342 POLR2KP53803 58 aaKnown RBP14.72□□□□□ -0.05
CBWD3-202ENST00000377342 ATP6V0E2Q8NHE4 81 aa14.72□□□□□ -0.05
CBWD3-202ENST00000377342 LYSTQ99698 3801 aa14.72□□□□□ -0.05
CBWD3-202ENST00000377342 C20orf78Q9BR46 151 aa14.71□□□□□ -0.05
CBWD3-202ENST00000377342 TCTAP57738 103 aa14.7□□□□□ -0.06
CBWD3-202ENST00000377342 SMIM2Q9BVW6 85 aa14.7□□□□□ -0.06
CBWD3-202ENST00000377342 TRBV27A0A0K0K1C4 114 aa14.69□□□□□ -0.06
CBWD3-202ENST00000377342 RPL32P62910 135 aaKnown RBP14.69□□□□□ -0.06
CBWD3-202ENST00000377342 SH2D6Q7Z4S9 175 aa14.69□□□□□ -0.06
CBWD3-202ENST00000377342 DAZ4Q86SG3 579 aaKnown RBP14.69□□□□□ -0.06
CBWD3-202ENST00000377342 DEFB104AQ8WTQ1 72 aa14.69□□□□□ -0.06
CBWD3-202ENST00000377342 DAZ3Q9NR90 486 aaKnown RBP14.69□□□□□ -0.06
CBWD3-202ENST00000377342 PRSS47A8MTI9 375 aa14.68□□□□□ -0.06
CBWD3-202ENST00000377342 IGLV2-18A0A075B6J9 118 aa14.68□□□□□ -0.06
CBWD3-202ENST00000377342 ESRGQ1W209 222 aa14.68□□□□□ -0.06
CBWD3-202ENST00000377342 C18orf32Q8TCD1 76 aa14.68□□□□□ -0.06
CBWD3-202ENST00000377342 GTSF1LQ9H1H1 148 aa14.68□□□□□ -0.06
CBWD3-202ENST00000377342 MAP1LC3AQ9H492 121 aa14.68□□□□□ -0.06
CBWD3-202ENST00000377342 IQCJQ1A5X6 159 aa14.67□□□□□ -0.06
CBWD3-202ENST00000377342 LYPD5Q6UWN5 251 aa14.67□□□□□ -0.06
CBWD3-202ENST00000377342 NTM-AS1Q6ZSK4 140 aa14.67□□□□□ -0.06
CBWD3-202ENST00000377342 LOC389332A0A1B0GUA5 103 aa14.66□□□□□ -0.06
CBWD3-202ENST00000377342 I3L3M4 83 aa14.65□□□□□ -0.06
CBWD3-202ENST00000377342 TSHBP01222 138 aa14.65□□□□□ -0.06
CBWD3-202ENST00000377342 TIRAPP58753 221 aa14.65□□□□□ -0.06
CBWD3-202ENST00000377342 VPS13DQ5THJ4 4388 aa14.65□□□□□ -0.06
CBWD3-202ENST00000377342 VCYO14598 125 aa14.65□□□□□ -0.06
CBWD3-202ENST00000377342 ALMS1Q8TCU4 4167 aa14.64□□□□□ -0.07
CBWD3-202ENST00000377342 PMCHP20382 165 aa14.64□□□□□ -0.07
CBWD3-202ENST00000377342 LINC00588Q9Y4M8 146 aa14.64□□□□□ -0.07
CBWD3-202ENST00000377342 IFI27P40305 119 aaPredicted RBP14.63□□□□□ -0.07
CBWD3-202ENST00000377342 Q8N8P6 123 aa14.63□□□□□ -0.07
CBWD3-202ENST00000377342 DNAH1Q9P2D7 4330 aa14.63□□□□□ -0.07
CBWD3-202ENST00000377342 TRBV6-8A0A0A6YYG3 113 aa14.62□□□□□ -0.07
CBWD3-202ENST00000377342 COTL1Q14019 142 aa14.62□□□□□ -0.07
CBWD3-202ENST00000377342 URB1-AS1Q96HZ7 61 aa14.61□□□□□ -0.07
CBWD3-202ENST00000377342 TCAPO15273 167 aa14.61□□□□□ -0.07
CBWD3-202ENST00000377342 LELP1Q5T871 98 aa14.61□□□□□ -0.07
CBWD3-202ENST00000377342 HIST1H2BKO60814 126 aa14.6□□□□□ -0.07
CBWD3-202ENST00000377342 HIST1H2BJP06899 126 aa14.6□□□□□ -0.07
CBWD3-202ENST00000377342 HIST1H2BOP23527 126 aa14.6□□□□□ -0.07
CBWD3-202ENST00000377342 HIST1H2BBP33778 126 aa14.6□□□□□ -0.07
CBWD3-202ENST00000377342 CCL18P55774 89 aa14.6□□□□□ -0.07
CBWD3-202ENST00000377342 HIST1H2BDP58876 126 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms