RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 NHP2Q9NX24 153 aaKnown RBP11.03□□□□□ -0.64
LMO4-201ENST00000370542 DKK2Q9UBU2 259 aa11.03□□□□□ -0.64
LMO4-201ENST00000370542 RBAKDNA6NC62 111 aa11.02□□□□□ -0.65
LMO4-201ENST00000370542 LINC01549A6NIU2 74 aa11.02□□□□□ -0.65
LMO4-201ENST00000370542 FABP5P3A8MUU1 101 aa11.02□□□□□ -0.65
LMO4-201ENST00000370542 OR11H12B2RN74 326 aa11.02□□□□□ -0.65
LMO4-201ENST00000370542 TNFRSF6BO95407 300 aa11.02□□□□□ -0.65
LMO4-201ENST00000370542 ARL3P36405 182 aa11.02□□□□□ -0.65
LMO4-201ENST00000370542 MFAP4P55083 255 aa11.02□□□□□ -0.65
LMO4-201ENST00000370542 DYNLRB2Q8TF09 96 aa11.02□□□□□ -0.65
LMO4-201ENST00000370542 GTSF1LQ9H1H1 148 aa11.02□□□□□ -0.65
LMO4-201ENST00000370542 CYSLTR1Q9Y271 337 aa11.02□□□□□ -0.65
LMO4-201ENST00000370542 ALMS1Q8TCU4 4167 aa11.02□□□□□ -0.65
LMO4-201ENST00000370542 A0A087WX48 190 aa11.01□□□□□ -0.65
LMO4-201ENST00000370542 H3BMG7 143 aa11.01□□□□□ -0.65
LMO4-201ENST00000370542 CLEC3BP05452 202 aa11.01□□□□□ -0.65
LMO4-201ENST00000370542 TCTAP57738 103 aa11.01□□□□□ -0.65
LMO4-201ENST00000370542 CKS1BP61024 79 aa11.01□□□□□ -0.65
LMO4-201ENST00000370542 SMAGPQ0VAQ4 97 aa11.01□□□□□ -0.65
LMO4-201ENST00000370542 TMEM61Q8N0U2 210 aa11.01□□□□□ -0.65
LMO4-201ENST00000370542 NAA38Q9BRA0 125 aaKnown RBP11.01□□□□□ -0.65
LMO4-201ENST00000370542 MRPL16Q9NX20 251 aaKnown RBP11.01□□□□□ -0.65
LMO4-201ENST00000370542 TRAV25A0A0B4J276 109 aa11□□□□□ -0.65
LMO4-201ENST00000370542 K7EIM0 57 aa11□□□□□ -0.65
LMO4-201ENST00000370542 IGHV3-23P01764 117 aa11□□□□□ -0.65
LMO4-201ENST00000370542 IL4P05112 153 aa11□□□□□ -0.65
LMO4-201ENST00000370542 ZC2HC1BQ5TFG8 222 aa11□□□□□ -0.65
LMO4-201ENST00000370542 RNF185Q96GF1 192 aa11□□□□□ -0.65
LMO4-201ENST00000370542 C8orf49Q96NF6 230 aa11□□□□□ -0.65
LMO4-201ENST00000370542 WFDC10AQ9H1F0 79 aa11□□□□□ -0.65
LMO4-201ENST00000370542 LAGE3Q14657 143 aa10.99□□□□□ -0.65
LMO4-201ENST00000370542 UNQ9165/PRO28630Q6UXU0 137 aa10.99□□□□□ -0.65
LMO4-201ENST00000370542 IL17DQ8TAD2 202 aa10.99□□□□□ -0.65
LMO4-201ENST00000370542 HIST1H4GQ99525 98 aa10.99□□□□□ -0.65
LMO4-201ENST00000370542 SPAG8Q99932 426 aaPredicted RBP10.99□□□□□ -0.65
LMO4-201ENST00000370542 RETNQ9HD89 108 aa10.99□□□□□ -0.65
LMO4-201ENST00000370542 S4R3C0 116 aa10.99□□□□□ -0.65
LMO4-201ENST00000370542 H7C1H1 209 aa10.98□□□□□ -0.65
LMO4-201ENST00000370542 TM4SF20Q53R12 229 aa10.98□□□□□ -0.65
LMO4-201ENST00000370542 IGKV2D-26A0A0A0MRZ7 120 aa10.97□□□□□ -0.65
LMO4-201ENST00000370542 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.97□□□□□ -0.65
LMO4-201ENST00000370542 WFDC2Q14508 124 aa10.97□□□□□ -0.65
LMO4-201ENST00000370542 MRPL53Q96EL3 112 aaKnown RBP10.97□□□□□ -0.65
LMO4-201ENST00000370542 C1QTNF4Q9BXJ3 329 aa10.97□□□□□ -0.65
LMO4-201ENST00000370542 SPANXA1Q9NS26 97 aa10.97□□□□□ -0.65
LMO4-201ENST00000370542 KIAA1109Q2LD37 5005 aa10.96□□□□□ -0.65
LMO4-201ENST00000370542 TRBV7-3A0A075B6L6 115 aa10.96□□□□□ -0.65
LMO4-201ENST00000370542 IGHV3-21A0A0B4J1V1 117 aa10.96□□□□□ -0.65
LMO4-201ENST00000370542 F8VRH5 84 aa10.96□□□□□ -0.65
LMO4-201ENST00000370542 F8W735 103 aaPredicted RBP10.96□□□□□ -0.65
LMO4-201ENST00000370542 ORMDL2Q53FV1 153 aa10.96□□□□□ -0.65
LMO4-201ENST00000370542 OR11H2Q8NH07 326 aa10.96□□□□□ -0.65
LMO4-201ENST00000370542 C17orf77Q96MU5 243 aa10.96□□□□□ -0.65
LMO4-201ENST00000370542 C18orf15Q96N68 181 aa10.96□□□□□ -0.65
LMO4-201ENST00000370542 FAM110AQ9BQ89 295 aa10.96□□□□□ -0.65
LMO4-201ENST00000370542 SLC50A1Q9BRV3 221 aa10.96□□□□□ -0.65
LMO4-201ENST00000370542 PRO0461Q9UI25 63 aa10.96□□□□□ -0.65
LMO4-201ENST00000370542 UFC1Q9Y3C8 167 aa10.96□□□□□ -0.65
LMO4-201ENST00000370542 IGLV2-18A0A075B6J9 118 aa10.95□□□□□ -0.66
LMO4-201ENST00000370542 TRBV20-1A0A075B6N2 111 aa10.95□□□□□ -0.66
LMO4-201ENST00000370542 IGHV4-4A0A075B6R2 117 aa10.95□□□□□ -0.66
LMO4-201ENST00000370542 TMSB15BA0A087X1C1 80 aa10.95□□□□□ -0.66
LMO4-201ENST00000370542 MYMXA0A1B0GTQ4 84 aa10.95□□□□□ -0.66
LMO4-201ENST00000370542 TMEM262E9PQX1 116 aa10.95□□□□□ -0.66
LMO4-201ENST00000370542 APOMO95445 188 aa10.95□□□□□ -0.66
LMO4-201ENST00000370542 ORM1P02763 201 aa10.95□□□□□ -0.66
LMO4-201ENST00000370542 PAPPA-AS1Q5QFB9 102 aa10.95□□□□□ -0.66
LMO4-201ENST00000370542 OVOL2Q9BRP0 275 aa10.95□□□□□ -0.66
LMO4-201ENST00000370542 SMKR1H3BMG3 65 aa10.94□□□□□ -0.66
LMO4-201ENST00000370542 K7EMT4 169 aa10.94□□□□□ -0.66
LMO4-201ENST00000370542 M0QXV9 152 aa10.94□□□□□ -0.66
LMO4-201ENST00000370542 M0R3E3 92 aa10.94□□□□□ -0.66
LMO4-201ENST00000370542 NDUFA4O00483 81 aa10.94□□□□□ -0.66
LMO4-201ENST00000370542 PPP1R17O96001 155 aa10.94□□□□□ -0.66
LMO4-201ENST00000370542 FOXI1Q12951 378 aa10.94□□□□□ -0.66
LMO4-201ENST00000370542 WFDC3Q8IUB2 231 aa10.94□□□□□ -0.66
LMO4-201ENST00000370542 K7ERJ3 54 aa10.93□□□□□ -0.66
LMO4-201ENST00000370542 CRYBA4P53673 196 aa10.93□□□□□ -0.66
LMO4-201ENST00000370542 ETDBQ3ZM63 59 aa10.93□□□□□ -0.66
LMO4-201ENST00000370542 PPDPFLQ8WWR9 84 aa10.93□□□□□ -0.66
LMO4-201ENST00000370542 DAZ1Q9NQZ3 744 aaKnown RBP10.93□□□□□ -0.66
LMO4-201ENST00000370542 IGHV3-35A0A0C4DH35 117 aa10.92□□□□□ -0.66
LMO4-201ENST00000370542 C20orf78Q9BR46 151 aa10.92□□□□□ -0.66
LMO4-201ENST00000370542 GEMIN7Q9H840 131 aaKnown RBP10.92□□□□□ -0.66
LMO4-201ENST00000370542 C21orf62Q9NYP8 219 aa10.92□□□□□ -0.66
LMO4-201ENST00000370542 MRPL35Q9NZE8 188 aaKnown RBP10.92□□□□□ -0.66
LMO4-201ENST00000370542 TP53TG1Q9Y2A0 90 aa10.92□□□□□ -0.66
LMO4-201ENST00000370542 SELENOKQ9Y6D0 94 aa10.92□□□□□ -0.66
LMO4-201ENST00000370542 KMT2AQ03164 3969 aa10.92□□□□□ -0.66
LMO4-201ENST00000370542 IGKV2-40A0A087WW87 121 aaPredicted RBP10.91□□□□□ -0.66
LMO4-201ENST00000370542 IGKV2D-40P01614 121 aaPredicted RBP10.91□□□□□ -0.66
LMO4-201ENST00000370542 CTSGP08311 255 aa10.91□□□□□ -0.66
LMO4-201ENST00000370542 CFAP126Q5VTH2 177 aa10.91□□□□□ -0.66
LMO4-201ENST00000370542 LENEPQ9Y5L5 61 aa10.91□□□□□ -0.66
LMO4-201ENST00000370542 HERVK_113P61574 105 aa10.9□□□□□ -0.66
LMO4-201ENST00000370542 ODF3L2Q3SX64 289 aa10.9□□□□□ -0.66
LMO4-201ENST00000370542 M0R381 172 aa10.89□□□□□ -0.67
LMO4-201ENST00000370542 FXYD7P58549 80 aa10.89□□□□□ -0.67
LMO4-201ENST00000370542 KIR2DL5BQ8NHK3 375 aa10.89□□□□□ -0.67
LMO4-201ENST00000370542 SPINK8P0C7L1 97 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms