RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 URB1-AS1Q96HZ7 61 aa14.03□□□□□ -0.16
CHTOP-204ENST00000368694 ZNF56Q15929 161 aa14.02□□□□□ -0.16
CHTOP-204ENST00000368694 DEFB135Q30KP9 77 aa14.02□□□□□ -0.16
CHTOP-204ENST00000368694 CRYGDP07320 174 aa14.02□□□□□ -0.17
CHTOP-204ENST00000368694 LINC00315P59091 139 aa14.02□□□□□ -0.17
CHTOP-204ENST00000368694 PIK3CD-AS1Q5SR53 167 aa14.02□□□□□ -0.17
CHTOP-204ENST00000368694 IL17DQ8TAD2 202 aa14.02□□□□□ -0.17
CHTOP-204ENST00000368694 MAP1LC3AQ9H492 121 aa14.02□□□□□ -0.17
CHTOP-204ENST00000368694 TRGV1A0A0A0MS02 117 aa14.01□□□□□ -0.17
CHTOP-204ENST00000368694 A8MWV9 139 aa14.01□□□□□ -0.17
CHTOP-204ENST00000368694 IFI27P40305 119 aaPredicted RBP14.01□□□□□ -0.17
CHTOP-204ENST00000368694 PTH2Q96A98 100 aa14.01□□□□□ -0.17
CHTOP-204ENST00000368694 FA2HQ7L5A8 372 aa14□□□□□ -0.17
CHTOP-204ENST00000368694 OR4C5Q8NGB2 326 aa14□□□□□ -0.17
CHTOP-204ENST00000368694 NOP10Q9NPE3 64 aaKnown RBP14□□□□□ -0.17
CHTOP-204ENST00000368694 IGHV1-24A0A0C4DH33 117 aa14□□□□□ -0.17
CHTOP-204ENST00000368694 SYS1-DBNDD2H3BUS1 97 aa14□□□□□ -0.17
CHTOP-204ENST00000368694 SAMD5Q5TGI4 173 aa14□□□□□ -0.17
CHTOP-204ENST00000368694 SUMO4Q6EEV6 95 aa14□□□□□ -0.17
CHTOP-204ENST00000368694 POM121L12Q8N7R1 296 aa14□□□□□ -0.17
CHTOP-204ENST00000368694 NRACQ8N912 160 aa14□□□□□ -0.17
CHTOP-204ENST00000368694 RASL10AQ92737 203 aa13.99□□□□□ -0.17
CHTOP-204ENST00000368694 IGHV3-73A0A0B4J1V6 119 aa13.99□□□□□ -0.17
CHTOP-204ENST00000368694 PLAC8L1A1L4L8 177 aa13.99□□□□□ -0.17
CHTOP-204ENST00000368694 LEPROTL1O95214 131 aa13.99□□□□□ -0.17
CHTOP-204ENST00000368694 ANKRD39Q53RE8 183 aa13.99□□□□□ -0.17
CHTOP-204ENST00000368694 RPL39LQ96EH5 51 aaKnown RBP13.99□□□□□ -0.17
CHTOP-204ENST00000368694 NACAE9PAV3 2078 aa13.98□□□□□ -0.17
CHTOP-204ENST00000368694 HSBP1L1C9JCN9 74 aa13.98□□□□□ -0.17
CHTOP-204ENST00000368694 EMP1P54849 157 aa13.98□□□□□ -0.17
CHTOP-204ENST00000368694 VAMP3Q15836 100 aa13.98□□□□□ -0.17
CHTOP-204ENST00000368694 CFAP126Q5VTH2 177 aa13.98□□□□□ -0.17
CHTOP-204ENST00000368694 AP5S1Q9NUS5 200 aa13.98□□□□□ -0.17
CHTOP-204ENST00000368694 DAZ2Q13117 558 aaKnown RBP13.97□□□□□ -0.17
CHTOP-204ENST00000368694 Q6ZTI0 123 aa13.97□□□□□ -0.17
CHTOP-204ENST00000368694 SLC25A34Q6PIV7 304 aa13.97□□□□□ -0.17
CHTOP-204ENST00000368694 X6R8D5 127 aa13.97□□□□□ -0.17
CHTOP-204ENST00000368694 LGALS9BQ3B8N2 356 aa13.96□□□□□ -0.17
CHTOP-204ENST00000368694 MPV17L2Q567V2 206 aa13.96□□□□□ -0.17
CHTOP-204ENST00000368694 SMIM9A6NGZ8 99 aa13.95□□□□□ -0.18
CHTOP-204ENST00000368694 PPP1R17O96001 155 aa13.95□□□□□ -0.18
CHTOP-204ENST00000368694 hDV102S1A0JD36 115 aa13.95□□□□□ -0.18
CHTOP-204ENST00000368694 PET117Q6UWS5 81 aa13.95□□□□□ -0.18
CHTOP-204ENST00000368694 OR11H2Q8NH07 326 aa13.95□□□□□ -0.18
CHTOP-204ENST00000368694 MAP1LC3CQ9BXW4 147 aa13.95□□□□□ -0.18
CHTOP-204ENST00000368694 NXT2Q9NPJ8 142 aaKnown RBP13.95□□□□□ -0.18
CHTOP-204ENST00000368694 RHODO00212 210 aa13.94□□□□□ -0.18
CHTOP-204ENST00000368694 SUMO2P61956 95 aaKnown RBP13.94□□□□□ -0.18
CHTOP-204ENST00000368694 BVES-AS1Q5T3Y7 98 aa13.94□□□□□ -0.18
CHTOP-204ENST00000368694 LINC00173Q6ZV60 143 aa13.94□□□□□ -0.18
CHTOP-204ENST00000368694 TAX1BP3O14907 124 aa13.94□□□□□ -0.18
CHTOP-204ENST00000368694 RS1O15537 224 aa13.94□□□□□ -0.18
CHTOP-204ENST00000368694 UFSP1Q6NVU6 142 aa13.94□□□□□ -0.18
CHTOP-204ENST00000368694 GAGE12BA1L429 117 aa13.93□□□□□ -0.18
CHTOP-204ENST00000368694 A8MZ25 164 aa13.93□□□□□ -0.18
CHTOP-204ENST00000368694 GAGE7O76087 117 aa13.93□□□□□ -0.18
CHTOP-204ENST00000368694 NUDT3O95989 172 aa13.93□□□□□ -0.18
CHTOP-204ENST00000368694 GAGE12FP0CL80 117 aa13.93□□□□□ -0.18
CHTOP-204ENST00000368694 GAGE12GP0CL81 117 aa13.93□□□□□ -0.18
CHTOP-204ENST00000368694 GAGE12IP0CL82 117 aa13.93□□□□□ -0.18
CHTOP-204ENST00000368694 OVOL2Q9BRP0 275 aa13.93□□□□□ -0.18
CHTOP-204ENST00000368694 TP73-AS1Q9UF72 201 aa13.93□□□□□ -0.18
CHTOP-204ENST00000368694 HSPB8Q9UJY1 196 aa13.93□□□□□ -0.18
CHTOP-204ENST00000368694 NBEAL2Q6ZNJ1 2754 aa13.92□□□□□ -0.18
CHTOP-204ENST00000368694 TRGV2A0A075B6R0 118 aa13.92□□□□□ -0.18
CHTOP-204ENST00000368694 M0QY20 66 aa13.92□□□□□ -0.18
CHTOP-204ENST00000368694 C20orf78Q9BR46 151 aa13.92□□□□□ -0.18
CHTOP-204ENST00000368694 COTL1Q14019 142 aa13.92□□□□□ -0.18
CHTOP-204ENST00000368694 Q8N8P6 123 aa13.92□□□□□ -0.18
CHTOP-204ENST00000368694 SMIM2Q9BVW6 85 aa13.92□□□□□ -0.18
CHTOP-204ENST00000368694 PRSS47A8MTI9 375 aa13.91□□□□□ -0.18
CHTOP-204ENST00000368694 H7C1H1 209 aa13.91□□□□□ -0.18
CHTOP-204ENST00000368694 IGHV3-53P01767 116 aa13.91□□□□□ -0.18
CHTOP-204ENST00000368694 RNF183Q96D59 192 aa13.91□□□□□ -0.18
CHTOP-204ENST00000368694 TRAV4A0A0B4J268 109 aa13.9□□□□□ -0.18
CHTOP-204ENST00000368694 ZFP2Q6ZN57 461 aa13.9□□□□□ -0.18
CHTOP-204ENST00000368694 ZNF479Q96JC4 524 aa13.9□□□□□ -0.18
CHTOP-204ENST00000368694 IGLV2-18A0A075B6J9 118 aa13.89□□□□□ -0.19
CHTOP-204ENST00000368694 PRB2P02812 416 aaPredicted RBP13.89□□□□□ -0.19
CHTOP-204ENST00000368694 RNF151Q2KHN1 245 aa13.89□□□□□ -0.19
CHTOP-204ENST00000368694 IGHV4-28A0A0C4DH34 117 aa13.88□□□□□ -0.19
CHTOP-204ENST00000368694 DEFB4AO15263 64 aa13.88□□□□□ -0.19
CHTOP-204ENST00000368694 P0DMU3 169 aa13.88□□□□□ -0.19
CHTOP-204ENST00000368694 FAM231AP0DMU4 169 aa13.88□□□□□ -0.19
CHTOP-204ENST00000368694 FAM231CP0DMU5 169 aa13.88□□□□□ -0.19
CHTOP-204ENST00000368694 Q6ZSN1 163 aa13.88□□□□□ -0.19
CHTOP-204ENST00000368694 DEFB130BP0DP73 79 aa13.87□□□□□ -0.19
CHTOP-204ENST00000368694 DEFB130AP0DP74 79 aa13.87□□□□□ -0.19
CHTOP-204ENST00000368694 MIFP14174 115 aa13.87□□□□□ -0.19
CHTOP-204ENST00000368694 LINC01545Q5VT33 79 aa13.87□□□□□ -0.19
CHTOP-204ENST00000368694 ERASQ7Z444 233 aa13.87□□□□□ -0.19
CHTOP-204ENST00000368694 PMCHL2Q9BQD1 86 aa13.87□□□□□ -0.19
CHTOP-204ENST00000368694 SDHAF1A6NFY7 115 aa13.87□□□□□ -0.19
CHTOP-204ENST00000368694 NEGR1Q7Z3B1 354 aa13.87□□□□□ -0.19
CHTOP-204ENST00000368694 EDA2RQ9HAV5 297 aa13.87□□□□□ -0.19
CHTOP-204ENST00000368694 DNAH3Q8TD57 4116 aa13.87□□□□□ -0.19
CHTOP-204ENST00000368694 TRBV6-5A0A0K0K1A5 114 aa13.86□□□□□ -0.19
CHTOP-204ENST00000368694 LINC01546A6NGU7 62 aa13.86□□□□□ -0.19
CHTOP-204ENST00000368694 H0Y8G0 127 aa13.86□□□□□ -0.19
CHTOP-204ENST00000368694 HBDP02042 147 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms