RNA–Protein interactions for RNA: ENST00000368453.8

SHC1-205, Transcript of SHC adaptor protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHC1, Length 3,062 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-205ENST00000368453 IGHV3-30-3P0DP02 117 aa11.22□□□□□ -0.61
SHC1-205ENST00000368453 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.21□□□□□ -0.611e-6■■■■□ 25.8
SHC1-205ENST00000368453 NACAE9PAV3 2078 aa11.21□□□□□ -0.61
SHC1-205ENST00000368453 TLN1Q9Y490 2541 aaKnown RBP11.21□□□□□ -0.61
SHC1-205ENST00000368453 A0A0U1RRA0 63 aa11.21□□□□□ -0.61
SHC1-205ENST00000368453 PRR30Q53SZ7 412 aaPredicted RBP11.21□□□□□ -0.61
SHC1-205ENST00000368453 C9orf153Q5TBE3 101 aa11.21□□□□□ -0.61
SHC1-205ENST00000368453 TMEM101Q96IK0 257 aa11.21□□□□□ -0.61
SHC1-205ENST00000368453 DUX5Q96PT3 197 aa11.21□□□□□ -0.61
SHC1-205ENST00000368453 TNFRSF18Q9Y5U5 241 aa11.21□□□□□ -0.61
SHC1-205ENST00000368453 IGHV4OR15-8A0A075B7B6 117 aa11.21□□□□□ -0.62
SHC1-205ENST00000368453 A0A087WW49 117 aa11.21□□□□□ -0.62
SHC1-205ENST00000368453 ITLN2Q8WWU7 325 aaPredicted RBP11.21□□□□□ -0.62
SHC1-205ENST00000368453 VPREB3Q9UKI3 123 aa11.21□□□□□ -0.62
SHC1-205ENST00000368453 KIF25-AS1Q9Y6Z4 181 aa11.21□□□□□ -0.62
SHC1-205ENST00000368453 ADAMTSL4-AS1Q5T5F5 129 aa11.2□□□□□ -0.62
SHC1-205ENST00000368453 YAE1D1Q9NRH1 226 aa11.2□□□□□ -0.62
SHC1-205ENST00000368453 MDFICQ9P1T7 246 aa11.2□□□□□ -0.62
SHC1-205ENST00000368453 GRNP28799 593 aaKnown RBP11.2□□□□□ -0.62
SHC1-205ENST00000368453 CEMP1Q6PRD7 247 aaPredicted RBP11.2□□□□□ -0.62
SHC1-205ENST00000368453 TTC28Q96AY4 2481 aa11.2□□□□□ -0.62
SHC1-205ENST00000368453 HTN1P15515 57 aa11.2□□□□□ -0.62
SHC1-205ENST00000368453 OTOGLQ3ZCN5 2332 aa11.19□□□□□ -0.62
SHC1-205ENST00000368453 IGHV3OR16-10A0A075B7F0 116 aa11.19□□□□□ -0.62
SHC1-205ENST00000368453 CD28P10747 220 aa11.19□□□□□ -0.62
SHC1-205ENST00000368453 NDUFA12Q9UI09 145 aa11.19□□□□□ -0.62
SHC1-205ENST00000368453 TRAV12-2A0A075B6T6 113 aa11.18□□□□□ -0.62
SHC1-205ENST00000368453 IGHV3-73A0A0B4J1V6 119 aa11.18□□□□□ -0.62
SHC1-205ENST00000368453 TRBV27A0A0K0K1C4 114 aa11.18□□□□□ -0.62
SHC1-205ENST00000368453 H3BT86 120 aa11.18□□□□□ -0.62
SHC1-205ENST00000368453 I3L3M4 83 aa11.18□□□□□ -0.62
SHC1-205ENST00000368453 LINC00694P0DN24 101 aa11.18□□□□□ -0.62
SHC1-205ENST00000368453 MRPL23Q16540 153 aaKnown RBP11.18□□□□□ -0.62
SHC1-205ENST00000368453 U3KQE9 123 aa11.18□□□□□ -0.62
SHC1-205ENST00000368453 OOSP1A8MZH6 123 aa11.18□□□□□ -0.62
SHC1-205ENST00000368453 MINOS1Q5TGZ0 78 aa11.18□□□□□ -0.62
SHC1-205ENST00000368453 TMEM126AQ9H061 195 aa11.17□□□□□ -0.62
SHC1-205ENST00000368453 SPANXA1Q9NS26 97 aa11.17□□□□□ -0.62
SHC1-205ENST00000368453 DOPEY2Q9Y3R5 2298 aa11.17□□□□□ -0.62
SHC1-205ENST00000368453 MED14OSP0DP75 135 aa11.17□□□□□ -0.62
SHC1-205ENST00000368453 ZFP36P26651 326 aaKnown RBP11.17□□□□□ -0.62
SHC1-205ENST00000368453 SAA4P35542 130 aa11.17□□□□□ -0.62
SHC1-205ENST00000368453 EBI3Q14213 229 aa11.17□□□□□ -0.62
SHC1-205ENST00000368453 MINOS1-NBL1R4GNA1 71 aa11.17□□□□□ -0.62
SHC1-205ENST00000368453 LOC107984640A0A0U1RRK4 108 aa11.16□□□□□ -0.62
SHC1-205ENST00000368453 IGLV4-3A0A075B6K6 122 aa11.16□□□□□ -0.62
SHC1-205ENST00000368453 C20orf203Q8NBC4 194 aa11.16□□□□□ -0.62
SHC1-205ENST00000368453 LINC01587Q99440 93 aa11.16□□□□□ -0.62
SHC1-205ENST00000368453 UBTD1Q9HAC8 227 aa11.16□□□□□ -0.62
SHC1-205ENST00000368453 KLK9Q9UKQ9 250 aa11.16□□□□□ -0.62
SHC1-205ENST00000368453 KLK5Q9Y337 293 aaPredicted RBP11.16□□□□□ -0.62
SHC1-205ENST00000368453 ZNF625Q96I27 306 aaPredicted RBP11.15□□□□□ -0.62
SHC1-205ENST00000368453 TRAV41A0A0B4J266 112 aa11.15□□□□□ -0.62
SHC1-205ENST00000368453 RHPN1-AS1Q9BWJ2 59 aa11.15□□□□□ -0.62
SHC1-205ENST00000368453 IGHV1-69P01742 117 aa11.15□□□□□ -0.63
SHC1-205ENST00000368453 M0QY20 66 aa11.14□□□□□ -0.63
SHC1-205ENST00000368453 LST1O00453 97 aa11.14□□□□□ -0.63
SHC1-205ENST00000368453 NOTCH3Q9UM47 2321 aa11.14□□□□□ -0.63
SHC1-205ENST00000368453 PF4V1P10720 104 aa11.13□□□□□ -0.63
SHC1-205ENST00000368453 AKAP13Q12802 2813 aa11.13□□□□□ -0.63
SHC1-205ENST00000368453 RS1O15537 224 aa11.12□□□□□ -0.63
SHC1-205ENST00000368453 RHOHQ15669 191 aa11.12□□□□□ -0.63
SHC1-205ENST00000368453 LITAFQ99732 161 aa11.12□□□□□ -0.63
SHC1-205ENST00000368453 MIAQ16674 131 aa11.11□□□□□ -0.63
SHC1-205ENST00000368453 EDA2RQ9HAV5 297 aa11.11□□□□□ -0.63
SHC1-205ENST00000368453 SOCS3O14543 225 aa11.11□□□□□ -0.63
SHC1-205ENST00000368453 EDN2P20800 178 aa11.11□□□□□ -0.63
SHC1-205ENST00000368453 NSUN5P1Q3KNT7 163 aa11.11□□□□□ -0.63
SHC1-205ENST00000368453 POM121L12Q8N7R1 296 aa11.11□□□□□ -0.63
SHC1-205ENST00000368453 TRBV7-7A0A0K0K1E9 115 aa11.1□□□□□ -0.63
SHC1-205ENST00000368453 FAM240AA0A1B0GVK7 77 aa11.1□□□□□ -0.63
SHC1-205ENST00000368453 HERVK_113P63121 156 aa11.1□□□□□ -0.63
SHC1-205ENST00000368453 LY6EQ16553 131 aa11.1□□□□□ -0.63
SHC1-205ENST00000368453 C2CD3Q4AC94 2353 aa11.1□□□□□ -0.63
SHC1-205ENST00000368453 IGHV1-58A0A0C4DH39 117 aa11.1□□□□□ -0.63
SHC1-205ENST00000368453 TRBV6-5A0A0K0K1A5 114 aa11.1□□□□□ -0.63
SHC1-205ENST00000368453 NXPH4O95158 308 aa11.1□□□□□ -0.63
SHC1-205ENST00000368453 TMEM61Q8N0U2 210 aa11.1□□□□□ -0.63
SHC1-205ENST00000368453 ZFHX2Q9C0A1 2572 aaPredicted RBP11.1□□□□□ -0.63
SHC1-205ENST00000368453 A0A0J9YX75 114 aa11.1□□□□□ -0.63
SHC1-205ENST00000368453 NPFFO15130 113 aa11.1□□□□□ -0.63
SHC1-205ENST00000368453 KNCNA6PVL3 124 aa11.09□□□□□ -0.63
SHC1-205ENST00000368453 C3orf22Q8N5N4 141 aa11.09□□□□□ -0.63
SHC1-205ENST00000368453 NDUFA4O00483 81 aa11.09□□□□□ -0.63
SHC1-205ENST00000368453 NDUFA7O95182 113 aa11.09□□□□□ -0.63
SHC1-205ENST00000368453 KLRB1Q12918 225 aa11.09□□□□□ -0.63
SHC1-205ENST00000368453 SPINK13Q1W4C9 94 aa11.09□□□□□ -0.63
SHC1-205ENST00000368453 DEFB123Q8N688 67 aa11.09□□□□□ -0.63
SHC1-205ENST00000368453 ATP5J2P56134 94 aa11.08□□□□□ -0.64
SHC1-205ENST00000368453 PROK1P58294 105 aa11.08□□□□□ -0.64
SHC1-205ENST00000368453 C5orf56Q8N8D9 126 aa11.08□□□□□ -0.64
SHC1-205ENST00000368453 FAM19A4Q96LR4 140 aa11.08□□□□□ -0.64
SHC1-205ENST00000368453 KLLNB2CW77 178 aa11.07□□□□□ -0.64
SHC1-205ENST00000368453 GAGE2AQ6NT46 116 aa11.07□□□□□ -0.64
SHC1-205ENST00000368453 Q8NA96 180 aa11.07□□□□□ -0.64
SHC1-205ENST00000368453 SMCR5Q8TEV8 140 aa11.07□□□□□ -0.64
SHC1-205ENST00000368453 SIRPDQ9H106 197 aa11.07□□□□□ -0.64
SHC1-205ENST00000368453 IGHV3-16A0A0C4DH30 117 aa11.07□□□□□ -0.64
SHC1-205ENST00000368453 FAM223BA6NKX1 122 aa11.07□□□□□ -0.64
SHC1-205ENST00000368453 FAM223AQ8IWN6 122 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms