RNA–Protein interactions for RNA: ENST00000366822.2

LINC01558-201, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2

Gene LINC01558, Length 1,173 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-201ENST00000366822 GAS8-AS1O95177 125 aa12.22□□□□□ -0.45
LINC01558-201ENST00000366822 LINC00694P0DN24 101 aa12.22□□□□□ -0.45
LINC01558-201ENST00000366822 C15orf53Q8NAA6 179 aa12.22□□□□□ -0.45
LINC01558-201ENST00000366822 NEXN-AS1Q8NBZ9 246 aa12.22□□□□□ -0.45
LINC01558-201ENST00000366822 DNAJC30Q96LL9 226 aa12.22□□□□□ -0.45
LINC01558-201ENST00000366822 SACSQ9NZJ4 4579 aa12.21□□□□□ -0.45
LINC01558-201ENST00000366822 SMKR1H3BMG3 65 aa12.21□□□□□ -0.45
LINC01558-201ENST00000366822 APCSP02743 223 aa12.21□□□□□ -0.45
LINC01558-201ENST00000366822 NIT2Q9NQR4 276 aa12.21□□□□□ -0.45
LINC01558-201ENST00000366822 ICOSQ9Y6W8 199 aa12.21□□□□□ -0.45
LINC01558-201ENST00000366822 TENM2Q9NT68 2774 aa12.2□□□□□ -0.46
LINC01558-201ENST00000366822 A0A096LPF7 62 aa12.2□□□□□ -0.46
LINC01558-201ENST00000366822 GAGE12JA6NER3 117 aa12.2□□□□□ -0.46
LINC01558-201ENST00000366822 NCR2O95944 276 aa12.2□□□□□ -0.46
LINC01558-201ENST00000366822 PPBPP02775 128 aa12.2□□□□□ -0.46
LINC01558-201ENST00000366822 CKS2P33552 79 aa12.2□□□□□ -0.46
LINC01558-201ENST00000366822 TCTAP57738 103 aa12.2□□□□□ -0.46
LINC01558-201ENST00000366822 RPL36AP83881 106 aaKnown RBP12.2□□□□□ -0.46
LINC01558-201ENST00000366822 GAGE1Q13065 139 aa12.2□□□□□ -0.46
LINC01558-201ENST00000366822 GAGE4Q13068 117 aa12.2□□□□□ -0.46
LINC01558-201ENST00000366822 GAGE5Q13069 117 aa12.2□□□□□ -0.46
LINC01558-201ENST00000366822 MRPL23Q16540 153 aaKnown RBP12.2□□□□□ -0.46
LINC01558-201ENST00000366822 GAGE13Q4V321 117 aa12.2□□□□□ -0.46
LINC01558-201ENST00000366822 RPL36ALQ969Q0 106 aaKnown RBP12.2□□□□□ -0.46
LINC01558-201ENST00000366822 RPL39LQ96EH5 51 aaKnown RBP12.2□□□□□ -0.46
LINC01558-201ENST00000366822 MRPL18Q9H0U6 180 aaKnown RBP12.2□□□□□ -0.46
LINC01558-201ENST00000366822 APLNQ9ULZ1 77 aa12.2□□□□□ -0.46
LINC01558-201ENST00000366822 RYR3Q15413 4870 aa12.2□□□□□ -0.46
LINC01558-201ENST00000366822 TRBV7-3A0A075B6L6 115 aa12.19□□□□□ -0.46
LINC01558-201ENST00000366822 D6R8Y8 96 aa12.19□□□□□ -0.46
LINC01558-201ENST00000366822 NUDT3O95989 172 aa12.19□□□□□ -0.46
LINC01558-201ENST00000366822 RPS10P46783 165 aaKnown RBP12.19□□□□□ -0.46
LINC01558-201ENST00000366822 ORMDL3Q8N138 153 aa12.19□□□□□ -0.46
LINC01558-201ENST00000366822 NRACQ8N912 160 aa12.19□□□□□ -0.46
LINC01558-201ENST00000366822 ZNRF2Q8NHG8 242 aa12.19□□□□□ -0.46
LINC01558-201ENST00000366822 TRAPPC1Q9Y5R8 145 aa12.19□□□□□ -0.46
LINC01558-201ENST00000366822 LYSTQ99698 3801 aa12.18□□□□□ -0.46
LINC01558-201ENST00000366822 TRBV6-5A0A0K0K1A5 114 aa12.18□□□□□ -0.46
LINC01558-201ENST00000366822 PPP1R17O96001 155 aa12.18□□□□□ -0.46
LINC01558-201ENST00000366822 SRIP30626 198 aa12.18□□□□□ -0.46
LINC01558-201ENST00000366822 UBE2D3P61077 147 aa12.18□□□□□ -0.46
LINC01558-201ENST00000366822 UBE2D2P62837 147 aa12.18□□□□□ -0.46
LINC01558-201ENST00000366822 OR10J3Q5JRS4 329 aa12.18□□□□□ -0.46
LINC01558-201ENST00000366822 TNFRSF18Q9Y5U5 241 aa12.18□□□□□ -0.46
LINC01558-201ENST00000366822 PLECQ15149 4684 aaKnown RBP12.17□□□□□ -0.46
LINC01558-201ENST00000366822 RAB5AP20339 215 aa12.17□□□□□ -0.46
LINC01558-201ENST00000366822 FABP9Q0Z7S8 132 aa12.17□□□□□ -0.46
LINC01558-201ENST00000366822 KIAA1644Q3SXP7 199 aa12.17□□□□□ -0.46
LINC01558-201ENST00000366822 SH2D6Q7Z4S9 175 aa12.17□□□□□ -0.46
LINC01558-201ENST00000366822 LCE6AA0A183 80 aa12.16□□□□□ -0.46
LINC01558-201ENST00000366822 PRELID3AQ96N28 172 aa12.16□□□□□ -0.46
LINC01558-201ENST00000366822 ALMS1Q8TCU4 4167 aa12.15□□□□□ -0.46
LINC01558-201ENST00000366822 PHOX2AO14813 284 aa12.15□□□□□ -0.46
LINC01558-201ENST00000366822 TNFRSF6BO95407 300 aa12.15□□□□□ -0.46
LINC01558-201ENST00000366822 NPYP01303 97 aa12.15□□□□□ -0.46
LINC01558-201ENST00000366822 NEGR1Q7Z3B1 354 aa12.15□□□□□ -0.46
LINC01558-201ENST00000366822 ATP6V0E2Q8NHE4 81 aa12.15□□□□□ -0.46
LINC01558-201ENST00000366822 ST20Q9HBF5 79 aa12.15□□□□□ -0.46
LINC01558-201ENST00000366822 LAMTOR2Q9Y2Q5 125 aa12.15□□□□□ -0.46
LINC01558-201ENST00000366822 DAZ4Q86SG3 579 aaKnown RBP12.14□□□□□ -0.47
LINC01558-201ENST00000366822 C20orf78Q9BR46 151 aa12.14□□□□□ -0.47
LINC01558-201ENST00000366822 DAZ3Q9NR90 486 aaKnown RBP12.14□□□□□ -0.47
LINC01558-201ENST00000366822 DNAH1Q9P2D7 4330 aa12.14□□□□□ -0.47
LINC01558-201ENST00000366822 SDHAF1A6NFY7 115 aa12.13□□□□□ -0.47
LINC01558-201ENST00000366822 POLR2KP53803 58 aaKnown RBP12.13□□□□□ -0.47
LINC01558-201ENST00000366822 SUMO2P61956 95 aaKnown RBP12.13□□□□□ -0.47
LINC01558-201ENST00000366822 ALKBH7Q9BT30 221 aaPredicted RBP12.13□□□□□ -0.47
LINC01558-201ENST00000366822 RYR2Q92736 4967 aa12.12□□□□□ -0.47
LINC01558-201ENST00000366822 PRSS47A8MTI9 375 aa12.12□□□□□ -0.47
LINC01558-201ENST00000366822 TIRAPP58753 221 aa12.12□□□□□ -0.47
LINC01558-201ENST00000366822 RPL32P62910 135 aaKnown RBP12.12□□□□□ -0.47
LINC01558-201ENST00000366822 LYPD5Q6UWN5 251 aa12.12□□□□□ -0.47
LINC01558-201ENST00000366822 TMEM70Q9BUB7 260 aa12.12□□□□□ -0.47
LINC01558-201ENST00000366822 GTSF1LQ9H1H1 148 aa12.12□□□□□ -0.47
LINC01558-201ENST00000366822 IGHV3-38A0A0C4DH36 116 aa12.11□□□□□ -0.47
LINC01558-201ENST00000366822 TRGC2P03986 189 aa12.11□□□□□ -0.47
LINC01558-201ENST00000366822 ESRGQ1W209 222 aa12.11□□□□□ -0.47
LINC01558-201ENST00000366822 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.11□□□□□ -0.47
LINC01558-201ENST00000366822 TRBV27A0A0K0K1C4 114 aa12.1□□□□□ -0.47
LINC01558-201ENST00000366822 I3L3M4 83 aa12.09□□□□□ -0.47
LINC01558-201ENST00000366822 VCYO14598 125 aa12.09□□□□□ -0.47
LINC01558-201ENST00000366822 SMIM2Q9BVW6 85 aa12.09□□□□□ -0.47
LINC01558-201ENST00000366822 MAP1LC3AQ9H492 121 aa12.09□□□□□ -0.47
LINC01558-201ENST00000366822 PMCHP20382 165 aa12.08□□□□□ -0.48
LINC01558-201ENST00000366822 TMEM97Q5BJF2 176 aa12.08□□□□□ -0.48
LINC01558-201ENST00000366822 IGLV2-18A0A075B6J9 118 aa12.07□□□□□ -0.48
LINC01558-201ENST00000366822 CCL18P55774 89 aa12.07□□□□□ -0.48
LINC01558-201ENST00000366822 LELP1Q5T871 98 aa12.07□□□□□ -0.48
LINC01558-201ENST00000366822 NTM-AS1Q6ZSK4 140 aa12.07□□□□□ -0.48
LINC01558-201ENST00000366822 LINC00588Q9Y4M8 146 aa12.07□□□□□ -0.48
LINC01558-201ENST00000366822 LOC389332A0A1B0GUA5 103 aa12.06□□□□□ -0.48
LINC01558-201ENST00000366822 COTL1Q14019 142 aa12.06□□□□□ -0.48
LINC01558-201ENST00000366822 TRBV6-8A0A0A6YYG3 113 aa12.05□□□□□ -0.48
LINC01558-201ENST00000366822 TSHBP01222 138 aa12.05□□□□□ -0.48
LINC01558-201ENST00000366822 Q8N8P6 123 aa12.05□□□□□ -0.48
LINC01558-201ENST00000366822 C18orf32Q8TCD1 76 aa12.05□□□□□ -0.48
LINC01558-201ENST00000366822 KIR2DL4Q99706 377 aa12.05□□□□□ -0.48
LINC01558-201ENST00000366822 MRPS16Q9Y3D3 137 aaKnown RBP12.05□□□□□ -0.48
LINC01558-201ENST00000366822 IQCJQ1A5X6 159 aa12.04□□□□□ -0.48
LINC01558-201ENST00000366822 DEFB104AQ8WTQ1 72 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms