RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 SMKR1H3BMG3 65 aa8.05□□□□□ -1.12
CSNK1E-202ENST00000366216 M0R2P5 195 aa8.05□□□□□ -1.12
CSNK1E-202ENST00000366216 TNFRSF6BO95407 300 aa8.05□□□□□ -1.12
CSNK1E-202ENST00000366216 NCR2O95944 276 aa8.05□□□□□ -1.12
CSNK1E-202ENST00000366216 SMIM17P0DL12 118 aa8.05□□□□□ -1.12
CSNK1E-202ENST00000366216 RPL35AP18077 110 aaKnown RBP8.05□□□□□ -1.12
CSNK1E-202ENST00000366216 AMTP48728 403 aa8.05□□□□□ -1.12
CSNK1E-202ENST00000366216 LINC00315P59091 139 aa8.05□□□□□ -1.12
CSNK1E-202ENST00000366216 RNASEKQ6P5S7 137 aaKnown RBP8.05□□□□□ -1.12
CSNK1E-202ENST00000366216 C11orf72Q8NBR9 251 aa8.05□□□□□ -1.12
CSNK1E-202ENST00000366216 CSNK1G2-AS1Q8NCQ2 148 aa8.05□□□□□ -1.12
CSNK1E-202ENST00000366216 PRSS3P2Q8NHM4 247 aa8.05□□□□□ -1.12
CSNK1E-202ENST00000366216 TMEM208Q9BTX3 173 aa8.05□□□□□ -1.12
CSNK1E-202ENST00000366216 NDUFAF3Q9BU61 184 aa8.05□□□□□ -1.12
CSNK1E-202ENST00000366216 MAP1LC3AQ9H492 121 aa8.05□□□□□ -1.12
CSNK1E-202ENST00000366216 LINC01546A6NGU7 62 aa8.04□□□□□ -1.12
CSNK1E-202ENST00000366216 PPP1R17O96001 155 aa8.04□□□□□ -1.12
CSNK1E-202ENST00000366216 HTN1P15515 57 aa8.04□□□□□ -1.12
CSNK1E-202ENST00000366216 ZNF876PQ49A33 203 aa8.04□□□□□ -1.12
CSNK1E-202ENST00000366216 FA2HQ7L5A8 372 aa8.04□□□□□ -1.12
CSNK1E-202ENST00000366216 NRACQ8N912 160 aa8.04□□□□□ -1.12
CSNK1E-202ENST00000366216 CSTL1Q9H114 145 aa8.04□□□□□ -1.12
CSNK1E-202ENST00000366216 AP5S1Q9NUS5 200 aa8.04□□□□□ -1.12
CSNK1E-202ENST00000366216 GAS8-AS1O95177 125 aa8.03□□□□□ -1.12
CSNK1E-202ENST00000366216 CRYGDP07320 174 aa8.03□□□□□ -1.12
CSNK1E-202ENST00000366216 IFI27P40305 119 aaPredicted RBP8.03□□□□□ -1.12
CSNK1E-202ENST00000366216 JOSD1Q15040 202 aaPredicted RBP8.03□□□□□ -1.12
CSNK1E-202ENST00000366216 PYY3Q5JQD4 70 aa8.03□□□□□ -1.12
CSNK1E-202ENST00000366216 ZNF705AQ6ZN79 300 aaPredicted RBP8.03□□□□□ -1.12
CSNK1E-202ENST00000366216 RNASE8Q8TDE3 154 aaKnown RBP8.03□□□□□ -1.12
CSNK1E-202ENST00000366216 TMEM263Q8WUH6 116 aaKnown RBP8.03□□□□□ -1.12
CSNK1E-202ENST00000366216 PHLDA1Q8WV24 401 aaPredicted RBP8.03□□□□□ -1.12
CSNK1E-202ENST00000366216 C20orf78Q9BR46 151 aa8.03□□□□□ -1.12
CSNK1E-202ENST00000366216 NXT2Q9NPJ8 142 aaKnown RBP8.03□□□□□ -1.12
CSNK1E-202ENST00000366216 TRAV26-2A0A0B4J265 109 aa8.02□□□□□ -1.13
CSNK1E-202ENST00000366216 KIR2DL5BA0A0G2JN68 375 aa8.02□□□□□ -1.13
CSNK1E-202ENST00000366216 KIR2DL5BA0A0G2JPC4 375 aa8.02□□□□□ -1.13
CSNK1E-202ENST00000366216 LOC389332A0A1B0GUA5 103 aa8.02□□□□□ -1.13
CSNK1E-202ENST00000366216 A8MWV9 139 aa8.02□□□□□ -1.13
CSNK1E-202ENST00000366216 PRM2P04554 102 aa8.02□□□□□ -1.13
CSNK1E-202ENST00000366216 MGPP08493 103 aa8.02□□□□□ -1.13
CSNK1E-202ENST00000366216 GATA1P15976 413 aaPredicted RBP8.02□□□□□ -1.13
CSNK1E-202ENST00000366216 AZU1P20160 251 aa8.02□□□□□ -1.13
CSNK1E-202ENST00000366216 Q6ZWC4 215 aa8.02□□□□□ -1.13
CSNK1E-202ENST00000366216 KIR2DL5AQ8N109 375 aa8.02□□□□□ -1.13
CSNK1E-202ENST00000366216 FAM19A2Q8N3H0 131 aa8.02□□□□□ -1.13
CSNK1E-202ENST00000366216 Q8N8P6 123 aa8.02□□□□□ -1.13
CSNK1E-202ENST00000366216 KIR2DL5BQ8NHK3 375 aa8.02□□□□□ -1.13
CSNK1E-202ENST00000366216 RASL10AQ92737 203 aa8.02□□□□□ -1.13
CSNK1E-202ENST00000366216 JPT2Q9H910 190 aa8.02□□□□□ -1.13
CSNK1E-202ENST00000366216 IGLV2-18A0A075B6J9 118 aa8.01□□□□□ -1.13
CSNK1E-202ENST00000366216 IGHV3OR16-12A0A075B7B8 117 aa8.01□□□□□ -1.13
CSNK1E-202ENST00000366216 A0A087WWL8 130 aa8.01□□□□□ -1.13
CSNK1E-202ENST00000366216 IGHV1-24A0A0C4DH33 117 aa8.01□□□□□ -1.13
CSNK1E-202ENST00000366216 SUMO4Q6EEV6 95 aa8.01□□□□□ -1.13
CSNK1E-202ENST00000366216 C16orf74Q96GX8 76 aa8.01□□□□□ -1.13
CSNK1E-202ENST00000366216 C12orf57Q99622 126 aa8.01□□□□□ -1.13
CSNK1E-202ENST00000366216 LRP1BQ9NZR2 4599 aa8□□□□□ -1.13
CSNK1E-202ENST00000366216 RPL32P62910 135 aaKnown RBP8□□□□□ -1.13
CSNK1E-202ENST00000366216 DAZ2Q13117 558 aaKnown RBP8□□□□□ -1.13
CSNK1E-202ENST00000366216 LGALS9BQ3B8N2 356 aa8□□□□□ -1.13
CSNK1E-202ENST00000366216 LCE2CQ5TA81 110 aa8□□□□□ -1.13
CSNK1E-202ENST00000366216 TRBV6-5A0A0K0K1A5 114 aa7.99□□□□□ -1.13
CSNK1E-202ENST00000366216 F5H697 171 aa7.99□□□□□ -1.13
CSNK1E-202ENST00000366216 K7EMI3 77 aa7.99□□□□□ -1.13
CSNK1E-202ENST00000366216 RHODO00212 210 aa7.99□□□□□ -1.13
CSNK1E-202ENST00000366216 RS1O15537 224 aa7.99□□□□□ -1.13
CSNK1E-202ENST00000366216 APOC4P55056 127 aa7.99□□□□□ -1.13
CSNK1E-202ENST00000366216 SUMO2P61956 95 aaKnown RBP7.99□□□□□ -1.13
CSNK1E-202ENST00000366216 RRN3P1Q2M238 152 aa7.99□□□□□ -1.13
CSNK1E-202ENST00000366216 UFSP1Q6NVU6 142 aa7.99□□□□□ -1.13
CSNK1E-202ENST00000366216 SMIM2Q9BVW6 85 aa7.99□□□□□ -1.13
CSNK1E-202ENST00000366216 TP53TG1Q9Y2A0 90 aa7.99□□□□□ -1.13
CSNK1E-202ENST00000366216 DMBT1Q9UGM3 2413 aaPredicted RBP7.98□□□□□ -1.13
CSNK1E-202ENST00000366216 PLAC8L1A1L4L8 177 aa7.98□□□□□ -1.13
CSNK1E-202ENST00000366216 SMIM9A6NGZ8 99 aa7.98□□□□□ -1.13
CSNK1E-202ENST00000366216 M0QY20 66 aa7.98□□□□□ -1.13
CSNK1E-202ENST00000366216 LEPROTL1O95214 131 aa7.98□□□□□ -1.13
CSNK1E-202ENST00000366216 ZNF56Q15929 161 aa7.98□□□□□ -1.13
CSNK1E-202ENST00000366216 PMCHL1Q16048 86 aa7.98□□□□□ -1.13
CSNK1E-202ENST00000366216 FAM74A4Q5TZK3 123 aa7.98□□□□□ -1.13
CSNK1E-202ENST00000366216 CFAP126Q5VTH2 177 aa7.98□□□□□ -1.13
CSNK1E-202ENST00000366216 RPL39LQ96EH5 51 aaKnown RBP7.98□□□□□ -1.13
CSNK1E-202ENST00000366216 HSPB8Q9UJY1 196 aa7.98□□□□□ -1.13
CSNK1E-202ENST00000366216 A0A096LNJ9 63 aa7.97□□□□□ -1.13
CSNK1E-202ENST00000366216 PRSS29PA6NIE9 313 aa7.97□□□□□ -1.13
CSNK1E-202ENST00000366216 H7C1H1 209 aa7.97□□□□□ -1.13
CSNK1E-202ENST00000366216 HBDP02042 147 aa7.97□□□□□ -1.13
CSNK1E-202ENST00000366216 C3orf79P0CE67 100 aa7.97□□□□□ -1.13
CSNK1E-202ENST00000366216 FCER1GP30273 86 aa7.97□□□□□ -1.13
CSNK1E-202ENST00000366216 DEFB135Q30KP9 77 aa7.97□□□□□ -1.13
CSNK1E-202ENST00000366216 ZFP2Q6ZN57 461 aa7.97□□□□□ -1.13
CSNK1E-202ENST00000366216 RNF183Q96D59 192 aa7.97□□□□□ -1.13
CSNK1E-202ENST00000366216 ST20Q9HBF5 79 aa7.97□□□□□ -1.13
CSNK1E-202ENST00000366216 MRPL16Q9NX20 251 aaKnown RBP7.97□□□□□ -1.13
CSNK1E-202ENST00000366216 NACAE9PAV3 2078 aa7.97□□□□□ -1.13
CSNK1E-202ENST00000366216 APOBP04114 4563 aaKnown RBP7.97□□□□□ -1.13
CSNK1E-202ENST00000366216 CIDEAO60543 219 aa7.96□□□□□ -1.14
CSNK1E-202ENST00000366216 BTF3P20290 206 aaKnown RBP7.96□□□□□ -1.14
CSNK1E-202ENST00000366216 POLR2KP53803 58 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms