RNA–Protein interactions for RNA: ENST00000359979.8

CCSER2-202, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 1 (best) BASIC

Gene CCSER2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-202ENST00000359979 TSSC4Q9Y5U2 329 aaPredicted RBP16.55■□□□□ 0.24
CCSER2-202ENST00000359979 ELANEP08246 267 aa16.54■□□□□ 0.24
CCSER2-202ENST00000359979 P0DMU3 169 aa16.54■□□□□ 0.24
CCSER2-202ENST00000359979 FAM231AP0DMU4 169 aa16.54■□□□□ 0.24
CCSER2-202ENST00000359979 FAM231CP0DMU5 169 aa16.54■□□□□ 0.24
CCSER2-202ENST00000359979 LGALS3P17931 250 aaKnown RBP16.54■□□□□ 0.24
CCSER2-202ENST00000359979 EDA2RQ9HAV5 297 aa16.54■□□□□ 0.24
CCSER2-202ENST00000359979 TMEM223A0PJW6 202 aa16.53■□□□□ 0.24
CCSER2-202ENST00000359979 LEPROTO15243 131 aa16.53■□□□□ 0.24
CCSER2-202ENST00000359979 APOMO95445 188 aa16.52■□□□□ 0.24
CCSER2-202ENST00000359979 MTURNQ8N3F0 131 aa16.52■□□□□ 0.24
CCSER2-202ENST00000359979 LOC107984156A0A0G2JMH3 177 aa16.51■□□□□ 0.23
CCSER2-202ENST00000359979 ARL17AQ8IVW1 177 aa16.51■□□□□ 0.23
CCSER2-202ENST00000359979 UBE2E2Q96LR5 201 aa16.51■□□□□ 0.23
CCSER2-202ENST00000359979 UBR5O95071 2799 aaPredicted RBP16.5■□□□□ 0.23
CCSER2-202ENST00000359979 CFC1BP0CG36 223 aa16.5■□□□□ 0.23
CCSER2-202ENST00000359979 CFC1P0CG37 223 aa16.5■□□□□ 0.23
CCSER2-202ENST00000359979 VPREB3Q9UKI3 123 aa16.5■□□□□ 0.23
CCSER2-202ENST00000359979 USP9XQ93008 2570 aaPredicted RBP16.5■□□□□ 0.23
CCSER2-202ENST00000359979 HOXD3P31249 432 aaPredicted RBP16.5■□□□□ 0.23
CCSER2-202ENST00000359979 C10orf126Q8N4M7 172 aa16.5■□□□□ 0.23
CCSER2-202ENST00000359979 C1QTNF4Q9BXJ3 329 aa16.5■□□□□ 0.23
CCSER2-202ENST00000359979 TRBV20-1A0A075B6N2 111 aa16.49■□□□□ 0.23
CCSER2-202ENST00000359979 AZU1P20160 251 aa16.49■□□□□ 0.23
CCSER2-202ENST00000359979 PSMB2P49721 201 aa16.49■□□□□ 0.23
CCSER2-202ENST00000359979 OPRPNQ99935 248 aaPredicted RBP16.49■□□□□ 0.23
CCSER2-202ENST00000359979 SMCPP49901 116 aaPredicted RBP16.49■□□□□ 0.23
CCSER2-202ENST00000359979 A0A096LNT2 108 aa16.48■□□□□ 0.23
CCSER2-202ENST00000359979 RHODO00212 210 aa16.48■□□□□ 0.23
CCSER2-202ENST00000359979 ZNF22P17026 224 aaPredicted RBP16.48■□□□□ 0.23
CCSER2-202ENST00000359979 GTSF1LQ9H1H1 148 aa16.48■□□□□ 0.23
CCSER2-202ENST00000359979 IGLV4-3A0A075B6K6 122 aa16.47■□□□□ 0.23
CCSER2-202ENST00000359979 VCX2Q9H322 139 aa16.47■□□□□ 0.23
CCSER2-202ENST00000359979 PYGO1Q9Y3Y4 419 aa16.47■□□□□ 0.23
CCSER2-202ENST00000359979 FOXI1Q12951 378 aa16.47■□□□□ 0.23
CCSER2-202ENST00000359979 PRO1854Q9UHT4 67 aa16.47■□□□□ 0.23
CCSER2-202ENST00000359979 A8MTW9 85 aa16.46■□□□□ 0.23
CCSER2-202ENST00000359979 CRYBA4P53673 196 aa16.46■□□□□ 0.23
CCSER2-202ENST00000359979 ZNF702PQ9H963 129 aa16.46■□□□□ 0.23
CCSER2-202ENST00000359979 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.45■□□□□ 0.22
CCSER2-202ENST00000359979 INSL3P51460 131 aa16.45■□□□□ 0.22
CCSER2-202ENST00000359979 TCTEX1D4Q5JR98 221 aa16.45■□□□□ 0.22
CCSER2-202ENST00000359979 DUX5Q96PT3 197 aa16.45■□□□□ 0.22
CCSER2-202ENST00000359979 RBMY1A1P0DJD3 496 aaKnown RBP16.44■□□□□ 0.22
CCSER2-202ENST00000359979 RBMY1CP0DJD4 496 aa16.44■□□□□ 0.22
CCSER2-202ENST00000359979 RBMY1FQ15415 496 aaKnown RBP16.44■□□□□ 0.22
CCSER2-202ENST00000359979 PIK3CD-AS1Q5SR53 167 aa16.44■□□□□ 0.22
CCSER2-202ENST00000359979 Q6YL49 198 aa16.44■□□□□ 0.22
CCSER2-202ENST00000359979 TGFAP01135 160 aa16.44■□□□□ 0.22
CCSER2-202ENST00000359979 NRGNQ92686 78 aa16.44■□□□□ 0.22
CCSER2-202ENST00000359979 Q5PR19 223 aa16.43■□□□□ 0.22
CCSER2-202ENST00000359979 SFTA2Q6UW10 78 aa16.43■□□□□ 0.22
CCSER2-202ENST00000359979 TRAV2A0A0B4J234 112 aa16.42■□□□□ 0.22
CCSER2-202ENST00000359979 A0A0J9YXV3 536 aa16.42■□□□□ 0.22
CCSER2-202ENST00000359979 TCL1BO95988 128 aa16.42■□□□□ 0.22
CCSER2-202ENST00000359979 FSHBP01225 129 aa16.42■□□□□ 0.22
CCSER2-202ENST00000359979 SBSPONQ8IVN8 264 aa16.42■□□□□ 0.22
CCSER2-202ENST00000359979 SMAGPQ0VAQ4 97 aa16.42■□□□□ 0.22
CCSER2-202ENST00000359979 DOPEY1Q5JWR5 2465 aa16.42■□□□□ 0.22
CCSER2-202ENST00000359979 A0A0B4J2C4 111 aa16.41■□□□□ 0.22
CCSER2-202ENST00000359979 A8MWV9 139 aa16.41■□□□□ 0.22
CCSER2-202ENST00000359979 PTH2Q96A98 100 aa16.41■□□□□ 0.22
CCSER2-202ENST00000359979 KNCNA6PVL3 124 aa16.41■□□□□ 0.22
CCSER2-202ENST00000359979 LRRK2Q5S007 2527 aa16.4■□□□□ 0.22
CCSER2-202ENST00000359979 A4D1N5 150 aa16.4■□□□□ 0.22
CCSER2-202ENST00000359979 MRPS36P82909 103 aaKnown RBP16.4■□□□□ 0.22
CCSER2-202ENST00000359979 H3BMM0 161 aa16.39■□□□□ 0.21
CCSER2-202ENST00000359979 M0R2P5 195 aa16.39■□□□□ 0.21
CCSER2-202ENST00000359979 CD28P10747 220 aa16.39■□□□□ 0.21
CCSER2-202ENST00000359979 ZNF418Q8TF45 676 aaPredicted RBP16.39■□□□□ 0.21
CCSER2-202ENST00000359979 UTP20O75691 2785 aaKnown RBP16.39■□□□□ 0.21
CCSER2-202ENST00000359979 DEFB131AP59861 70 aa16.39■□□□□ 0.21
CCSER2-202ENST00000359979 TEN1Q86WV5 123 aa16.39■□□□□ 0.21
CCSER2-202ENST00000359979 TMEM263Q8WUH6 116 aaKnown RBP16.39■□□□□ 0.21
CCSER2-202ENST00000359979 TNFRSF18Q9Y5U5 241 aa16.39■□□□□ 0.21
CCSER2-202ENST00000359979 TENM4Q6N022 2769 aa16.39■□□□□ 0.21
CCSER2-202ENST00000359979 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.38■□□□□ 0.21
CCSER2-202ENST00000359979 PPDPFLQ8WWR9 84 aa16.38■□□□□ 0.21
CCSER2-202ENST00000359979 FAM104AQ969W3 186 aa16.38■□□□□ 0.21
CCSER2-202ENST00000359979 HELZ2Q9BYK8 2649 aaKnown RBP16.38■□□□□ 0.21
CCSER2-202ENST00000359979 SCGB1C2P0DMR2 95 aa16.38■□□□□ 0.21
CCSER2-202ENST00000359979 IGHV3-33P01772 117 aa16.37■□□□□ 0.21
CCSER2-202ENST00000359979 ZNF415Q09FC8 603 aa16.36■□□□□ 0.21
CCSER2-202ENST00000359979 MUSTN1Q8IVN3 82 aa16.36■□□□□ 0.21
CCSER2-202ENST00000359979 DUX3Q96PT4 197 aa16.36■□□□□ 0.21
CCSER2-202ENST00000359979 IGHV3-64A0A075B6Q5 118 aa16.36■□□□□ 0.21
CCSER2-202ENST00000359979 A0A0J9YXY3 114 aa16.36■□□□□ 0.21
CCSER2-202ENST00000359979 IGHV3-30-3P0DP02 117 aa16.36■□□□□ 0.21
CCSER2-202ENST00000359979 SLURP1P55000 103 aa16.36■□□□□ 0.21
CCSER2-202ENST00000359979 TIMM21Q9BVV7 248 aa16.36■□□□□ 0.21
CCSER2-202ENST00000359979 IGHV3-73A0A0B4J1V6 119 aa16.35■□□□□ 0.21
CCSER2-202ENST00000359979 RBMY1BA6NDE4 496 aaKnown RBP16.35■□□□□ 0.21
CCSER2-202ENST00000359979 RBMY1EA6NEQ0 496 aaKnown RBP16.35■□□□□ 0.21
CCSER2-202ENST00000359979 RBMY1DP0C7P1 496 aaKnown RBP16.35■□□□□ 0.21
CCSER2-202ENST00000359979 HTN1P15515 57 aa16.35■□□□□ 0.21
CCSER2-202ENST00000359979 LINC00467Q9BRT7 94 aa16.35■□□□□ 0.21
CCSER2-202ENST00000359979 SPANXA1Q9NS26 97 aa16.35■□□□□ 0.21
CCSER2-202ENST00000359979 ERG28Q9UKR5 140 aa16.35■□□□□ 0.21
CCSER2-202ENST00000359979 M0QXV9 152 aa16.34■□□□□ 0.21
CCSER2-202ENST00000359979 EIF4EBP3O60516 100 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms