RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 PRM2P04554 102 aa8.36□□□□□ -1.07
SSU72-202ENST00000359060 AMTNQ6UX39 209 aa8.36□□□□□ -1.07
SSU72-202ENST00000359060 TMEM141Q96I45 108 aa8.36□□□□□ -1.07
SSU72-202ENST00000359060 BBC3Q96PG8 261 aaPredicted RBP8.36□□□□□ -1.07
SSU72-202ENST00000359060 A0A0U1RRA0 63 aa8.36□□□□□ -1.07
SSU72-202ENST00000359060 SOCS3O14543 225 aa8.36□□□□□ -1.07
SSU72-202ENST00000359060 DLX4Q92988 240 aaPredicted RBP8.36□□□□□ -1.07
SSU72-202ENST00000359060 IGHV4-4A0A075B6R2 117 aa8.35□□□□□ -1.07
SSU72-202ENST00000359060 TMEM89A2RUT3 159 aa8.35□□□□□ -1.07
SSU72-202ENST00000359060 K7EP34 96 aa8.35□□□□□ -1.07
SSU72-202ENST00000359060 MAPKAPK5-AS1Q8N8E1 139 aa8.35□□□□□ -1.07
SSU72-202ENST00000359060 CFAP46Q8IYW2 2715 aa8.35□□□□□ -1.07
SSU72-202ENST00000359060 C11orf86A6NJI1 115 aa8.35□□□□□ -1.07
SSU72-202ENST00000359060 UBE2L6O14933 153 aa8.35□□□□□ -1.07
SSU72-202ENST00000359060 WFDC11Q8NEX6 87 aa8.35□□□□□ -1.07
SSU72-202ENST00000359060 KLLNB2CW77 178 aa8.35□□□□□ -1.07
SSU72-202ENST00000359060 FGF6P10767 208 aa8.35□□□□□ -1.07
SSU72-202ENST00000359060 NPC2P61916 151 aa8.35□□□□□ -1.07
SSU72-202ENST00000359060 PSMG3-AS1Q96PY0 264 aa8.35□□□□□ -1.07
SSU72-202ENST00000359060 ZNF702PQ9H963 129 aa8.35□□□□□ -1.07
SSU72-202ENST00000359060 P0DMU3 169 aa8.34□□□□□ -1.07
SSU72-202ENST00000359060 FAM231AP0DMU4 169 aa8.34□□□□□ -1.07
SSU72-202ENST00000359060 FAM231CP0DMU5 169 aa8.34□□□□□ -1.07
SSU72-202ENST00000359060 C12orf74Q32Q52 190 aa8.34□□□□□ -1.07
SSU72-202ENST00000359060 TRAV12-1A0A0B4J245 112 aa8.34□□□□□ -1.07
SSU72-202ENST00000359060 A8MWV9 139 aa8.34□□□□□ -1.07
SSU72-202ENST00000359060 CFHR3Q02985 330 aa8.34□□□□□ -1.07
SSU72-202ENST00000359060 ADARB2-AS1A8MUL3 147 aa8.34□□□□□ -1.07
SSU72-202ENST00000359060 HHLA3Q9XRX5 114 aa8.33□□□□□ -1.08
SSU72-202ENST00000359060 M0R2P5 195 aa8.33□□□□□ -1.08
SSU72-202ENST00000359060 C19orf54Q5BKX5 351 aa8.33□□□□□ -1.08
SSU72-202ENST00000359060 ADAMTSL5Q6ZMM2 481 aa8.33□□□□□ -1.08
SSU72-202ENST00000359060 A0A0J9YXV3 536 aa8.33□□□□□ -1.08
SSU72-202ENST00000359060 CCL24O00175 119 aa8.33□□□□□ -1.08
SSU72-202ENST00000359060 HIGD1BQ9P298 99 aa8.33□□□□□ -1.08
SSU72-202ENST00000359060 H3BMG7 143 aa8.32□□□□□ -1.08
SSU72-202ENST00000359060 J3QQQ9 107 aa8.32□□□□□ -1.08
SSU72-202ENST00000359060 GAGE13Q4V321 117 aa8.32□□□□□ -1.08
SSU72-202ENST00000359060 USP24Q9UPU5 2620 aa8.32□□□□□ -1.08
SSU72-202ENST00000359060 DCHS2Q6V1P9 2916 aa8.32□□□□□ -1.08
SSU72-202ENST00000359060 ZNRF2Q8NHG8 242 aa8.32□□□□□ -1.08
SSU72-202ENST00000359060 IGLV2-18A0A075B6J9 118 aa8.32□□□□□ -1.08
SSU72-202ENST00000359060 NEXN-AS1Q8NBZ9 246 aa8.32□□□□□ -1.08
SSU72-202ENST00000359060 FLNAP21333 2647 aaKnown RBP8.32□□□□□ -1.08
SSU72-202ENST00000359060 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.32□□□□□ -1.08
SSU72-202ENST00000359060 IGKV2-29A2NJV5 120 aaPredicted RBP8.32□□□□□ -1.08
SSU72-202ENST00000359060 MEIG1Q5JSS6 88 aa8.32□□□□□ -1.08
SSU72-202ENST00000359060 TIMM21Q9BVV7 248 aa8.32□□□□□ -1.08
SSU72-202ENST00000359060 SVEP1Q4LDE5 3571 aa8.32□□□□□ -1.08
SSU72-202ENST00000359060 ZFHX3Q15911 3703 aa8.31□□□□□ -1.08
SSU72-202ENST00000359060 RPL36AP83881 106 aaKnown RBP8.31□□□□□ -1.08
SSU72-202ENST00000359060 RPL36ALQ969Q0 106 aaKnown RBP8.31□□□□□ -1.08
SSU72-202ENST00000359060 TRAV13-1A0A0B4J241 112 aa8.31□□□□□ -1.08
SSU72-202ENST00000359060 TRGV4A0A0C4DH28 118 aa8.31□□□□□ -1.08
SSU72-202ENST00000359060 E9PLD3 99 aa8.31□□□□□ -1.08
SSU72-202ENST00000359060 H3BMM0 161 aa8.31□□□□□ -1.08
SSU72-202ENST00000359060 LGALS9O00182 355 aa8.31□□□□□ -1.08
SSU72-202ENST00000359060 RHODO00212 210 aa8.31□□□□□ -1.08
SSU72-202ENST00000359060 AZU1P20160 251 aa8.31□□□□□ -1.08
SSU72-202ENST00000359060 PROK1P58294 105 aa8.31□□□□□ -1.08
SSU72-202ENST00000359060 TAL2Q16559 108 aa8.31□□□□□ -1.08
SSU72-202ENST00000359060 ETDBQ3ZM63 59 aa8.31□□□□□ -1.08
SSU72-202ENST00000359060 CEMP1Q6PRD7 247 aaPredicted RBP8.31□□□□□ -1.08
SSU72-202ENST00000359060 PLEKHB2Q96CS7 222 aa8.31□□□□□ -1.08
SSU72-202ENST00000359060 CIDEAO60543 219 aa8.3□□□□□ -1.08
SSU72-202ENST00000359060 RHOHQ15669 191 aa8.3□□□□□ -1.08
SSU72-202ENST00000359060 GAGE12JA6NER3 117 aa8.3□□□□□ -1.08
SSU72-202ENST00000359060 GAGE4Q13068 117 aa8.3□□□□□ -1.08
SSU72-202ENST00000359060 GAGE5Q13069 117 aa8.3□□□□□ -1.08
SSU72-202ENST00000359060 TOMM7Q9P0U1 55 aa8.3□□□□□ -1.08
SSU72-202ENST00000359060 IGLL5B9A064 214 aa8.3□□□□□ -1.08
SSU72-202ENST00000359060 SPAG8Q99932 426 aaPredicted RBP8.3□□□□□ -1.08
SSU72-202ENST00000359060 MAP6D1Q9H9H5 199 aa8.3□□□□□ -1.08
SSU72-202ENST00000359060 DNAJC9-AS1A6NH13 148 aa8.29□□□□□ -1.08
SSU72-202ENST00000359060 ZNF625Q96I27 306 aaPredicted RBP8.29□□□□□ -1.08
SSU72-202ENST00000359060 CIRBPQ14011 172 aaKnown RBP8.29□□□□□ -1.08
SSU72-202ENST00000359060 M0QY20 66 aa8.29□□□□□ -1.08
SSU72-202ENST00000359060 BRI3O95415 125 aa8.29□□□□□ -1.08
SSU72-202ENST00000359060 C4orf3Q8WVX3 66 aa8.29□□□□□ -1.08
SSU72-202ENST00000359060 TIMM17AQ99595 171 aa8.29□□□□□ -1.08
SSU72-202ENST00000359060 CITED2Q99967 270 aaPredicted RBP8.29□□□□□ -1.08
SSU72-202ENST00000359060 TMEM238C9JI98 176 aa8.29□□□□□ -1.08
SSU72-202ENST00000359060 Q6ZSV7 163 aa8.29□□□□□ -1.08
SSU72-202ENST00000359060 ODF3Q96PU9 254 aa8.29□□□□□ -1.08
SSU72-202ENST00000359060 HECTD1Q9ULT8 2610 aa8.28□□□□□ -1.08
SSU72-202ENST00000359060 GAGE7O76087 117 aa8.28□□□□□ -1.08
SSU72-202ENST00000359060 GAGE12FP0CL80 117 aa8.28□□□□□ -1.08
SSU72-202ENST00000359060 GAGE12GP0CL81 117 aa8.28□□□□□ -1.08
SSU72-202ENST00000359060 GAGE12IP0CL82 117 aa8.28□□□□□ -1.08
SSU72-202ENST00000359060 KLK9Q2XQG4 91 aa8.28□□□□□ -1.08
SSU72-202ENST00000359060 C20orf203Q8NBC4 194 aa8.28□□□□□ -1.08
SSU72-202ENST00000359060 CRYGDP07320 174 aa8.28□□□□□ -1.08
SSU72-202ENST00000359060 POLR2KP53803 58 aaKnown RBP8.28□□□□□ -1.08
SSU72-202ENST00000359060 TMEM101Q96IK0 257 aa8.28□□□□□ -1.08
SSU72-202ENST00000359060 ITPR3Q14573 2671 aa8.28□□□□□ -1.08
SSU72-202ENST00000359060 TMEM262E9PQX1 116 aa8.28□□□□□ -1.08
SSU72-202ENST00000359060 COX6CP09669 75 aa8.28□□□□□ -1.08
SSU72-202ENST00000359060 ERG28Q9UKR5 140 aa8.28□□□□□ -1.08
SSU72-202ENST00000359060 DEFB130BP0DP73 79 aa8.27□□□□□ -1.09
SSU72-202ENST00000359060 DEFB130AP0DP74 79 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms