RNA–Protein interactions for RNA: ENST00000358813.4

CCL20-201, Transcript of C-C motif chemokine ligand 20, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCL20, Length 800 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-201ENST00000358813 SMIM31A0A1B0GVY4 71 aa3.34□□□□□ -1.87
CCL20-201ENST00000358813 CRYM-AS1A6NIL9 109 aa3.34□□□□□ -1.87
CCL20-201ENST00000358813 M0R2Z0 102 aa3.34□□□□□ -1.87
CCL20-201ENST00000358813 PMP2P02689 132 aa3.34□□□□□ -1.87
CCL20-201ENST00000358813 IGLV7-43P04211 117 aa3.34□□□□□ -1.87
CCL20-201ENST00000358813 YPEL3P61236 119 aaPredicted RBP3.34□□□□□ -1.87
CCL20-201ENST00000358813 SUPT4H1P63272 117 aaKnown RBP3.34□□□□□ -1.87
CCL20-201ENST00000358813 HIST1H1AQ02539 215 aaPredicted RBP3.34□□□□□ -1.87
CCL20-201ENST00000358813 EIF4EBP1Q13541 118 aaPredicted RBP3.34□□□□□ -1.87
CCL20-201ENST00000358813 UPK3BQ9BT76 320 aa3.34□□□□□ -1.87
CCL20-201ENST00000358813 TMEM70Q9BUB7 260 aa3.34□□□□□ -1.87
CCL20-201ENST00000358813 NOP10Q9NPE3 64 aaKnown RBP3.34□□□□□ -1.87
CCL20-201ENST00000358813 COPZ2Q9P299 210 aa3.34□□□□□ -1.87
CCL20-201ENST00000358813 SSR3Q9UNL2 185 aa3.34□□□□□ -1.87
CCL20-201ENST00000358813 LY96Q9Y6Y9 160 aa3.34□□□□□ -1.87
CCL20-201ENST00000358813 DNAH11Q96DT5 4516 aa3.34□□□□□ -1.87
CCL20-201ENST00000358813 PKHD1P08F94 4074 aa3.34□□□□□ -1.88
CCL20-201ENST00000358813 TRAV5A0A0B4J249 113 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 LINC00862A6NCI5 91 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 A8MU10 97 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 SNRPGP15A8MWD9 76 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 ETV6P41212 452 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 LINC00313P59037 77 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 HAMPP81172 84 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 PMAIP1Q13794 54 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 ACOT6Q3I5F7 207 aaPredicted RBP3.33□□□□□ -1.88
CCL20-201ENST00000358813 C1orf194Q5T5A4 169 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 GDF5OSQ5U4N7 250 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 SLC25A34Q6PIV7 304 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 TMEM91Q6ZNR0 172 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 BAP18Q8IXM2 172 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 C10orf126Q8N4M7 172 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 TMEM263Q8WUH6 116 aaKnown RBP3.33□□□□□ -1.88
CCL20-201ENST00000358813 AP3S1Q92572 193 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 RMI2Q96E14 147 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 S100A16Q96FQ6 103 aaKnown RBP3.33□□□□□ -1.88
CCL20-201ENST00000358813 BTF3L4Q96K17 158 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 DPH3P1Q9H4G8 78 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 KLK12Q9UKR0 248 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 ICOSQ9Y6W8 199 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 NACAE9PAV3 2078 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 TRAV12-2A0A075B6T6 113 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 A0A087WTM6 91 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 A0A0J9YX75 114 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 CFDP00746 253 aaPredicted RBP3.32□□□□□ -1.88
CCL20-201ENST00000358813 IGLC1P0CG04 106 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 DNAH10OSP0CZ25 163 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 RNASE2P10153 161 aaKnown RBP3.32□□□□□ -1.88
CCL20-201ENST00000358813 FUSP35637 526 aaKnown RBP eCLIP3.32□□□□□ -1.88
CCL20-201ENST00000358813 RPL5P46777 297 aaKnown RBP3.32□□□□□ -1.88
CCL20-201ENST00000358813 C3orf22Q8N5N4 141 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 ZNF709Q8N972 641 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 GPR146Q96CH1 333 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 TMEM147Q9BVK8 224 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 PRELID1Q9Y255 219 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 TMEM56-RWDD3S4R434 201 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 VPS13DQ5THJ4 4388 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 DYNC1H1Q14204 4646 aaKnown RBP3.31□□□□□ -1.88
CCL20-201ENST00000358813 HERC1Q15751 4861 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 C3orf85A0A1B0GTC6 90 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 TRDV1A0A1B0GX56 115 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 A8MWP4 228 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 H3BNG1 76 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 H7BYZ3 331 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 K7EP13 123 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 M0R381 172 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 IGKV1-17P01599 117 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 SRIP30626 198 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 PIGPP57054 158 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 DEFB1P60022 68 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 ESRGQ1W209 222 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 SH2D6Q7Z4S9 175 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 TMED4Q7Z7H5 227 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 FXYD6Q9H0Q3 95 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 NDUFB11Q9NX14 153 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 LSM2Q9Y333 95 aaKnown RBP3.31□□□□□ -1.88
CCL20-201ENST00000358813 PHLDA3Q9Y5J5 127 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 PXMP4Q9Y6I8 212 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 A0A096LPF7 62 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 TRGV1A0A0A0MS02 117 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 PIGBOS1A0A0B4J2F0 54 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.3□□□□□ -1.88
CCL20-201ENST00000358813 RPL7P18124 248 aaKnown RBP3.3□□□□□ -1.88
CCL20-201ENST00000358813 G0S2P27469 103 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 KRTAP10-1P60331 282 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 AKR1C1Q04828 323 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 SCGB2B2Q4G0G5 96 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 RNASE10Q5GAN6 216 aaKnown RBP3.3□□□□□ -1.88
CCL20-201ENST00000358813 ZNF680Q8NEM1 530 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 PRRT1Q99946 306 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 TXNDC17Q9BRA2 123 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 U3KQ87 197 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 HSPG2P98160 4391 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 IGLV4-60A0A075B6I1 120 aa3.29□□□□□ -1.88
CCL20-201ENST00000358813 IGKV2D-24A0A075B6R9 120 aa3.29□□□□□ -1.88
CCL20-201ENST00000358813 TRGV4A0A0C4DH28 118 aa3.29□□□□□ -1.88
CCL20-201ENST00000358813 A6NED7 52 aa3.29□□□□□ -1.88
CCL20-201ENST00000358813 TMEM238C9JI98 176 aa3.29□□□□□ -1.88
CCL20-201ENST00000358813 APOMO95445 188 aa3.29□□□□□ -1.88
CCL20-201ENST00000358813 CRYGDP07320 174 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms