RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 C16orf92Q96LL3 132 aa16.76■□□□□ 0.27
POLR2J2-202ENST00000358438 HIVEP2P31629 2446 aa16.75■□□□□ 0.27
POLR2J2-202ENST00000358438 EDN2P20800 178 aa16.75■□□□□ 0.27
POLR2J2-202ENST00000358438 ORMDL2Q53FV1 153 aa16.75■□□□□ 0.27
POLR2J2-202ENST00000358438 A8MWV9 139 aa16.74■□□□□ 0.27
POLR2J2-202ENST00000358438 HOXD3P31249 432 aaPredicted RBP16.74■□□□□ 0.27
POLR2J2-202ENST00000358438 RPL11P62913 178 aaKnown RBP16.74■□□□□ 0.27
POLR2J2-202ENST00000358438 NEXN-AS1Q8NBZ9 246 aa16.74■□□□□ 0.27
POLR2J2-202ENST00000358438 TOMM6Q96B49 74 aa16.73■□□□□ 0.27
POLR2J2-202ENST00000358438 LGALS9O00182 355 aa16.73■□□□□ 0.27
POLR2J2-202ENST00000358438 SOCS3O14543 225 aa16.73■□□□□ 0.27
POLR2J2-202ENST00000358438 SYNJ2BPP57105 145 aa16.73■□□□□ 0.27
POLR2J2-202ENST00000358438 C18orf65Q6ZTR6 163 aa16.73■□□□□ 0.27
POLR2J2-202ENST00000358438 HILS1P60008 231 aa16.72■□□□□ 0.27
POLR2J2-202ENST00000358438 SMIM2Q9BVW6 85 aa16.72■□□□□ 0.27
POLR2J2-202ENST00000358438 LOC107984156A0A0G2JMH3 177 aa16.71■□□□□ 0.27
POLR2J2-202ENST00000358438 ARL17AQ8IVW1 177 aa16.71■□□□□ 0.27
POLR2J2-202ENST00000358438 C4orf3Q8WVX3 66 aa16.71■□□□□ 0.27
POLR2J2-202ENST00000358438 CITED1Q99966 193 aa16.71■□□□□ 0.27
POLR2J2-202ENST00000358438 CD7P09564 240 aa16.71■□□□□ 0.27
POLR2J2-202ENST00000358438 ASIPP42127 132 aa16.71■□□□□ 0.27
POLR2J2-202ENST00000358438 ERCC8Q13216 396 aa16.71■□□□□ 0.27
POLR2J2-202ENST00000358438 PRSS29PA6NIE9 313 aa16.7■□□□□ 0.26
POLR2J2-202ENST00000358438 DEFB136Q30KP8 78 aa16.7■□□□□ 0.26
POLR2J2-202ENST00000358438 KHDC1LQ5JSQ8 128 aa16.7■□□□□ 0.26
POLR2J2-202ENST00000358438 C20orf173Q96LM9 149 aa16.7■□□□□ 0.26
POLR2J2-202ENST00000358438 SCGB3A1Q96QR1 104 aa16.7■□□□□ 0.26
POLR2J2-202ENST00000358438 PRADC1Q9BSG0 188 aa16.7■□□□□ 0.26
POLR2J2-202ENST00000358438 SPANXA1Q9NS26 97 aa16.7■□□□□ 0.26
POLR2J2-202ENST00000358438 IGKV3-7A0A075B6H7 116 aa16.69■□□□□ 0.26
POLR2J2-202ENST00000358438 ZNF815PA8K554 130 aa16.69■□□□□ 0.26
POLR2J2-202ENST00000358438 SRSF9Q13242 221 aaKnown RBP eCLIP16.69■□□□□ 0.26
POLR2J2-202ENST00000358438 MAST4O15021 2626 aa16.68■□□□□ 0.26
POLR2J2-202ENST00000358438 IGKV3D-20A0A0C4DH25 116 aa16.68■□□□□ 0.26
POLR2J2-202ENST00000358438 CFAP161Q6P656 301 aa16.68■□□□□ 0.26
POLR2J2-202ENST00000358438 ZFP2Q6ZN57 461 aa16.68■□□□□ 0.26
POLR2J2-202ENST00000358438 NDUFA11Q86Y39 141 aa16.68■□□□□ 0.26
POLR2J2-202ENST00000358438 AGPAT4-IT1Q9H0P7 198 aa16.68■□□□□ 0.26
POLR2J2-202ENST00000358438 C16orf95Q9H693 158 aa16.68■□□□□ 0.26
POLR2J2-202ENST00000358438 SCGB1D4Q6XE38 83 aa16.67■□□□□ 0.26
POLR2J2-202ENST00000358438 F8P00451 2351 aa16.67■□□□□ 0.26
POLR2J2-202ENST00000358438 SLURP1P55000 103 aa16.66■□□□□ 0.26
POLR2J2-202ENST00000358438 PAPPA-AS1Q5QFB9 102 aa16.66■□□□□ 0.26
POLR2J2-202ENST00000358438 C9orf47Q6ZRZ4 202 aa16.66■□□□□ 0.26
POLR2J2-202ENST00000358438 KLHL30-AS1Q8NEE0 82 aa16.66■□□□□ 0.26
POLR2J2-202ENST00000358438 LINC01006Q8NI28 216 aa16.66■□□□□ 0.26
POLR2J2-202ENST00000358438 RHODO00212 210 aa16.66■□□□□ 0.26
POLR2J2-202ENST00000358438 TCL1BO95988 128 aa16.66■□□□□ 0.26
POLR2J2-202ENST00000358438 SS18L2Q9UHA2 77 aa16.66■□□□□ 0.26
POLR2J2-202ENST00000358438 Q6Q795 121 aa16.65■□□□□ 0.26
POLR2J2-202ENST00000358438 PTH2Q96A98 100 aa16.65■□□□□ 0.26
POLR2J2-202ENST00000358438 DCANP1Q8TF63 244 aa16.65■□□□□ 0.26
POLR2J2-202ENST00000358438 HIST2H2BDQ6DRA6 164 aa16.64■□□□□ 0.25
POLR2J2-202ENST00000358438 HERVK_113P61574 105 aa16.63■□□□□ 0.25
POLR2J2-202ENST00000358438 ANKRD29Q8N6D5 301 aa16.63■□□□□ 0.25
POLR2J2-202ENST00000358438 BAALCQ8WXS3 180 aa16.63■□□□□ 0.25
POLR2J2-202ENST00000358438 DUX3Q96PT4 197 aa16.63■□□□□ 0.25
POLR2J2-202ENST00000358438 C10orf126Q8N4M7 172 aa16.63■□□□□ 0.25
POLR2J2-202ENST00000358438 OVOL1O14753 267 aa16.62■□□□□ 0.25
POLR2J2-202ENST00000358438 PLEKHB2Q96CS7 222 aa16.62■□□□□ 0.25
POLR2J2-202ENST00000358438 LINC01600Q96MT4 127 aa16.62■□□□□ 0.25
POLR2J2-202ENST00000358438 TRAV26-2A0A0B4J265 109 aa16.61■□□□□ 0.25
POLR2J2-202ENST00000358438 INAFM1C9JVW0 142 aa16.61■□□□□ 0.25
POLR2J2-202ENST00000358438 SUMO2P61956 95 aaKnown RBP16.61■□□□□ 0.25
POLR2J2-202ENST00000358438 SPANXN1Q5VSR9 72 aa16.61■□□□□ 0.25
POLR2J2-202ENST00000358438 C11orf44Q8N8P7 122 aa16.61■□□□□ 0.25
POLR2J2-202ENST00000358438 C11orf21Q9P2W6 132 aa16.61■□□□□ 0.25
POLR2J2-202ENST00000358438 NSD1Q96L73 2696 aaPredicted RBP16.61■□□□□ 0.25
POLR2J2-202ENST00000358438 M0R381 172 aa16.61■□□□□ 0.25
POLR2J2-202ENST00000358438 SCGB1C2P0DMR2 95 aa16.61■□□□□ 0.25
POLR2J2-202ENST00000358438 CD28P10747 220 aa16.61■□□□□ 0.25
POLR2J2-202ENST00000358438 OR10J6PQ8NGY7 276 aa16.61■□□□□ 0.25
POLR2J2-202ENST00000358438 RASL10AQ92737 203 aa16.61■□□□□ 0.25
POLR2J2-202ENST00000358438 A0A0J9YY99 117 aa16.6■□□□□ 0.25
POLR2J2-202ENST00000358438 NHLRC4P0CG21 123 aaPredicted RBP16.6■□□□□ 0.25
POLR2J2-202ENST00000358438 ID1P41134 155 aa16.6■□□□□ 0.25
POLR2J2-202ENST00000358438 SETD2Q9BYW2 2564 aaPredicted RBP16.6■□□□□ 0.25
POLR2J2-202ENST00000358438 DEFB1P60022 68 aa16.6■□□□□ 0.25
POLR2J2-202ENST00000358438 GAGE2BQ13066 116 aa16.6■□□□□ 0.25
POLR2J2-202ENST00000358438 GAGE2EQ4V326 116 aa16.6■□□□□ 0.25
POLR2J2-202ENST00000358438 FAM110AQ9BQ89 295 aa16.6■□□□□ 0.25
POLR2J2-202ENST00000358438 GAGE2DQ9UEU5 116 aa16.6■□□□□ 0.25
POLR2J2-202ENST00000358438 LINC00477Q96M19 166 aa16.59■□□□□ 0.25
POLR2J2-202ENST00000358438 PEMTQ9UBM1 199 aa16.59■□□□□ 0.25
POLR2J2-202ENST00000358438 LENEPQ9Y5L5 61 aa16.59■□□□□ 0.25
POLR2J2-202ENST00000358438 NDUFA7O95182 113 aa16.58■□□□□ 0.25
POLR2J2-202ENST00000358438 PPP1R17O96001 155 aa16.58■□□□□ 0.25
POLR2J2-202ENST00000358438 C2orf66Q6UXQ4 117 aa16.58■□□□□ 0.25
POLR2J2-202ENST00000358438 B5MCH6 92 aa16.58■□□□□ 0.24
POLR2J2-202ENST00000358438 PRO1854Q9UHT4 67 aa16.58■□□□□ 0.24
POLR2J2-202ENST00000358438 GAGE12JA6NER3 117 aa16.57■□□□□ 0.24
POLR2J2-202ENST00000358438 F6UB75 175 aa16.57■□□□□ 0.24
POLR2J2-202ENST00000358438 SNCGO76070 127 aa16.57■□□□□ 0.24
POLR2J2-202ENST00000358438 GAGE7O76087 117 aa16.57■□□□□ 0.24
POLR2J2-202ENST00000358438 IGHV3-30P01768 117 aa16.57■□□□□ 0.24
POLR2J2-202ENST00000358438 CFC1BP0CG36 223 aa16.57■□□□□ 0.24
POLR2J2-202ENST00000358438 CFC1P0CG37 223 aa16.57■□□□□ 0.24
POLR2J2-202ENST00000358438 GAGE12FP0CL80 117 aa16.57■□□□□ 0.24
POLR2J2-202ENST00000358438 GAGE12GP0CL81 117 aa16.57■□□□□ 0.24
POLR2J2-202ENST00000358438 GAGE12IP0CL82 117 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms