RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 GATA1P15976 413 aaPredicted RBP17.08■□□□□ 0.33
CHKA-202ENST00000356135 IFI27P40305 119 aaPredicted RBP17.08■□□□□ 0.33
CHKA-202ENST00000356135 LINC00612Q8N6U2 182 aa17.08■□□□□ 0.33
CHKA-202ENST00000356135 C12orf57Q99622 126 aa17.08■□□□□ 0.33
CHKA-202ENST00000356135 C11orf68Q9H3H3 251 aaKnown RBP17.08■□□□□ 0.33
CHKA-202ENST00000356135 AP5S1Q9NUS5 200 aa17.08■□□□□ 0.33
CHKA-202ENST00000356135 COL7A1Q02388 2944 aa17.08■□□□□ 0.32
CHKA-202ENST00000356135 RS1O15537 224 aa17.07■□□□□ 0.32
CHKA-202ENST00000356135 FA2HQ7L5A8 372 aa17.07■□□□□ 0.32
CHKA-202ENST00000356135 ZNF479Q96JC4 524 aa17.07■□□□□ 0.32
CHKA-202ENST00000356135 PRSS47A8MTI9 375 aa17.07■□□□□ 0.32
CHKA-202ENST00000356135 A8MWV9 139 aa17.07■□□□□ 0.32
CHKA-202ENST00000356135 MGPP08493 103 aa17.07■□□□□ 0.32
CHKA-202ENST00000356135 IGHV1-24A0A0C4DH33 117 aa17.06■□□□□ 0.32
CHKA-202ENST00000356135 OR4C5Q8NGB2 326 aa17.06■□□□□ 0.32
CHKA-202ENST00000356135 LOC389332A0A1B0GUA5 103 aa17.05■□□□□ 0.32
CHKA-202ENST00000356135 JOSD1Q15040 202 aaPredicted RBP17.05■□□□□ 0.32
CHKA-202ENST00000356135 LINC01546A6NGU7 62 aa17.05■□□□□ 0.32
CHKA-202ENST00000356135 UFSP1Q6NVU6 142 aa17.05■□□□□ 0.32
CHKA-202ENST00000356135 NHLRC4P0CG21 123 aaPredicted RBP17.04■□□□□ 0.32
CHKA-202ENST00000356135 DAD1P61803 113 aa17.04■□□□□ 0.32
CHKA-202ENST00000356135 NDUFAF3Q9BU61 184 aa17.04■□□□□ 0.32
CHKA-202ENST00000356135 NXT2Q9NPJ8 142 aaKnown RBP17.04■□□□□ 0.32
CHKA-202ENST00000356135 TRAV4A0A0B4J268 109 aa17.03■□□□□ 0.32
CHKA-202ENST00000356135 C12orf74Q32Q52 190 aa17.03■□□□□ 0.32
CHKA-202ENST00000356135 PPP1R17O96001 155 aa17.02■□□□□ 0.32
CHKA-202ENST00000356135 Q6ZSN1 163 aa17.02■□□□□ 0.32
CHKA-202ENST00000356135 PMCHL1Q16048 86 aa17.02■□□□□ 0.31
CHKA-202ENST00000356135 NACAE9PAV3 2078 aa17.01■□□□□ 0.31
CHKA-202ENST00000356135 IGLV2-18A0A075B6J9 118 aa17.01■□□□□ 0.31
CHKA-202ENST00000356135 F5H697 171 aa17.01■□□□□ 0.31
CHKA-202ENST00000356135 ZNF56Q15929 161 aa17.01■□□□□ 0.31
CHKA-202ENST00000356135 SUMO4Q6EEV6 95 aa17.01■□□□□ 0.31
CHKA-202ENST00000356135 C20orf78Q9BR46 151 aa17.01■□□□□ 0.31
CHKA-202ENST00000356135 NANOS2P60321 138 aaKnown RBP17■□□□□ 0.31
CHKA-202ENST00000356135 Q8N8P6 123 aa17■□□□□ 0.31
CHKA-202ENST00000356135 C11orf45Q8TAV5 145 aa17■□□□□ 0.31
CHKA-202ENST00000356135 C18orf15Q96N68 181 aa17■□□□□ 0.31
CHKA-202ENST00000356135 SUMO2P61956 95 aaKnown RBP16.98■□□□□ 0.31
CHKA-202ENST00000356135 RPL39LQ96EH5 51 aaKnown RBP16.98■□□□□ 0.31
CHKA-202ENST00000356135 FHL2Q14192 279 aa16.97■□□□□ 0.31
CHKA-202ENST00000356135 ZFP2Q6ZN57 461 aa16.97■□□□□ 0.31
CHKA-202ENST00000356135 SMIM2Q9BVW6 85 aa16.97■□□□□ 0.31
CHKA-202ENST00000356135 A0A096LNJ9 63 aa16.97■□□□□ 0.31
CHKA-202ENST00000356135 TEX48A0A1B0GUV7 120 aa16.97■□□□□ 0.31
CHKA-202ENST00000356135 Q6ZTC4 211 aa16.97■□□□□ 0.31
CHKA-202ENST00000356135 EDA2RQ9HAV5 297 aa16.97■□□□□ 0.31
CHKA-202ENST00000356135 Q9UF83 564 aa16.97■□□□□ 0.31
CHKA-202ENST00000356135 RHODO00212 210 aa16.96■□□□□ 0.31
CHKA-202ENST00000356135 LEPROTL1O95214 131 aa16.96■□□□□ 0.31
CHKA-202ENST00000356135 HTN3P15516 51 aa16.96■□□□□ 0.31
CHKA-202ENST00000356135 TRGV4A0A0C4DH28 118 aa16.95■□□□□ 0.3
CHKA-202ENST00000356135 P0DMU3 169 aa16.95■□□□□ 0.3
CHKA-202ENST00000356135 FAM231AP0DMU4 169 aa16.95■□□□□ 0.3
CHKA-202ENST00000356135 FAM231CP0DMU5 169 aa16.95■□□□□ 0.3
CHKA-202ENST00000356135 RPL32P62910 135 aaKnown RBP16.95■□□□□ 0.3
CHKA-202ENST00000356135 CDPF1Q6NVV7 123 aa16.95■□□□□ 0.3
CHKA-202ENST00000356135 NIT2Q9NQR4 276 aa16.95■□□□□ 0.3
CHKA-202ENST00000356135 FBN3Q75N90 2809 aa16.95■□□□□ 0.3
CHKA-202ENST00000356135 M0QY20 66 aa16.94■□□□□ 0.3
CHKA-202ENST00000356135 C3orf79P0CE67 100 aa16.94■□□□□ 0.3
CHKA-202ENST00000356135 KRTDAPP60985 99 aa16.94■□□□□ 0.3
CHKA-202ENST00000356135 HBDP02042 147 aa16.94■□□□□ 0.3
CHKA-202ENST00000356135 ATP5G1P05496 136 aa16.94■□□□□ 0.3
CHKA-202ENST00000356135 TRBV6-5A0A0K0K1A5 114 aa16.93■□□□□ 0.3
CHKA-202ENST00000356135 HSPB8Q9UJY1 196 aa16.93■□□□□ 0.3
CHKA-202ENST00000356135 SCGB1D1O95968 90 aa16.92■□□□□ 0.3
CHKA-202ENST00000356135 SLC25A29Q8N8R3 303 aa16.92■□□□□ 0.3
CHKA-202ENST00000356135 F5H768 121 aa16.92■□□□□ 0.3
CHKA-202ENST00000356135 K7EMI3 77 aa16.92■□□□□ 0.3
CHKA-202ENST00000356135 ST20Q9HBF5 79 aa16.92■□□□□ 0.3
CHKA-202ENST00000356135 LINC00173Q6ZV60 143 aa16.91■□□□□ 0.3
CHKA-202ENST00000356135 HHLA3Q9XRX5 114 aa16.91■□□□□ 0.3
CHKA-202ENST00000356135 BTF3P20290 206 aaKnown RBP16.9■□□□□ 0.3
CHKA-202ENST00000356135 FCER1GP30273 86 aa16.9■□□□□ 0.3
CHKA-202ENST00000356135 LAGE3Q14657 143 aa16.9■□□□□ 0.3
CHKA-202ENST00000356135 Q8N976 141 aa16.9■□□□□ 0.3
CHKA-202ENST00000356135 H7C1H1 209 aa16.89■□□□□ 0.3
CHKA-202ENST00000356135 CIDEAO60543 219 aa16.89■□□□□ 0.3
CHKA-202ENST00000356135 TMEM70Q9BUB7 260 aa16.89■□□□□ 0.3
CHKA-202ENST00000356135 LOC100131303A0A0U1RQF7 123 aa16.89■□□□□ 0.29
CHKA-202ENST00000356135 POLR2KP53803 58 aaKnown RBP16.89■□□□□ 0.29
CHKA-202ENST00000356135 A0A0J9YY99 117 aa16.87■□□□□ 0.29
CHKA-202ENST00000356135 TCAPO15273 167 aa16.87■□□□□ 0.29
CHKA-202ENST00000356135 CRYBA4P53673 196 aa16.87■□□□□ 0.29
CHKA-202ENST00000356135 K7EQD1 137 aa16.87■□□□□ 0.29
CHKA-202ENST00000356135 ORMDL2Q53FV1 153 aa16.87■□□□□ 0.29
CHKA-202ENST00000356135 TRBV27A0A0K0K1C4 114 aa16.86■□□□□ 0.29
CHKA-202ENST00000356135 TRBV6-4A0A1B0GX49 114 aa16.86■□□□□ 0.29
CHKA-202ENST00000356135 SDHAF1A6NFY7 115 aa16.86■□□□□ 0.29
CHKA-202ENST00000356135 MAP1LC3CQ9BXW4 147 aa16.86■□□□□ 0.29
CHKA-202ENST00000356135 PRO0255Q9UI72 69 aa16.86■□□□□ 0.29
CHKA-202ENST00000356135 SYS1-DBNDD2H3BUS1 97 aa16.85■□□□□ 0.29
CHKA-202ENST00000356135 NEXN-AS1Q8NBZ9 246 aa16.85■□□□□ 0.29
CHKA-202ENST00000356135 VSIG2Q96IQ7 327 aa16.85■□□□□ 0.29
CHKA-202ENST00000356135 TRAV26-1A0A087WT03 109 aa16.84■□□□□ 0.29
CHKA-202ENST00000356135 DEFB131BA0A096LNP1 70 aa16.84■□□□□ 0.29
CHKA-202ENST00000356135 VCYO14598 125 aa16.84■□□□□ 0.29
CHKA-202ENST00000356135 TEX43Q6ZNM6 134 aa16.84■□□□□ 0.29
CHKA-202ENST00000356135 GAGE12JA6NER3 117 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms