RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 PRO1854Q9UHT4 67 aa4.45□□□□□ -1.7
RFC1-201ENST00000349703 PYGO1Q9Y3Y4 419 aa4.45□□□□□ -1.7
RFC1-201ENST00000349703 TRAV21A0A0B4J279 112 aa4.45□□□□□ -1.7
RFC1-201ENST00000349703 WT1-ASQ06250 92 aa4.45□□□□□ -1.7
RFC1-201ENST00000349703 C10orf55Q5SWW7 151 aa4.45□□□□□ -1.7
RFC1-201ENST00000349703 C20orf78Q9BR46 151 aa4.45□□□□□ -1.7
RFC1-201ENST00000349703 UNC13CQ8NB66 2214 aa4.45□□□□□ -1.7
RFC1-201ENST00000349703 MT-ATP8P03928 68 aa4.44□□□□□ -1.7
RFC1-201ENST00000349703 LGALS1P09382 135 aaKnown RBP4.44□□□□□ -1.7
RFC1-201ENST00000349703 LINC00311Q8N616 119 aa4.44□□□□□ -1.7
RFC1-201ENST00000349703 MIR7-3HGQ8N6C7 128 aa4.44□□□□□ -1.7
RFC1-201ENST00000349703 CCL17Q92583 94 aa4.44□□□□□ -1.7
RFC1-201ENST00000349703 PLEKHB2Q96CS7 222 aa4.44□□□□□ -1.7
RFC1-201ENST00000349703 IGHV6-1A0A0B4J1U7 121 aa4.44□□□□□ -1.7
RFC1-201ENST00000349703 IGHV3-53P01767 116 aa4.44□□□□□ -1.7
RFC1-201ENST00000349703 IGKV2D-26A0A0A0MRZ7 120 aa4.44□□□□□ -1.7
RFC1-201ENST00000349703 IGHV1-18A0A0C4DH31 117 aa4.44□□□□□ -1.7
RFC1-201ENST00000349703 SPAARA0A1B0GVQ0 90 aa4.44□□□□□ -1.7
RFC1-201ENST00000349703 LOXL1Q08397 574 aaPredicted RBP4.44□□□□□ -1.7
RFC1-201ENST00000349703 MINOS1-NBL1R4GNA1 71 aa4.44□□□□□ -1.7
RFC1-201ENST00000349703 IGLV2-18A0A075B6J9 118 aa4.44□□□□□ -1.7
RFC1-201ENST00000349703 IGKV2-40A0A087WW87 121 aaPredicted RBP4.44□□□□□ -1.7
RFC1-201ENST00000349703 WISP2O76076 250 aa4.44□□□□□ -1.7
RFC1-201ENST00000349703 IGKV2D-40P01614 121 aaPredicted RBP4.44□□□□□ -1.7
RFC1-201ENST00000349703 BLCAPP62952 87 aa4.44□□□□□ -1.7
RFC1-201ENST00000349703 TMEM141Q96I45 108 aa4.44□□□□□ -1.7
RFC1-201ENST00000349703 WWC2-AS2Q96NR7 200 aa4.44□□□□□ -1.7
RFC1-201ENST00000349703 XAGE1AQ9HD64 81 aa4.44□□□□□ -1.7
RFC1-201ENST00000349703 ZNF71Q9NQZ8 489 aaPredicted RBP4.44□□□□□ -1.7
RFC1-201ENST00000349703 RBM12B-AS1Q9P1G2 102 aa4.44□□□□□ -1.7
RFC1-201ENST00000349703 NCOA6Q14686 2063 aaPredicted RBP4.44□□□□□ -1.7
RFC1-201ENST00000349703 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.43□□□□□ -1.7
RFC1-201ENST00000349703 SOCS3O14543 225 aa4.43□□□□□ -1.7
RFC1-201ENST00000349703 ABCA7Q8IZY2 2146 aa4.43□□□□□ -1.7
RFC1-201ENST00000349703 LRP4O75096 1905 aa4.43□□□□□ -1.7
RFC1-201ENST00000349703 hDV103S1A0JD37 113 aa4.43□□□□□ -1.7
RFC1-201ENST00000349703 ACYP1P07311 99 aa4.43□□□□□ -1.7
RFC1-201ENST00000349703 MIAQ16674 131 aa4.43□□□□□ -1.7
RFC1-201ENST00000349703 Q8N3U1 123 aa4.43□□□□□ -1.7
RFC1-201ENST00000349703 C14orf132Q9NPU4 83 aa4.43□□□□□ -1.7
RFC1-201ENST00000349703 K7EMT4 169 aa4.43□□□□□ -1.7
RFC1-201ENST00000349703 ATOX1O00244 68 aa4.43□□□□□ -1.7
RFC1-201ENST00000349703 NXPH4O95158 308 aa4.43□□□□□ -1.7
RFC1-201ENST00000349703 CFAP126Q5VTH2 177 aa4.43□□□□□ -1.7
RFC1-201ENST00000349703 LINC00322Q6ZN03 302 aaPredicted RBP4.43□□□□□ -1.7
RFC1-201ENST00000349703 C15orf53Q8NAA6 179 aa4.43□□□□□ -1.7
RFC1-201ENST00000349703 DPH3P1Q9H4G8 78 aa4.43□□□□□ -1.7
RFC1-201ENST00000349703 TRAV10A0A0B4J240 114 aa4.43□□□□□ -1.7
RFC1-201ENST00000349703 BRD3OSQ6XYD6 125 aa4.43□□□□□ -1.7
RFC1-201ENST00000349703 LINC00336Q6ZUF6 198 aa4.43□□□□□ -1.7
RFC1-201ENST00000349703 CHCHD10Q8WYQ3 142 aaPredicted RBP4.43□□□□□ -1.7
RFC1-201ENST00000349703 CNTRLQ7Z7A1 2325 aa4.42□□□□□ -1.7
RFC1-201ENST00000349703 FAM236AA0A1B0GUQ0 79 aa4.42□□□□□ -1.7
RFC1-201ENST00000349703 FAM236BA0A1B0GV22 79 aa4.42□□□□□ -1.7
RFC1-201ENST00000349703 ERC2-IT1O76042 136 aa4.42□□□□□ -1.7
RFC1-201ENST00000349703 LOXP28300 417 aaPredicted RBP4.42□□□□□ -1.7
RFC1-201ENST00000349703 ZNF56Q15929 161 aa4.42□□□□□ -1.7
RFC1-201ENST00000349703 SMIM2Q9BVW6 85 aa4.42□□□□□ -1.7
RFC1-201ENST00000349703 CMC4P56277 68 aaPredicted RBP4.42□□□□□ -1.7
RFC1-201ENST00000349703 WFDC10AQ9H1F0 79 aa4.42□□□□□ -1.7
RFC1-201ENST00000349703 LOC107984640A0A0U1RRK4 108 aa4.42□□□□□ -1.7
RFC1-201ENST00000349703 E7EQL1 145 aa4.42□□□□□ -1.7
RFC1-201ENST00000349703 CCL3L1P16619 93 aa4.42□□□□□ -1.7
RFC1-201ENST00000349703 CCL8P80075 99 aa4.42□□□□□ -1.7
RFC1-201ENST00000349703 IGKV1D-37A0A075B6S9 117 aa4.41□□□□□ -1.7
RFC1-201ENST00000349703 C19orf84I3L1E1 186 aa4.41□□□□□ -1.7
RFC1-201ENST00000349703 OVOL1O14753 267 aa4.41□□□□□ -1.7
RFC1-201ENST00000349703 CLPSL1A2RUU4 121 aa4.41□□□□□ -1.7
RFC1-201ENST00000349703 RBAKDNA6NC62 111 aa4.41□□□□□ -1.7
RFC1-201ENST00000349703 EPOPA6NHQ4 379 aa4.41□□□□□ -1.7
RFC1-201ENST00000349703 LINC00483Q53H64 154 aa4.41□□□□□ -1.7
RFC1-201ENST00000349703 IGHV1-46P01743 117 aa4.41□□□□□ -1.7
RFC1-201ENST00000349703 EBI3Q14213 229 aa4.41□□□□□ -1.7
RFC1-201ENST00000349703 C10orf105Q8TEF2 133 aa4.41□□□□□ -1.7
RFC1-201ENST00000349703 MDFICQ9P1T7 246 aa4.41□□□□□ -1.7
RFC1-201ENST00000349703 MED12Q93074 2177 aa4.41□□□□□ -1.7
RFC1-201ENST00000349703 KNL1Q8NG31 2342 aa4.41□□□□□ -1.7
RFC1-201ENST00000349703 ARHGAP21Q5T5U3 1957 aa4.41□□□□□ -1.7
RFC1-201ENST00000349703 TNRC6BQ9UPQ9 1833 aaKnown RBP4.41□□□□□ -1.7
RFC1-201ENST00000349703 C10orf142B7Z368 130 aa4.41□□□□□ -1.7
RFC1-201ENST00000349703 CFC1BP0CG36 223 aa4.41□□□□□ -1.7
RFC1-201ENST00000349703 CFC1P0CG37 223 aa4.41□□□□□ -1.7
RFC1-201ENST00000349703 CRYGAP11844 174 aa4.41□□□□□ -1.7
RFC1-201ENST00000349703 Q6ZRP5 223 aa4.41□□□□□ -1.7
RFC1-201ENST00000349703 SMAD5-AS1Q9Y6J3 95 aa4.41□□□□□ -1.7
RFC1-201ENST00000349703 UQCRQO14949 82 aa4.4□□□□□ -1.7
RFC1-201ENST00000349703 Q6ZQT7 251 aa4.4□□□□□ -1.7
RFC1-201ENST00000349703 LINC00574Q9H8X3 128 aa4.4□□□□□ -1.7
RFC1-201ENST00000349703 IGKV1-17P01599 117 aa4.4□□□□□ -1.7
RFC1-201ENST00000349703 C7orf65Q6ZTY9 151 aa4.4□□□□□ -1.7
RFC1-201ENST00000349703 LINC00694P0DN24 101 aa4.4□□□□□ -1.71
RFC1-201ENST00000349703 SS18Q15532 418 aa4.4□□□□□ -1.71
RFC1-201ENST00000349703 SPINT4Q6UDR6 99 aa4.4□□□□□ -1.71
RFC1-201ENST00000349703 Q8TAT8 98 aa4.4□□□□□ -1.71
RFC1-201ENST00000349703 IGKV2-29A2NJV5 120 aaPredicted RBP4.4□□□□□ -1.71
RFC1-201ENST00000349703 LHBP01229 141 aa4.4□□□□□ -1.71
RFC1-201ENST00000349703 NDUFA11Q86Y39 141 aa4.4□□□□□ -1.71
RFC1-201ENST00000349703 MUSTN1Q8IVN3 82 aa4.4□□□□□ -1.71
RFC1-201ENST00000349703 IGHV3-16A0A0C4DH30 117 aa4.39□□□□□ -1.71
RFC1-201ENST00000349703 IGLC6P0CF74 106 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms