RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 CDPF1Q6NVV7 123 aa9.71□□□□□ -0.86
HERPUD1-202ENST00000344114 RASL10AQ92737 203 aa9.71□□□□□ -0.86
HERPUD1-202ENST00000344114 HSPB8Q9UJY1 196 aa9.71□□□□□ -0.86
HERPUD1-202ENST00000344114 IGLV2-18A0A075B6J9 118 aa9.7□□□□□ -0.86
HERPUD1-202ENST00000344114 A8MWV9 139 aa9.7□□□□□ -0.86
HERPUD1-202ENST00000344114 HBDP02042 147 aa9.7□□□□□ -0.86
HERPUD1-202ENST00000344114 RPL35AP18077 110 aaKnown RBP9.7□□□□□ -0.86
HERPUD1-202ENST00000344114 BTF3P20290 206 aaKnown RBP9.7□□□□□ -0.86
HERPUD1-202ENST00000344114 SMIM2Q9BVW6 85 aa9.7□□□□□ -0.86
HERPUD1-202ENST00000344114 JPT2Q9H910 190 aa9.7□□□□□ -0.86
HERPUD1-202ENST00000344114 A0A087WWL8 130 aa9.69□□□□□ -0.86
HERPUD1-202ENST00000344114 K7EMI3 77 aa9.69□□□□□ -0.86
HERPUD1-202ENST00000344114 LY6G6CO95867 125 aa9.69□□□□□ -0.86
HERPUD1-202ENST00000344114 CRYGDP07320 174 aa9.69□□□□□ -0.86
HERPUD1-202ENST00000344114 SUMO2P61956 95 aaKnown RBP9.69□□□□□ -0.86
HERPUD1-202ENST00000344114 RPL32P62910 135 aaKnown RBP9.69□□□□□ -0.86
HERPUD1-202ENST00000344114 ZNF56Q15929 161 aa9.69□□□□□ -0.86
HERPUD1-202ENST00000344114 SUMO4Q6EEV6 95 aa9.69□□□□□ -0.86
HERPUD1-202ENST00000344114 TMEM263Q8WUH6 116 aaKnown RBP9.69□□□□□ -0.86
HERPUD1-202ENST00000344114 TMEM70Q9BUB7 260 aa9.69□□□□□ -0.86
HERPUD1-202ENST00000344114 HECTD4Q9Y4D8 3996 aa9.68□□□□□ -0.86
HERPUD1-202ENST00000344114 A0A096LNJ9 63 aa9.68□□□□□ -0.86
HERPUD1-202ENST00000344114 GIG44P09565 113 aaPredicted RBP9.68□□□□□ -0.86
HERPUD1-202ENST00000344114 FAM74A4Q5TZK3 123 aa9.68□□□□□ -0.86
HERPUD1-202ENST00000344114 IGHV3OR16-12A0A075B7B8 117 aa9.67□□□□□ -0.86
HERPUD1-202ENST00000344114 F5H697 171 aa9.67□□□□□ -0.86
HERPUD1-202ENST00000344114 RHODO00212 210 aa9.67□□□□□ -0.86
HERPUD1-202ENST00000344114 FCER1GP30273 86 aa9.67□□□□□ -0.86
HERPUD1-202ENST00000344114 TEX43Q6ZNM6 134 aa9.67□□□□□ -0.86
HERPUD1-202ENST00000344114 Q8N976 141 aa9.67□□□□□ -0.86
HERPUD1-202ENST00000344114 RNASE8Q8TDE3 154 aaKnown RBP9.67□□□□□ -0.86
HERPUD1-202ENST00000344114 RPL39LQ96EH5 51 aaKnown RBP9.67□□□□□ -0.86
HERPUD1-202ENST00000344114 C16orf74Q96GX8 76 aa9.67□□□□□ -0.86
HERPUD1-202ENST00000344114 MAP1LC3CQ9BXW4 147 aa9.67□□□□□ -0.86
HERPUD1-202ENST00000344114 TRBV6-5A0A0K0K1A5 114 aa9.66□□□□□ -0.86
HERPUD1-202ENST00000344114 C20orf202A1L168 122 aa9.66□□□□□ -0.86
HERPUD1-202ENST00000344114 H7C1H1 209 aa9.66□□□□□ -0.86
HERPUD1-202ENST00000344114 LAGE3Q14657 143 aa9.66□□□□□ -0.86
HERPUD1-202ENST00000344114 CSNK1G2-AS1Q8NCQ2 148 aa9.66□□□□□ -0.86
HERPUD1-202ENST00000344114 ST20Q9HBF5 79 aa9.66□□□□□ -0.86
HERPUD1-202ENST00000344114 PCLOQ9Y6V0 5065 aa9.66□□□□□ -0.86
HERPUD1-202ENST00000344114 SYS1-DBNDD2H3BUS1 97 aa9.65□□□□□ -0.86
HERPUD1-202ENST00000344114 AZU1P20160 251 aa9.65□□□□□ -0.86
HERPUD1-202ENST00000344114 ORMDL2Q53FV1 153 aa9.65□□□□□ -0.86
HERPUD1-202ENST00000344114 PET117Q6UWS5 81 aa9.65□□□□□ -0.86
HERPUD1-202ENST00000344114 ZNF705AQ6ZN79 300 aaPredicted RBP9.65□□□□□ -0.86
HERPUD1-202ENST00000344114 LINC00173Q6ZV60 143 aa9.65□□□□□ -0.86
HERPUD1-202ENST00000344114 CSTL1Q9H114 145 aa9.65□□□□□ -0.86
HERPUD1-202ENST00000344114 PRM2P04554 102 aa9.64□□□□□ -0.87
HERPUD1-202ENST00000344114 UFSP1Q6NVU6 142 aa9.64□□□□□ -0.87
HERPUD1-202ENST00000344114 MRPL16Q9NX20 251 aaKnown RBP9.64□□□□□ -0.87
HERPUD1-202ENST00000344114 NUPR2A6NF83 97 aa9.63□□□□□ -0.87
HERPUD1-202ENST00000344114 PCP4L1A6NKN8 68 aa9.63□□□□□ -0.87
HERPUD1-202ENST00000344114 TSTD3H0UI37 97 aa9.63□□□□□ -0.87
HERPUD1-202ENST00000344114 M0QY20 66 aa9.63□□□□□ -0.87
HERPUD1-202ENST00000344114 RS1O15537 224 aa9.63□□□□□ -0.87
HERPUD1-202ENST00000344114 PKIAP61925 76 aa9.63□□□□□ -0.87
HERPUD1-202ENST00000344114 RRN3P1Q2M238 152 aa9.63□□□□□ -0.87
HERPUD1-202ENST00000344114 LGALS9BQ3B8N2 356 aa9.63□□□□□ -0.87
HERPUD1-202ENST00000344114 CFAP126Q5VTH2 177 aa9.63□□□□□ -0.87
HERPUD1-202ENST00000344114 SPATA12Q7Z6I5 190 aa9.63□□□□□ -0.87
HERPUD1-202ENST00000344114 KIR2DL5BA0A0G2JN68 375 aa9.63□□□□□ -0.87
HERPUD1-202ENST00000344114 KIR2DL5BA0A0G2JPC4 375 aa9.63□□□□□ -0.87
HERPUD1-202ENST00000344114 POLR2KP53803 58 aaKnown RBP9.63□□□□□ -0.87
HERPUD1-202ENST00000344114 DAZ2Q13117 558 aaKnown RBP9.63□□□□□ -0.87
HERPUD1-202ENST00000344114 ZFP2Q6ZN57 461 aa9.63□□□□□ -0.87
HERPUD1-202ENST00000344114 KIR2DL5AQ8N109 375 aa9.63□□□□□ -0.87
HERPUD1-202ENST00000344114 KIR2DL5BQ8NHK3 375 aa9.63□□□□□ -0.87
HERPUD1-202ENST00000344114 OVOL2Q9BRP0 275 aa9.63□□□□□ -0.87
HERPUD1-202ENST00000344114 VAMP8Q9BV40 100 aa9.63□□□□□ -0.87
HERPUD1-202ENST00000344114 SDHAF1A6NFY7 115 aa9.62□□□□□ -0.87
HERPUD1-202ENST00000344114 LINC01549A6NIU2 74 aa9.62□□□□□ -0.87
HERPUD1-202ENST00000344114 VCYO14598 125 aa9.62□□□□□ -0.87
HERPUD1-202ENST00000344114 TCAPO15273 167 aa9.62□□□□□ -0.87
HERPUD1-202ENST00000344114 G0S2P27469 103 aa9.62□□□□□ -0.87
HERPUD1-202ENST00000344114 APOC4P55056 127 aa9.62□□□□□ -0.87
HERPUD1-202ENST00000344114 IFI27L1Q96BM0 104 aa9.62□□□□□ -0.87
HERPUD1-202ENST00000344114 KIR2DL4Q99706 377 aa9.62□□□□□ -0.87
HERPUD1-202ENST00000344114 DNAH10Q8IVF4 4471 aa9.61□□□□□ -0.87
HERPUD1-202ENST00000344114 TRGV1A0A0A0MS02 117 aa9.61□□□□□ -0.87
HERPUD1-202ENST00000344114 TRBV27A0A0K0K1C4 114 aa9.61□□□□□ -0.87
HERPUD1-202ENST00000344114 ATP5LO75964 103 aa9.61□□□□□ -0.87
HERPUD1-202ENST00000344114 NUDT3O95989 172 aa9.61□□□□□ -0.87
HERPUD1-202ENST00000344114 LINC01545Q5VT33 79 aa9.61□□□□□ -0.87
HERPUD1-202ENST00000344114 CEMP1Q6PRD7 247 aaPredicted RBP9.61□□□□□ -0.87
HERPUD1-202ENST00000344114 ZNF664Q8N3J9 261 aa9.61□□□□□ -0.87
HERPUD1-202ENST00000344114 TRAV4A0A0B4J268 109 aa9.6□□□□□ -0.87
HERPUD1-202ENST00000344114 PLAC8L1A1L4L8 177 aa9.6□□□□□ -0.87
HERPUD1-202ENST00000344114 SMIM9A6NGZ8 99 aa9.6□□□□□ -0.87
HERPUD1-202ENST00000344114 CIDEAO60543 219 aa9.6□□□□□ -0.87
HERPUD1-202ENST00000344114 IGHV3-53P01767 116 aa9.6□□□□□ -0.87
HERPUD1-202ENST00000344114 LGALS9CQ6DKI2 356 aa9.6□□□□□ -0.87
HERPUD1-202ENST00000344114 RHOHQ15669 191 aa9.59□□□□□ -0.87
HERPUD1-202ENST00000344114 OR4C5Q8NGB2 326 aa9.59□□□□□ -0.87
HERPUD1-202ENST00000344114 TOMM6Q96B49 74 aa9.59□□□□□ -0.87
HERPUD1-202ENST00000344114 DNAJC30Q96LL9 226 aa9.59□□□□□ -0.87
HERPUD1-202ENST00000344114 IGHV3-73A0A0B4J1V6 119 aa9.58□□□□□ -0.88
HERPUD1-202ENST00000344114 A0A0J9YWU9 116 aa9.58□□□□□ -0.88
HERPUD1-202ENST00000344114 Q6ZTI0 123 aa9.58□□□□□ -0.88
HERPUD1-202ENST00000344114 PRO1933Q9H354 126 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms