RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 GAGE4Q13068 117 aa9.44□□□□□ -0.9
SNRNP48-201ENST00000342415 GAGE5Q13069 117 aa9.44□□□□□ -0.9
SNRNP48-201ENST00000342415 DEFB112Q30KQ8 113 aa9.44□□□□□ -0.9
SNRNP48-201ENST00000342415 TACC2O95359 2948 aa9.44□□□□□ -0.9
SNRNP48-201ENST00000342415 RS1O15537 224 aa9.44□□□□□ -0.9
SNRNP48-201ENST00000342415 P0DMU3 169 aa9.44□□□□□ -0.9
SNRNP48-201ENST00000342415 FAM231AP0DMU4 169 aa9.44□□□□□ -0.9
SNRNP48-201ENST00000342415 FAM231CP0DMU5 169 aa9.44□□□□□ -0.9
SNRNP48-201ENST00000342415 TOMM6Q96B49 74 aa9.44□□□□□ -0.9
SNRNP48-201ENST00000342415 PEMTQ9UBM1 199 aa9.44□□□□□ -0.9
SNRNP48-201ENST00000342415 RAI1Q7Z5J4 1906 aaPredicted RBP9.44□□□□□ -0.9
SNRNP48-201ENST00000342415 TNRC6BQ9UPQ9 1833 aaKnown RBP9.43□□□□□ -0.9
SNRNP48-201ENST00000342415 PF4P02776 101 aa9.43□□□□□ -0.9
SNRNP48-201ENST00000342415 HTN3P15516 51 aa9.43□□□□□ -0.9
SNRNP48-201ENST00000342415 ZNF415Q09FC8 603 aa9.43□□□□□ -0.9
SNRNP48-201ENST00000342415 APRG1Q8IVJ8 170 aa9.43□□□□□ -0.9
SNRNP48-201ENST00000342415 IGF2-ASQ6U949 168 aa9.43□□□□□ -0.9
SNRNP48-201ENST00000342415 LENEPQ9Y5L5 61 aa9.43□□□□□ -0.9
SNRNP48-201ENST00000342415 NSUN5P1Q3KNT7 163 aa9.43□□□□□ -0.9
SNRNP48-201ENST00000342415 U3KQK5 164 aa9.43□□□□□ -0.9
SNRNP48-201ENST00000342415 TNFRSF13BO14836 293 aaPredicted RBP9.42□□□□□ -0.9
SNRNP48-201ENST00000342415 FOXI1Q12951 378 aa9.42□□□□□ -0.9
SNRNP48-201ENST00000342415 MRPS12O15235 138 aaKnown RBP9.42□□□□□ -0.9
SNRNP48-201ENST00000342415 MRPL53Q96EL3 112 aaKnown RBP9.42□□□□□ -0.9
SNRNP48-201ENST00000342415 HHLA3Q9XRX5 114 aa9.42□□□□□ -0.9
SNRNP48-201ENST00000342415 RPL36AP83881 106 aaKnown RBP9.42□□□□□ -0.9
SNRNP48-201ENST00000342415 RPL36ALQ969Q0 106 aaKnown RBP9.42□□□□□ -0.9
SNRNP48-201ENST00000342415 LMO4P61968 165 aa9.42□□□□□ -0.9
SNRNP48-201ENST00000342415 C10orf99Q6UWK7 81 aa9.42□□□□□ -0.9
SNRNP48-201ENST00000342415 C1QTNF4Q9BXJ3 329 aa9.42□□□□□ -0.9
SNRNP48-201ENST00000342415 B5MCH6 92 aa9.41□□□□□ -0.9
SNRNP48-201ENST00000342415 PAX4O43316 350 aa9.41□□□□□ -0.9
SNRNP48-201ENST00000342415 ZNF48Q96MX3 618 aaPredicted RBP9.41□□□□□ -0.9
SNRNP48-201ENST00000342415 PRM2P04554 102 aa9.41□□□□□ -0.9
SNRNP48-201ENST00000342415 TM2D2Q9BX73 214 aa9.41□□□□□ -0.9
SNRNP48-201ENST00000342415 ATMQ13315 3056 aa9.41□□□□□ -0.9
SNRNP48-201ENST00000342415 H3BMM0 161 aa9.41□□□□□ -0.9
SNRNP48-201ENST00000342415 HOXD3P31249 432 aaPredicted RBP9.41□□□□□ -0.9
SNRNP48-201ENST00000342415 ANKRD29Q8N6D5 301 aa9.41□□□□□ -0.9
SNRNP48-201ENST00000342415 UBE2WQ96B02 151 aa9.41□□□□□ -0.9
SNRNP48-201ENST00000342415 F8W735 103 aaPredicted RBP9.4□□□□□ -0.9
SNRNP48-201ENST00000342415 PFN2P35080 140 aa9.4□□□□□ -0.9
SNRNP48-201ENST00000342415 NRACQ8N912 160 aa9.4□□□□□ -0.9
SNRNP48-201ENST00000342415 COL4A2P08572 1712 aa9.4□□□□□ -0.9
SNRNP48-201ENST00000342415 DEFB130BP0DP73 79 aa9.4□□□□□ -0.9
SNRNP48-201ENST00000342415 DEFB130AP0DP74 79 aa9.4□□□□□ -0.9
SNRNP48-201ENST00000342415 SLURP1P55000 103 aa9.4□□□□□ -0.9
SNRNP48-201ENST00000342415 MORN3Q6PF18 240 aaPredicted RBP9.4□□□□□ -0.9
SNRNP48-201ENST00000342415 ZFAND2AQ8N6M9 145 aa9.4□□□□□ -0.9
SNRNP48-201ENST00000342415 SPANXB1Q9NS25 103 aaPredicted RBP9.4□□□□□ -0.9
SNRNP48-201ENST00000342415 TRAV12-1A0A0B4J245 112 aa9.4□□□□□ -0.91
SNRNP48-201ENST00000342415 FLNBO75369 2602 aaKnown RBP9.4□□□□□ -0.91
SNRNP48-201ENST00000342415 Q6ZS46 218 aa9.4□□□□□ -0.91
SNRNP48-201ENST00000342415 C3orf56Q8N813 242 aa9.4□□□□□ -0.91
SNRNP48-201ENST00000342415 TCL1BO95988 128 aa9.39□□□□□ -0.91
SNRNP48-201ENST00000342415 CARD19Q96LW7 228 aa9.39□□□□□ -0.91
SNRNP48-201ENST00000342415 TRAV26-1A0A087WT03 109 aa9.39□□□□□ -0.91
SNRNP48-201ENST00000342415 TEN1Q86WV5 123 aa9.39□□□□□ -0.91
SNRNP48-201ENST00000342415 C19orf84I3L1E1 186 aa9.38□□□□□ -0.91
SNRNP48-201ENST00000342415 MT-ATP8P03928 68 aa9.38□□□□□ -0.91
SNRNP48-201ENST00000342415 NEXN-AS1Q8NBZ9 246 aa9.38□□□□□ -0.91
SNRNP48-201ENST00000342415 COPS9Q8WXC6 57 aa9.38□□□□□ -0.91
SNRNP48-201ENST00000342415 ANKRD17O75179 2603 aaKnown RBP9.38□□□□□ -0.91
SNRNP48-201ENST00000342415 EDN2P20800 178 aa9.38□□□□□ -0.91
SNRNP48-201ENST00000342415 GAGE2AQ6NT46 116 aa9.38□□□□□ -0.91
SNRNP48-201ENST00000342415 NDUFA11Q86Y39 141 aa9.38□□□□□ -0.91
SNRNP48-201ENST00000342415 LINC01356Q8N9X3 169 aa9.38□□□□□ -0.91
SNRNP48-201ENST00000342415 C15orf53Q8NAA6 179 aa9.38□□□□□ -0.91
SNRNP48-201ENST00000342415 SS18L2Q9UHA2 77 aa9.38□□□□□ -0.91
SNRNP48-201ENST00000342415 INSP01308 110 aa9.37□□□□□ -0.91
SNRNP48-201ENST00000342415 GAGE7O76087 117 aa9.37□□□□□ -0.91
SNRNP48-201ENST00000342415 GAGE12FP0CL80 117 aa9.37□□□□□ -0.91
SNRNP48-201ENST00000342415 GAGE12GP0CL81 117 aa9.37□□□□□ -0.91
SNRNP48-201ENST00000342415 GAGE12IP0CL82 117 aa9.37□□□□□ -0.91
SNRNP48-201ENST00000342415 Q9H8V8 135 aa9.37□□□□□ -0.91
SNRNP48-201ENST00000342415 CLPSL1A2RUU4 121 aa9.36□□□□□ -0.91
SNRNP48-201ENST00000342415 A8MZ25 164 aa9.36□□□□□ -0.91
SNRNP48-201ENST00000342415 UFSP1Q6NVU6 142 aa9.36□□□□□ -0.91
SNRNP48-201ENST00000342415 CLEC2BQ92478 149 aa9.36□□□□□ -0.91
SNRNP48-201ENST00000342415 PROK1P58294 105 aa9.36□□□□□ -0.91
SNRNP48-201ENST00000342415 IGHV4OR15-8A0A075B7B6 117 aa9.36□□□□□ -0.91
SNRNP48-201ENST00000342415 A0A087WW49 117 aa9.36□□□□□ -0.91
SNRNP48-201ENST00000342415 U3KQE9 123 aa9.36□□□□□ -0.91
SNRNP48-201ENST00000342415 A0A096LPF7 62 aa9.35□□□□□ -0.91
SNRNP48-201ENST00000342415 PRSS47A8MTI9 375 aa9.35□□□□□ -0.91
SNRNP48-201ENST00000342415 CRPP02741 224 aa9.35□□□□□ -0.91
SNRNP48-201ENST00000342415 Q96MF0 132 aa9.35□□□□□ -0.91
SNRNP48-201ENST00000342415 C6orf226Q5I0X4 101 aa9.35□□□□□ -0.91
SNRNP48-201ENST00000342415 GAGE6Q13070 117 aa9.35□□□□□ -0.91
SNRNP48-201ENST00000342415 AKAP13Q12802 2813 aa9.35□□□□□ -0.91
SNRNP48-201ENST00000342415 A0A1W2PPR1 153 aa9.34□□□□□ -0.91
SNRNP48-201ENST00000342415 LEPROTO15243 131 aa9.34□□□□□ -0.91
SNRNP48-201ENST00000342415 IGHG2P01859 326 aa9.34□□□□□ -0.91
SNRNP48-201ENST00000342415 FBXL19-AS1Q494R0 122 aa9.34□□□□□ -0.91
SNRNP48-201ENST00000342415 A0A0J9YY99 117 aa9.34□□□□□ -0.91
SNRNP48-201ENST00000342415 NXPH4O95158 308 aa9.34□□□□□ -0.91
SNRNP48-201ENST00000342415 IGHG4P01861 327 aa9.34□□□□□ -0.91
SNRNP48-201ENST00000342415 RNASE3P12724 160 aaKnown RBP9.34□□□□□ -0.91
SNRNP48-201ENST00000342415 ZNF292O60281 2723 aa9.34□□□□□ -0.91
SNRNP48-201ENST00000342415 EBI3Q14213 229 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms