RNA–Protein interactions for RNA: ENST00000338353.3

FAM78B-201, Transcript of family with sequence similarity 78 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM78B, Length 1,597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78B-201ENST00000338353 CIDEAO60543 219 aa17.23■□□□□ 0.35
FAM78B-201ENST00000338353 ZNF56Q15929 161 aa17.23■□□□□ 0.35
FAM78B-201ENST00000338353 HHLA3Q9XRX5 114 aa17.23■□□□□ 0.35
FAM78B-201ENST00000338353 VPS13DQ5THJ4 4388 aa17.23■□□□□ 0.35
FAM78B-201ENST00000338353 H3BNG1 76 aa17.23■□□□□ 0.35
FAM78B-201ENST00000338353 PHOX2AO14813 284 aa17.23■□□□□ 0.35
FAM78B-201ENST00000338353 PAX4O43316 350 aa17.23■□□□□ 0.35
FAM78B-201ENST00000338353 PRO0255Q9UI72 69 aa17.23■□□□□ 0.35
FAM78B-201ENST00000338353 KMT2AQ03164 3969 aa17.22■□□□□ 0.35
FAM78B-201ENST00000338353 KIAA1644Q3SXP7 199 aa17.22■□□□□ 0.35
FAM78B-201ENST00000338353 MRAP2Q96G30 205 aa17.22■□□□□ 0.35
FAM78B-201ENST00000338353 IGHV3-73A0A0B4J1V6 119 aa17.21■□□□□ 0.35
FAM78B-201ENST00000338353 CRYBA4P53673 196 aa17.21■□□□□ 0.35
FAM78B-201ENST00000338353 F5H697 171 aa17.2■□□□□ 0.34
FAM78B-201ENST00000338353 D6R8Y8 96 aa17.19■□□□□ 0.34
FAM78B-201ENST00000338353 PPBPP02775 128 aa17.19■□□□□ 0.34
FAM78B-201ENST00000338353 SUMO4Q6EEV6 95 aa17.19■□□□□ 0.34
FAM78B-201ENST00000338353 TRAV26-2A0A0B4J265 109 aa17.19■□□□□ 0.34
FAM78B-201ENST00000338353 CKS2P33552 79 aa17.19■□□□□ 0.34
FAM78B-201ENST00000338353 ORMDL3Q8N138 153 aa17.19■□□□□ 0.34
FAM78B-201ENST00000338353 A0A096LPF7 62 aa17.18■□□□□ 0.34
FAM78B-201ENST00000338353 C1orf196B1AJZ1 125 aa17.18■□□□□ 0.34
FAM78B-201ENST00000338353 CCL18P55774 89 aa17.18■□□□□ 0.34
FAM78B-201ENST00000338353 SMKR1H3BMG3 65 aa17.17■□□□□ 0.34
FAM78B-201ENST00000338353 NCR2O95944 276 aa17.17■□□□□ 0.34
FAM78B-201ENST00000338353 ICOSQ9Y6W8 199 aa17.17■□□□□ 0.34
FAM78B-201ENST00000338353 SRIP30626 198 aa17.16■□□□□ 0.34
FAM78B-201ENST00000338353 ALKBH7Q9BT30 221 aaPredicted RBP17.16■□□□□ 0.34
FAM78B-201ENST00000338353 LINC00588Q9Y4M8 146 aa17.16■□□□□ 0.34
FAM78B-201ENST00000338353 PRELID3AQ96N28 172 aa17.15■□□□□ 0.34
FAM78B-201ENST00000338353 H7C1H1 209 aa17.15■□□□□ 0.34
FAM78B-201ENST00000338353 M0QY20 66 aa17.15■□□□□ 0.34
FAM78B-201ENST00000338353 GAS8-AS1O95177 125 aa17.15■□□□□ 0.34
FAM78B-201ENST00000338353 GATA1P15976 413 aaPredicted RBP17.15■□□□□ 0.34
FAM78B-201ENST00000338353 Q6ZSN1 163 aa17.15■□□□□ 0.34
FAM78B-201ENST00000338353 LAMTOR2Q9Y2Q5 125 aa17.15■□□□□ 0.34
FAM78B-201ENST00000338353 IGLV2-18A0A075B6J9 118 aa17.14■□□□□ 0.33
FAM78B-201ENST00000338353 ESRGQ1W209 222 aa17.14■□□□□ 0.33
FAM78B-201ENST00000338353 GYPEP15421 78 aa17.13■□□□□ 0.33
FAM78B-201ENST00000338353 PPP1R17O96001 155 aa17.12■□□□□ 0.33
FAM78B-201ENST00000338353 NPYP01303 97 aa17.12■□□□□ 0.33
FAM78B-201ENST00000338353 MRPL23Q16540 153 aaKnown RBP17.12■□□□□ 0.33
FAM78B-201ENST00000338353 NRACQ8N912 160 aa17.12■□□□□ 0.33
FAM78B-201ENST00000338353 K7EQD1 137 aa17.11■□□□□ 0.33
FAM78B-201ENST00000338353 M0R2N4 97 aa17.11■□□□□ 0.33
FAM78B-201ENST00000338353 RAB5BP61020 215 aa17.11■□□□□ 0.33
FAM78B-201ENST00000338353 LOC100131303A0A0U1RQF7 123 aa17.11■□□□□ 0.33
FAM78B-201ENST00000338353 TRBV6-4A0A1B0GX49 114 aa17.11■□□□□ 0.33
FAM78B-201ENST00000338353 HIST1H2BKO60814 126 aa17.11■□□□□ 0.33
FAM78B-201ENST00000338353 TNFRSF6BO95407 300 aa17.11■□□□□ 0.33
FAM78B-201ENST00000338353 HIST1H2BJP06899 126 aa17.11■□□□□ 0.33
FAM78B-201ENST00000338353 HIST1H2BOP23527 126 aa17.11■□□□□ 0.33
FAM78B-201ENST00000338353 HIST1H2BBP33778 126 aa17.11■□□□□ 0.33
FAM78B-201ENST00000338353 HIST1H2BDP58876 126 aa17.11■□□□□ 0.33
FAM78B-201ENST00000338353 HIST1H2BCP62807 126 aa17.11■□□□□ 0.33
FAM78B-201ENST00000338353 HIST2H2BEQ16778 126 aa17.11■□□□□ 0.33
FAM78B-201ENST00000338353 OR10J3Q5JRS4 329 aa17.11■□□□□ 0.33
FAM78B-201ENST00000338353 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.11■□□□□ 0.33
FAM78B-201ENST00000338353 HIST1H2BHQ93079 126 aa17.11■□□□□ 0.33
FAM78B-201ENST00000338353 RPL39LQ96EH5 51 aaKnown RBP17.11■□□□□ 0.33
FAM78B-201ENST00000338353 HIST1H2BNQ99877 126 aa17.11■□□□□ 0.33
FAM78B-201ENST00000338353 HIST1H2BMQ99879 126 aa17.11■□□□□ 0.33
FAM78B-201ENST00000338353 DNAH6Q9C0G6 4158 aa17.1■□□□□ 0.33
FAM78B-201ENST00000338353 SLC25A29Q8N8R3 303 aa17.1■□□□□ 0.33
FAM78B-201ENST00000338353 ZNRF2Q8NHG8 242 aa17.09■□□□□ 0.33
FAM78B-201ENST00000338353 C18orf32Q8TCD1 76 aa17.09■□□□□ 0.33
FAM78B-201ENST00000338353 NIT2Q9NQR4 276 aa17.09■□□□□ 0.33
FAM78B-201ENST00000338353 RHOHQ15669 191 aa17.08■□□□□ 0.32
FAM78B-201ENST00000338353 TRBV10-1A0A0K0K1A3 114 aa17.07■□□□□ 0.32
FAM78B-201ENST00000338353 NEGR1Q7Z3B1 354 aa17.07■□□□□ 0.32
FAM78B-201ENST00000338353 TRBV6-5A0A0K0K1A5 114 aa17.06■□□□□ 0.32
FAM78B-201ENST00000338353 NEXN-AS1Q8NBZ9 246 aa17.06■□□□□ 0.32
FAM78B-201ENST00000338353 PRADC1Q9BSG0 188 aa17.06■□□□□ 0.32
FAM78B-201ENST00000338353 DNAJC30Q96LL9 226 aa17.06■□□□□ 0.32
FAM78B-201ENST00000338353 C20orf78Q9BR46 151 aa17.06■□□□□ 0.32
FAM78B-201ENST00000338353 MAP1LC3AQ9H492 121 aa17.06■□□□□ 0.32
FAM78B-201ENST00000338353 MRPS16Q9Y3D3 137 aaKnown RBP17.06■□□□□ 0.32
FAM78B-201ENST00000338353 SUMO2P61956 95 aaKnown RBP17.05■□□□□ 0.32
FAM78B-201ENST00000338353 IQCJQ1A5X6 159 aa17.05■□□□□ 0.32
FAM78B-201ENST00000338353 ST20Q9HBF5 79 aa17.05■□□□□ 0.32
FAM78B-201ENST00000338353 PRSS47A8MTI9 375 aa17.04■□□□□ 0.32
FAM78B-201ENST00000338353 Q0VG73 95 aa17.04■□□□□ 0.32
FAM78B-201ENST00000338353 LYPD5Q6UWN5 251 aa17.04■□□□□ 0.32
FAM78B-201ENST00000338353 Q9H8V8 135 aa17.03■□□□□ 0.32
FAM78B-201ENST00000338353 Q9UF83 564 aa17.03■□□□□ 0.32
FAM78B-201ENST00000338353 TNFRSF18Q9Y5U5 241 aa17.03■□□□□ 0.32
FAM78B-201ENST00000338353 RPL32P62910 135 aaKnown RBP17.02■□□□□ 0.32
FAM78B-201ENST00000338353 RPL36AP83881 106 aaKnown RBP17.02■□□□□ 0.32
FAM78B-201ENST00000338353 RPL36ALQ969Q0 106 aaKnown RBP17.02■□□□□ 0.32
FAM78B-201ENST00000338353 UPK3BQ9BT76 320 aa17.02■□□□□ 0.32
FAM78B-201ENST00000338353 Q6ZR54 194 aa17.02■□□□□ 0.31
FAM78B-201ENST00000338353 SMIM2Q9BVW6 85 aa17.02■□□□□ 0.31
FAM78B-201ENST00000338353 TRBV7-3A0A075B6L6 115 aa17.01■□□□□ 0.31
FAM78B-201ENST00000338353 LOC389332A0A1B0GUA5 103 aa17.01■□□□□ 0.31
FAM78B-201ENST00000338353 SDHAF1A6NFY7 115 aa17.01■□□□□ 0.31
FAM78B-201ENST00000338353 TMEM70Q9BUB7 260 aa17.01■□□□□ 0.31
FAM78B-201ENST00000338353 POLR2KP53803 58 aaKnown RBP17■□□□□ 0.31
FAM78B-201ENST00000338353 TMA7Q9Y2S6 64 aaKnown RBP17■□□□□ 0.31
FAM78B-201ENST00000338353 NBDYA0A0U1RRE5 68 aa16.99■□□□□ 0.31
FAM78B-201ENST00000338353 PMCHP20382 165 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms