RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 UFSP1Q6NVU6 142 aa10.02□□□□□ -0.81
HLCS-201ENST00000336648 FANCD2OSQ96PS1 177 aa10.02□□□□□ -0.81
HLCS-201ENST00000336648 NDUFA7O95182 113 aa10.02□□□□□ -0.81
HLCS-201ENST00000336648 ENHOQ6UWT2 76 aa10.01□□□□□ -0.81
HLCS-201ENST00000336648 A0A0J9YX75 114 aa10.01□□□□□ -0.81
HLCS-201ENST00000336648 C19orf71A6NCJ1 209 aa10.01□□□□□ -0.81
HLCS-201ENST00000336648 H7C423 109 aa10.01□□□□□ -0.81
HLCS-201ENST00000336648 MIAQ16674 131 aa10.01□□□□□ -0.81
HLCS-201ENST00000336648 PRAC2D3DTV9 90 aa10.01□□□□□ -0.81
HLCS-201ENST00000336648 PLXNA2O75051 1894 aa10.01□□□□□ -0.81
HLCS-201ENST00000336648 CADP27708 2225 aa10.01□□□□□ -0.81
HLCS-201ENST00000336648 RITA1Q96K30 269 aa10□□□□□ -0.81
HLCS-201ENST00000336648 FBXL19-AS1Q494R0 122 aa10□□□□□ -0.81
HLCS-201ENST00000336648 NFE4Q86UQ8 179 aa10□□□□□ -0.81
HLCS-201ENST00000336648 KIR2DL5BQ8NHK3 375 aa10□□□□□ -0.81
HLCS-201ENST00000336648 USF3Q68DE3 2245 aa10□□□□□ -0.81
HLCS-201ENST00000336648 GRNP28799 593 aaKnown RBP10□□□□□ -0.81
HLCS-201ENST00000336648 SMAD5-AS1Q9Y6J3 95 aa10□□□□□ -0.81
HLCS-201ENST00000336648 SPRY2O43597 315 aa9.99□□□□□ -0.81
HLCS-201ENST00000336648 LRRC75A-AS1Q8N1F1 130 aa9.99□□□□□ -0.81
HLCS-201ENST00000336648 ROS1P08922 2347 aa9.99□□□□□ -0.81
HLCS-201ENST00000336648 CACNA1BQ00975 2339 aa9.99□□□□□ -0.81
HLCS-201ENST00000336648 SPRNQ5BIV9 151 aa9.99□□□□□ -0.81
HLCS-201ENST00000336648 TTTY13Q9BZ97 58 aa9.99□□□□□ -0.81
HLCS-201ENST00000336648 LOXL1Q08397 574 aaPredicted RBP9.99□□□□□ -0.81
HLCS-201ENST00000336648 SIRPDQ9H106 197 aa9.98□□□□□ -0.81
HLCS-201ENST00000336648 PKDREJQ9NTG1 2253 aa9.98□□□□□ -0.81
HLCS-201ENST00000336648 TICRRQ7Z2Z1 1910 aa9.98□□□□□ -0.81
HLCS-201ENST00000336648 SMIM9A6NGZ8 99 aa9.98□□□□□ -0.81
HLCS-201ENST00000336648 A6NDX4 124 aa9.98□□□□□ -0.81
HLCS-201ENST00000336648 Q8N7P7 452 aa9.98□□□□□ -0.81
HLCS-201ENST00000336648 KLK12Q9UKR0 248 aa9.98□□□□□ -0.81
HLCS-201ENST00000336648 DIDO1Q9BTC0 2240 aaKnown RBP9.97□□□□□ -0.81
HLCS-201ENST00000336648 SERP2Q8N6R1 65 aa9.97□□□□□ -0.81
HLCS-201ENST00000336648 KIAA1671Q9BY89 1806 aa9.97□□□□□ -0.81
HLCS-201ENST00000336648 ODF3L1Q8IXM7 274 aa9.97□□□□□ -0.81
HLCS-201ENST00000336648 COL6A6A6NMZ7 2263 aa9.97□□□□□ -0.81
HLCS-201ENST00000336648 TEX49A0A1B0GTD5 131 aa9.97□□□□□ -0.81
HLCS-201ENST00000336648 PIK3CD-AS1Q5SR53 167 aa9.97□□□□□ -0.81
HLCS-201ENST00000336648 RETNQ9HD89 108 aa9.97□□□□□ -0.81
HLCS-201ENST00000336648 SPTAN1Q13813 2472 aaKnown RBP9.96□□□□□ -0.81
HLCS-201ENST00000336648 DOCK8Q8NF50 2099 aa9.96□□□□□ -0.81
HLCS-201ENST00000336648 DOCK10Q96BY6 2186 aa9.96□□□□□ -0.82
HLCS-201ENST00000336648 SCXQ7RTU7 201 aa9.96□□□□□ -0.82
HLCS-201ENST00000336648 ADORA2A-AS1P86434 159 aa9.96□□□□□ -0.82
HLCS-201ENST00000336648 WFDC10BQ8IUB3 73 aa9.96□□□□□ -0.82
HLCS-201ENST00000336648 PLA2G2EQ9NZK7 142 aa9.96□□□□□ -0.82
HLCS-201ENST00000336648 A0A1B0GXF2 115 aa9.95□□□□□ -0.82
HLCS-201ENST00000336648 LINC00574Q9H8X3 128 aa9.95□□□□□ -0.82
HLCS-201ENST00000336648 A0A0J9YXY3 114 aa9.94□□□□□ -0.82
HLCS-201ENST00000336648 TNFRSF13BO14836 293 aaPredicted RBP9.94□□□□□ -0.82
HLCS-201ENST00000336648 DEFB135Q30KP9 77 aa9.94□□□□□ -0.82
HLCS-201ENST00000336648 DOCK7Q96N67 2140 aa9.94□□□□□ -0.82
HLCS-201ENST00000336648 EML6Q6ZMW3 1958 aa9.94□□□□□ -0.82
HLCS-201ENST00000336648 HEATR5AQ86XA9 2040 aa9.94□□□□□ -0.82
HLCS-201ENST00000336648 CREBBPQ92793 2442 aa9.94□□□□□ -0.82
HLCS-201ENST00000336648 MAP6D1Q9H9H5 199 aa9.94□□□□□ -0.82
HLCS-201ENST00000336648 TSC2P49815 1807 aa9.94□□□□□ -0.82
HLCS-201ENST00000336648 COL4A6Q14031 1691 aa9.94□□□□□ -0.82
HLCS-201ENST00000336648 ZNF407Q9C0G0 2248 aa9.94□□□□□ -0.82
HLCS-201ENST00000336648 FSTL3O95633 263 aa9.94□□□□□ -0.82
HLCS-201ENST00000336648 ZFAND2AQ8N6M9 145 aa9.94□□□□□ -0.82
HLCS-201ENST00000336648 C11orf1Q9H5F2 150 aa9.94□□□□□ -0.82
HLCS-201ENST00000336648 WDR81Q562E7 1941 aa9.93□□□□□ -0.82
HLCS-201ENST00000336648 WT1P19544 449 aaPredicted RBP9.93□□□□□ -0.82
HLCS-201ENST00000336648 IGLV2-14P01704 120 aa9.93□□□□□ -0.82
HLCS-201ENST00000336648 IMUPQ9GZP8 106 aa9.93□□□□□ -0.82
HLCS-201ENST00000336648 MALRD1Q5VYJ5 2156 aa9.93□□□□□ -0.82
HLCS-201ENST00000336648 TRBV27A0A0K0K1C4 114 aa9.93□□□□□ -0.82
HLCS-201ENST00000336648 FAM19A3Q7Z5A8 133 aa9.93□□□□□ -0.82
HLCS-201ENST00000336648 KMT2EQ8IZD2 1858 aa9.93□□□□□ -0.82
HLCS-201ENST00000336648 SNURFQ9Y675 71 aa9.93□□□□□ -0.82
HLCS-201ENST00000336648 ZFP36P26651 326 aaKnown RBP9.93□□□□□ -0.82
HLCS-201ENST00000336648 Q8N9L7 120 aa9.93□□□□□ -0.82
HLCS-201ENST00000336648 SMIM26A0A096LP01 95 aa9.92□□□□□ -0.82
HLCS-201ENST00000336648 NCOR1O75376 2440 aa9.92□□□□□ -0.82
HLCS-201ENST00000336648 P0C879 139 aa9.91□□□□□ -0.82
HLCS-201ENST00000336648 MRPS36P82909 103 aaKnown RBP9.91□□□□□ -0.82
HLCS-201ENST00000336648 IBA57-AS1B1ANH7 110 aa9.91□□□□□ -0.82
HLCS-201ENST00000336648 ESM1Q9NQ30 184 aa9.91□□□□□ -0.82
HLCS-201ENST00000336648 ODF3BA8MYP8 253 aa9.91□□□□□ -0.82
HLCS-201ENST00000336648 COX7CP15954 63 aa9.91□□□□□ -0.82
HLCS-201ENST00000336648 PMAIP1Q13794 54 aa9.91□□□□□ -0.82
HLCS-201ENST00000336648 TNRC6AQ8NDV7 1962 aaKnown RBP9.9□□□□□ -0.82
HLCS-201ENST00000336648 RLFQ13129 1914 aa9.9□□□□□ -0.82
HLCS-201ENST00000336648 REG3AQ06141 175 aa9.9□□□□□ -0.83
HLCS-201ENST00000336648 IGKV1D-37A0A075B6S9 117 aa9.9□□□□□ -0.83
HLCS-201ENST00000336648 A0A0J9YWU9 116 aa9.89□□□□□ -0.83
HLCS-201ENST00000336648 IGF1P05019 195 aa9.89□□□□□ -0.83
HLCS-201ENST00000336648 UNQ9165/PRO28630Q6UXU0 137 aa9.89□□□□□ -0.83
HLCS-201ENST00000336648 P0DMU3 169 aa9.89□□□□□ -0.83
HLCS-201ENST00000336648 FAM231AP0DMU4 169 aa9.89□□□□□ -0.83
HLCS-201ENST00000336648 FAM231CP0DMU5 169 aa9.89□□□□□ -0.83
HLCS-201ENST00000336648 C11orf45Q8TAV5 145 aa9.89□□□□□ -0.83
HLCS-201ENST00000336648 M0QXV9 152 aa9.89□□□□□ -0.83
HLCS-201ENST00000336648 NACAE9PAV3 2078 aa9.88□□□□□ -0.83
HLCS-201ENST00000336648 HIGD2AQ9BW72 106 aa9.88□□□□□ -0.83
HLCS-201ENST00000336648 RIF1Q5UIP0 2472 aaKnown RBP9.88□□□□□ -0.83
HLCS-201ENST00000336648 NEXN-AS1Q8NBZ9 246 aa9.88□□□□□ -0.83
HLCS-201ENST00000336648 SPRY4Q9C004 299 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms