RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 A0A1W2PRX2 142 aa10.46□□□□□ -0.73
VRK3-201ENST00000316763 CCL24O00175 119 aa10.46□□□□□ -0.73
VRK3-201ENST00000316763 SMIM13P0DJ93 91 aa10.46□□□□□ -0.73
VRK3-201ENST00000316763 GCSHP23434 173 aa10.46□□□□□ -0.73
VRK3-201ENST00000316763 POLR2KP53803 58 aaKnown RBP10.46□□□□□ -0.73
VRK3-201ENST00000316763 SPINK13Q1W4C9 94 aa10.46□□□□□ -0.73
VRK3-201ENST00000316763 BAALCQ8WXS3 180 aa10.46□□□□□ -0.73
VRK3-201ENST00000316763 MDFIQ99750 246 aa10.46□□□□□ -0.73
VRK3-201ENST00000316763 TTTY13Q9BZ97 58 aa10.46□□□□□ -0.73
VRK3-201ENST00000316763 JPT2Q9H910 190 aa10.46□□□□□ -0.73
VRK3-201ENST00000316763 COL6A5A8TX70 2615 aa10.46□□□□□ -0.73
VRK3-201ENST00000316763 TRGV11A0A075B6L2 103 aa10.46□□□□□ -0.74
VRK3-201ENST00000316763 GAGE10A6NGK3 116 aa10.46□□□□□ -0.74
VRK3-201ENST00000316763 TAL2Q16559 108 aa10.46□□□□□ -0.74
VRK3-201ENST00000316763 Q8N1Y9 231 aa10.46□□□□□ -0.74
VRK3-201ENST00000316763 PEMTQ9UBM1 199 aa10.46□□□□□ -0.74
VRK3-201ENST00000316763 TRBV6-5A0A0K0K1A5 114 aa10.45□□□□□ -0.74
VRK3-201ENST00000316763 OR11H12B2RN74 326 aa10.45□□□□□ -0.74
VRK3-201ENST00000316763 OR11H2Q8NH07 326 aa10.45□□□□□ -0.74
VRK3-201ENST00000316763 CITED1Q99966 193 aa10.45□□□□□ -0.74
VRK3-201ENST00000316763 MDFICQ9P1T7 246 aa10.45□□□□□ -0.74
VRK3-201ENST00000316763 PRSS29PA6NIE9 313 aa10.45□□□□□ -0.74
VRK3-201ENST00000316763 H3BUT2 72 aa10.45□□□□□ -0.74
VRK3-201ENST00000316763 PAPPA-AS1Q5QFB9 102 aa10.45□□□□□ -0.74
VRK3-201ENST00000316763 FAM74A4Q5TZK3 123 aa10.45□□□□□ -0.74
VRK3-201ENST00000316763 ZFP2Q6ZN57 461 aa10.45□□□□□ -0.74
VRK3-201ENST00000316763 TMEM141Q96I45 108 aa10.45□□□□□ -0.74
VRK3-201ENST00000316763 TRAV2A0A0B4J234 112 aa10.44□□□□□ -0.74
VRK3-201ENST00000316763 SDHAF1A6NFY7 115 aa10.44□□□□□ -0.74
VRK3-201ENST00000316763 ZNF56Q15929 161 aa10.44□□□□□ -0.74
VRK3-201ENST00000316763 NEGR1Q7Z3B1 354 aa10.44□□□□□ -0.74
VRK3-201ENST00000316763 CEND1Q8N111 149 aa10.44□□□□□ -0.74
VRK3-201ENST00000316763 C3orf56Q8N813 242 aa10.44□□□□□ -0.74
VRK3-201ENST00000316763 CBY1Q9Y3M2 126 aa10.44□□□□□ -0.74
VRK3-201ENST00000316763 AMTNQ6UX39 209 aa10.43□□□□□ -0.74
VRK3-201ENST00000316763 NDUFA11Q86Y39 141 aa10.43□□□□□ -0.74
VRK3-201ENST00000316763 MAPKAPK5-AS1Q8N8E1 139 aa10.43□□□□□ -0.74
VRK3-201ENST00000316763 RAB37Q96AX2 223 aa10.43□□□□□ -0.74
VRK3-201ENST00000316763 TM2D2Q9BX73 214 aa10.43□□□□□ -0.74
VRK3-201ENST00000316763 TP53TG1Q9Y2A0 90 aa10.43□□□□□ -0.74
VRK3-201ENST00000316763 AGRNO00468 2067 aa10.43□□□□□ -0.74
VRK3-201ENST00000316763 TRBV27A0A0K0K1C4 114 aa10.43□□□□□ -0.74
VRK3-201ENST00000316763 NSUN5P1Q3KNT7 163 aa10.43□□□□□ -0.74
VRK3-201ENST00000316763 TRPT1Q86TN4 253 aaKnown RBP10.43□□□□□ -0.74
VRK3-201ENST00000316763 STAB1Q9NY15 2570 aa10.42□□□□□ -0.74
VRK3-201ENST00000316763 MYMXA0A1B0GTQ4 84 aa10.42□□□□□ -0.74
VRK3-201ENST00000316763 FXYD2P54710 66 aa10.42□□□□□ -0.74
VRK3-201ENST00000316763 TIMM17AQ99595 171 aa10.42□□□□□ -0.74
VRK3-201ENST00000316763 E9PLD3 99 aa10.41□□□□□ -0.74
VRK3-201ENST00000316763 CRYGDP07320 174 aa10.41□□□□□ -0.74
VRK3-201ENST00000316763 DEFB131AP59861 70 aa10.41□□□□□ -0.74
VRK3-201ENST00000316763 PMVKQ15126 192 aa10.41□□□□□ -0.74
VRK3-201ENST00000316763 IGIPA6NJ69 53 aa10.41□□□□□ -0.74
VRK3-201ENST00000316763 K7EP34 96 aa10.41□□□□□ -0.74
VRK3-201ENST00000316763 M0QY20 66 aa10.41□□□□□ -0.74
VRK3-201ENST00000316763 RHOHQ15669 191 aa10.41□□□□□ -0.74
VRK3-201ENST00000316763 ZNF876PQ49A33 203 aa10.41□□□□□ -0.74
VRK3-201ENST00000316763 HIST1H4GQ99525 98 aa10.41□□□□□ -0.74
VRK3-201ENST00000316763 A0A1W2PPM0 123 aa10.4□□□□□ -0.74
VRK3-201ENST00000316763 GAGE12BA1L429 117 aa10.4□□□□□ -0.74
VRK3-201ENST00000316763 KNCNA6PVL3 124 aa10.4□□□□□ -0.74
VRK3-201ENST00000316763 FABP2P12104 132 aa10.4□□□□□ -0.74
VRK3-201ENST00000316763 HERVK_113P61574 105 aa10.4□□□□□ -0.74
VRK3-201ENST00000316763 RNASE8Q8TDE3 154 aaKnown RBP10.4□□□□□ -0.74
VRK3-201ENST00000316763 ZNF256Q9Y2P7 627 aaPredicted RBP10.4□□□□□ -0.74
VRK3-201ENST00000316763 A8MTW9 85 aa10.39□□□□□ -0.75
VRK3-201ENST00000316763 DEFB114Q30KQ6 69 aa10.39□□□□□ -0.75
VRK3-201ENST00000316763 SAMD5Q5TGI4 173 aa10.39□□□□□ -0.75
VRK3-201ENST00000316763 UFSP1Q6NVU6 142 aa10.39□□□□□ -0.75
VRK3-201ENST00000316763 SHISA2Q6UWI4 295 aa10.39□□□□□ -0.75
VRK3-201ENST00000316763 OR5A1Q8NGJ0 315 aa10.39□□□□□ -0.75
VRK3-201ENST00000316763 DYNLRB2Q8TF09 96 aa10.39□□□□□ -0.75
VRK3-201ENST00000316763 WNK1Q9H4A3 2382 aa10.39□□□□□ -0.75
VRK3-201ENST00000316763 H3BMM0 161 aa10.39□□□□□ -0.75
VRK3-201ENST00000316763 PRADC1Q9BSG0 188 aa10.39□□□□□ -0.75
VRK3-201ENST00000316763 CST9LQ9H4G1 147 aa10.39□□□□□ -0.75
VRK3-201ENST00000316763 NHP2Q9NX24 153 aaKnown RBP10.39□□□□□ -0.75
VRK3-201ENST00000316763 TSHBP01222 138 aa10.38□□□□□ -0.75
VRK3-201ENST00000316763 RPL39P62891 51 aaKnown RBP10.38□□□□□ -0.75
VRK3-201ENST00000316763 TMEM61Q8N0U2 210 aa10.38□□□□□ -0.75
VRK3-201ENST00000316763 NAA38Q9BRA0 125 aaKnown RBP10.38□□□□□ -0.75
VRK3-201ENST00000316763 SORL1Q92673 2214 aa10.38□□□□□ -0.75
VRK3-201ENST00000316763 KRTAP21-3Q3LHN1 58 aa10.37□□□□□ -0.75
VRK3-201ENST00000316763 MORN3Q6PF18 240 aaPredicted RBP10.37□□□□□ -0.75
VRK3-201ENST00000316763 SPCS1Q9Y6A9 102 aa10.37□□□□□ -0.75
VRK3-201ENST00000316763 I3L3M4 83 aa10.37□□□□□ -0.75
VRK3-201ENST00000316763 CD300EQ496F6 205 aaPredicted RBP10.37□□□□□ -0.75
VRK3-201ENST00000316763 IGLV4-69A0A075B6H9 119 aa10.36□□□□□ -0.75
VRK3-201ENST00000316763 TRAV25A0A0B4J276 109 aa10.36□□□□□ -0.75
VRK3-201ENST00000316763 C11orf86A6NJI1 115 aa10.36□□□□□ -0.75
VRK3-201ENST00000316763 ZNF815PA8K554 130 aa10.36□□□□□ -0.75
VRK3-201ENST00000316763 EDA2RQ9HAV5 297 aa10.36□□□□□ -0.75
VRK3-201ENST00000316763 TRBV7-3A0A075B6L6 115 aa10.35□□□□□ -0.75
VRK3-201ENST00000316763 HTN1P15515 57 aa10.35□□□□□ -0.75
VRK3-201ENST00000316763 ZNF415Q09FC8 603 aa10.35□□□□□ -0.75
VRK3-201ENST00000316763 PIK3CD-AS1Q5SR53 167 aa10.35□□□□□ -0.75
VRK3-201ENST00000316763 DEFB104AQ8WTQ1 72 aa10.35□□□□□ -0.75
VRK3-201ENST00000316763 PHLDA1Q8WV24 401 aaPredicted RBP10.35□□□□□ -0.75
VRK3-201ENST00000316763 M0R2P5 195 aa10.35□□□□□ -0.75
VRK3-201ENST00000316763 RBMY1A1P0DJD3 496 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms