RNA–Protein interactions for RNA: ENST00000298454.3

VSTM4-201, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VSTM4, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-201ENST00000298454 P0DMU3 169 aa16.44■□□□□ 0.22
VSTM4-201ENST00000298454 FAM231AP0DMU4 169 aa16.44■□□□□ 0.22
VSTM4-201ENST00000298454 FAM231CP0DMU5 169 aa16.44■□□□□ 0.22
VSTM4-201ENST00000298454 ZFP2Q6ZN57 461 aa16.44■□□□□ 0.22
VSTM4-201ENST00000298454 Q6ZSN1 163 aa16.44■□□□□ 0.22
VSTM4-201ENST00000298454 CSNK1G2-AS1Q8NCQ2 148 aa16.44■□□□□ 0.22
VSTM4-201ENST00000298454 KIR2DL4Q99706 377 aa16.44■□□□□ 0.22
VSTM4-201ENST00000298454 SCGB3A1Q96QR1 104 aa16.43■□□□□ 0.22
VSTM4-201ENST00000298454 TEP1Q99973 2627 aaKnown RBP16.43■□□□□ 0.22
VSTM4-201ENST00000298454 Q6ZN92 141 aa16.43■□□□□ 0.22
VSTM4-201ENST00000298454 GTSCR1Q86UQ5 136 aa16.43■□□□□ 0.22
VSTM4-201ENST00000298454 TMEM263Q8WUH6 116 aaKnown RBP16.43■□□□□ 0.22
VSTM4-201ENST00000298454 TP73-AS1Q9UF72 201 aa16.43■□□□□ 0.22
VSTM4-201ENST00000298454 CYSRT1A8MQ03 144 aa16.42■□□□□ 0.22
VSTM4-201ENST00000298454 C1QTNF4Q9BXJ3 329 aa16.42■□□□□ 0.22
VSTM4-201ENST00000298454 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.41■□□□□ 0.22
VSTM4-201ENST00000298454 EDA2RQ9HAV5 297 aa16.41■□□□□ 0.22
VSTM4-201ENST00000298454 TRGV1A0A0A0MS02 117 aa16.41■□□□□ 0.22
VSTM4-201ENST00000298454 H7C1H1 209 aa16.41■□□□□ 0.22
VSTM4-201ENST00000298454 Q9UF83 564 aa16.41■□□□□ 0.22
VSTM4-201ENST00000298454 RS1O15537 224 aa16.4■□□□□ 0.22
VSTM4-201ENST00000298454 STPG4Q8N801 248 aa16.4■□□□□ 0.22
VSTM4-201ENST00000298454 NACAE9PAV3 2078 aa16.4■□□□□ 0.22
VSTM4-201ENST00000298454 EREGO14944 169 aa16.4■□□□□ 0.22
VSTM4-201ENST00000298454 CTAG1AP78358 180 aa16.4■□□□□ 0.22
VSTM4-201ENST00000298454 SNHG12Q9BXW3 62 aa16.39■□□□□ 0.21
VSTM4-201ENST00000298454 TP53TG1Q9Y2A0 90 aa16.39■□□□□ 0.21
VSTM4-201ENST00000298454 NOTCH3Q9UM47 2321 aa16.39■□□□□ 0.21
VSTM4-201ENST00000298454 TCTAP57738 103 aa16.38■□□□□ 0.21
VSTM4-201ENST00000298454 ANKRD39Q53RE8 183 aa16.38■□□□□ 0.21
VSTM4-201ENST00000298454 ZMAT4Q9H898 229 aa16.38■□□□□ 0.21
VSTM4-201ENST00000298454 RHODO00212 210 aa16.38■□□□□ 0.21
VSTM4-201ENST00000298454 HNRNPA3P51991 378 aaKnown RBP16.38■□□□□ 0.21
VSTM4-201ENST00000298454 Q6ZTI0 123 aa16.38■□□□□ 0.21
VSTM4-201ENST00000298454 CYSLTR1Q9Y271 337 aa16.38■□□□□ 0.21
VSTM4-201ENST00000298454 PLAC8L1A1L4L8 177 aa16.37■□□□□ 0.21
VSTM4-201ENST00000298454 RPL39P62891 51 aaKnown RBP16.37■□□□□ 0.21
VSTM4-201ENST00000298454 NOP10Q9NPE3 64 aaKnown RBP16.37■□□□□ 0.21
VSTM4-201ENST00000298454 MRPL35Q9NZE8 188 aaKnown RBP16.37■□□□□ 0.21
VSTM4-201ENST00000298454 TSHBP01222 138 aa16.37■□□□□ 0.21
VSTM4-201ENST00000298454 ERASQ7Z444 233 aa16.37■□□□□ 0.21
VSTM4-201ENST00000298454 TRRAPQ9Y4A5 3859 aa16.36■□□□□ 0.21
VSTM4-201ENST00000298454 I3L3M4 83 aa16.36■□□□□ 0.21
VSTM4-201ENST00000298454 KRTAP24-1Q3LI83 254 aa16.36■□□□□ 0.21
VSTM4-201ENST00000298454 A0A087WX48 190 aa16.36■□□□□ 0.21
VSTM4-201ENST00000298454 RIPPLY3P57055 190 aa16.36■□□□□ 0.21
VSTM4-201ENST00000298454 C16orf74Q96GX8 76 aa16.36■□□□□ 0.21
VSTM4-201ENST00000298454 M0R143 59 aa16.35■□□□□ 0.21
VSTM4-201ENST00000298454 IGHV3-53P01767 116 aa16.35■□□□□ 0.21
VSTM4-201ENST00000298454 IGKCP01834 107 aa16.35■□□□□ 0.21
VSTM4-201ENST00000298454 OR4C5Q8NGB2 326 aa16.35■□□□□ 0.21
VSTM4-201ENST00000298454 BAALCQ8WXS3 180 aa16.35■□□□□ 0.21
VSTM4-201ENST00000298454 G0S2P27469 103 aa16.34■□□□□ 0.21
VSTM4-201ENST00000298454 RRN3P1Q2M238 152 aa16.34■□□□□ 0.21
VSTM4-201ENST00000298454 NEXN-AS1Q8NBZ9 246 aa16.34■□□□□ 0.21
VSTM4-201ENST00000298454 ZNF479Q96JC4 524 aa16.34■□□□□ 0.21
VSTM4-201ENST00000298454 HHLA3Q9XRX5 114 aa16.34■□□□□ 0.21
VSTM4-201ENST00000298454 TNFRSF18Q9Y5U5 241 aa16.34■□□□□ 0.21
VSTM4-201ENST00000298454 DPM2O94777 84 aa16.34■□□□□ 0.21
VSTM4-201ENST00000298454 DAZ2Q13117 558 aaKnown RBP16.34■□□□□ 0.21
VSTM4-201ENST00000298454 WFDC9Q8NEX5 89 aa16.34■□□□□ 0.21
VSTM4-201ENST00000298454 BAHCC1Q9P281 2608 aa16.33■□□□□ 0.21
VSTM4-201ENST00000298454 TRAV12-1A0A0B4J245 112 aa16.33■□□□□ 0.2
VSTM4-201ENST00000298454 SLC25A34Q6PIV7 304 aa16.33■□□□□ 0.2
VSTM4-201ENST00000298454 IGIPA6NJ69 53 aa16.33■□□□□ 0.2
VSTM4-201ENST00000298454 RHOHQ15669 191 aa16.32■□□□□ 0.2
VSTM4-201ENST00000298454 COX8AP10176 69 aa16.31■□□□□ 0.2
VSTM4-201ENST00000298454 MRPS16Q9Y3D3 137 aaKnown RBP16.3■□□□□ 0.2
VSTM4-201ENST00000298454 CHTOPQ9Y3Y2 248 aaKnown RBP16.3■□□□□ 0.2
VSTM4-201ENST00000298454 PRSS29PA6NIE9 313 aa16.29■□□□□ 0.2
VSTM4-201ENST00000298454 LINC01549A6NIU2 74 aa16.29■□□□□ 0.2
VSTM4-201ENST00000298454 F8VRH5 84 aa16.29■□□□□ 0.2
VSTM4-201ENST00000298454 TRAV4A0A0B4J268 109 aa16.28■□□□□ 0.2
VSTM4-201ENST00000298454 GAGE12BA1L429 117 aa16.28■□□□□ 0.2
VSTM4-201ENST00000298454 GAGE7O76087 117 aa16.28■□□□□ 0.2
VSTM4-201ENST00000298454 GAGE12FP0CL80 117 aa16.28■□□□□ 0.2
VSTM4-201ENST00000298454 GAGE12GP0CL81 117 aa16.28■□□□□ 0.2
VSTM4-201ENST00000298454 GAGE12IP0CL82 117 aa16.28■□□□□ 0.2
VSTM4-201ENST00000298454 ZC2HC1BQ5TFG8 222 aa16.28■□□□□ 0.2
VSTM4-201ENST00000298454 C20orf203Q8NBC4 194 aa16.28■□□□□ 0.2
VSTM4-201ENST00000298454 C2orf88Q9BSF0 95 aa16.28■□□□□ 0.2
VSTM4-201ENST00000298454 BATFQ16520 125 aa16.28■□□□□ 0.2
VSTM4-201ENST00000298454 MRPL52Q86TS9 123 aaKnown RBP16.28■□□□□ 0.2
VSTM4-201ENST00000298454 NMUP48645 174 aa16.27■□□□□ 0.2
VSTM4-201ENST00000298454 DNAJC30Q96LL9 226 aa16.27■□□□□ 0.2
VSTM4-201ENST00000298454 TIMM17AQ99595 171 aa16.27■□□□□ 0.2
VSTM4-201ENST00000298454 OVOL2Q9BRP0 275 aa16.27■□□□□ 0.2
VSTM4-201ENST00000298454 FGF6P10767 208 aa16.27■□□□□ 0.19
VSTM4-201ENST00000298454 LBHQ53QV2 105 aaPredicted RBP16.27■□□□□ 0.19
VSTM4-201ENST00000298454 TMEM141Q96I45 108 aa16.27■□□□□ 0.19
VSTM4-201ENST00000298454 FBN1P35555 2871 aaKnown RBP16.26■□□□□ 0.19
VSTM4-201ENST00000298454 IGHV3-38A0A0C4DH36 116 aa16.26■□□□□ 0.19
VSTM4-201ENST00000298454 PLNP26678 52 aa16.26■□□□□ 0.19
VSTM4-201ENST00000298454 EMP1P54849 157 aa16.26■□□□□ 0.19
VSTM4-201ENST00000298454 PHLDA1Q8WV24 401 aaPredicted RBP16.26■□□□□ 0.19
VSTM4-201ENST00000298454 IGKV2D-26A0A0A0MRZ7 120 aa16.26■□□□□ 0.19
VSTM4-201ENST00000298454 TRGV2A0A075B6R0 118 aa16.25■□□□□ 0.19
VSTM4-201ENST00000298454 OPRPNQ99935 248 aaPredicted RBP16.25■□□□□ 0.19
VSTM4-201ENST00000298454 PCP2Q8IVA1 136 aa16.24■□□□□ 0.19
VSTM4-201ENST00000298454 WIPF1O43516 503 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 186.7 ms