RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 OPRPNQ99935 248 aaPredicted RBP11.67□□□□□ -0.54
NCKIPSD-201ENST00000294129 NOTCH2Q04721 2471 aa11.67□□□□□ -0.54
NCKIPSD-201ENST00000294129 AKAP9Q99996 3911 aa11.67□□□□□ -0.54
NCKIPSD-201ENST00000294129 FOXI2Q6ZQN5 318 aa11.67□□□□□ -0.54
NCKIPSD-201ENST00000294129 DYNLRB2Q8TF09 96 aa11.67□□□□□ -0.54
NCKIPSD-201ENST00000294129 VCYO14598 125 aa11.67□□□□□ -0.54
NCKIPSD-201ENST00000294129 POLR2KP53803 58 aaKnown RBP11.67□□□□□ -0.54
NCKIPSD-201ENST00000294129 DLX4Q92988 240 aaPredicted RBP11.67□□□□□ -0.54
NCKIPSD-201ENST00000294129 LINC01619G3V211 115 aa11.66□□□□□ -0.54
NCKIPSD-201ENST00000294129 TSHBP01222 138 aa11.66□□□□□ -0.54
NCKIPSD-201ENST00000294129 CRYGDP07320 174 aa11.66□□□□□ -0.54
NCKIPSD-201ENST00000294129 AMTNQ6UX39 209 aa11.66□□□□□ -0.54
NCKIPSD-201ENST00000294129 PRADC1Q9BSG0 188 aa11.66□□□□□ -0.54
NCKIPSD-201ENST00000294129 P0DMU3 169 aa11.66□□□□□ -0.54
NCKIPSD-201ENST00000294129 FAM231AP0DMU4 169 aa11.66□□□□□ -0.54
NCKIPSD-201ENST00000294129 FAM231CP0DMU5 169 aa11.66□□□□□ -0.54
NCKIPSD-201ENST00000294129 PROK1P58294 105 aa11.66□□□□□ -0.54
NCKIPSD-201ENST00000294129 HELZ2Q9BYK8 2649 aaKnown RBP11.66□□□□□ -0.54
NCKIPSD-201ENST00000294129 MORN3Q6PF18 240 aaPredicted RBP11.65□□□□□ -0.54
NCKIPSD-201ENST00000294129 CEND1Q8N111 149 aa11.65□□□□□ -0.54
NCKIPSD-201ENST00000294129 ODF3Q96PU9 254 aa11.65□□□□□ -0.54
NCKIPSD-201ENST00000294129 HIGD1BQ9P298 99 aa11.65□□□□□ -0.54
NCKIPSD-201ENST00000294129 C11orf86A6NJI1 115 aa11.64□□□□□ -0.55
NCKIPSD-201ENST00000294129 M0QY20 66 aa11.64□□□□□ -0.55
NCKIPSD-201ENST00000294129 TEX48A0A1B0GUV7 120 aa11.64□□□□□ -0.55
NCKIPSD-201ENST00000294129 RBMY1BA6NDE4 496 aaKnown RBP11.64□□□□□ -0.55
NCKIPSD-201ENST00000294129 RBMY1EA6NEQ0 496 aaKnown RBP11.64□□□□□ -0.55
NCKIPSD-201ENST00000294129 RBMY1DP0C7P1 496 aaKnown RBP11.64□□□□□ -0.55
NCKIPSD-201ENST00000294129 TMEM170BQ5T4T1 132 aa11.64□□□□□ -0.55
NCKIPSD-201ENST00000294129 POM121L12Q8N7R1 296 aa11.64□□□□□ -0.55
NCKIPSD-201ENST00000294129 ZNF815PA8K554 130 aa11.63□□□□□ -0.55
NCKIPSD-201ENST00000294129 SCGB1D4Q6XE38 83 aa11.63□□□□□ -0.55
NCKIPSD-201ENST00000294129 KRTAP1-3Q8IUG1 177 aa11.63□□□□□ -0.55
NCKIPSD-201ENST00000294129 MYMXA0A1B0GTQ4 84 aa11.63□□□□□ -0.55
NCKIPSD-201ENST00000294129 TMEM238C9JI98 176 aa11.63□□□□□ -0.55
NCKIPSD-201ENST00000294129 PHLDA1Q8WV24 401 aaPredicted RBP11.63□□□□□ -0.55
NCKIPSD-201ENST00000294129 IGHV3OR16-12A0A075B7B8 117 aa11.62□□□□□ -0.55
NCKIPSD-201ENST00000294129 IGIPA6NJ69 53 aa11.62□□□□□ -0.55
NCKIPSD-201ENST00000294129 H3BMM0 161 aa11.62□□□□□ -0.55
NCKIPSD-201ENST00000294129 TRGV11A0A075B6L2 103 aa11.61□□□□□ -0.55
NCKIPSD-201ENST00000294129 RNF152Q8N8N0 203 aa11.61□□□□□ -0.55
NCKIPSD-201ENST00000294129 PEMTQ9UBM1 199 aa11.61□□□□□ -0.55
NCKIPSD-201ENST00000294129 Q9UF83 564 aa11.61□□□□□ -0.55
NCKIPSD-201ENST00000294129 IGHV3-64A0A075B6Q5 118 aa11.61□□□□□ -0.55
NCKIPSD-201ENST00000294129 PMVKQ15126 192 aa11.61□□□□□ -0.55
NCKIPSD-201ENST00000294129 Q6ZSV7 163 aa11.61□□□□□ -0.55
NCKIPSD-201ENST00000294129 PLEKHB2Q96CS7 222 aa11.61□□□□□ -0.55
NCKIPSD-201ENST00000294129 TM2D2Q9BX73 214 aa11.61□□□□□ -0.55
NCKIPSD-201ENST00000294129 IGLV4-69A0A075B6H9 119 aa11.6□□□□□ -0.55
NCKIPSD-201ENST00000294129 TRBV27A0A0K0K1C4 114 aa11.6□□□□□ -0.55
NCKIPSD-201ENST00000294129 C4orf3Q8WVX3 66 aa11.6□□□□□ -0.55
NCKIPSD-201ENST00000294129 TRPT1Q86TN4 253 aaKnown RBP11.6□□□□□ -0.55
NCKIPSD-201ENST00000294129 MTURNQ8N3F0 131 aa11.6□□□□□ -0.55
NCKIPSD-201ENST00000294129 LINC01587Q99440 93 aa11.6□□□□□ -0.55
NCKIPSD-201ENST00000294129 DNAJC9-AS1A6NH13 148 aa11.59□□□□□ -0.55
NCKIPSD-201ENST00000294129 E9PLD3 99 aa11.59□□□□□ -0.55
NCKIPSD-201ENST00000294129 MAP6D1Q9H9H5 199 aa11.59□□□□□ -0.55
NCKIPSD-201ENST00000294129 WFDC2Q14508 124 aa11.59□□□□□ -0.55
NCKIPSD-201ENST00000294129 LRRC75A-AS1Q8N1F1 130 aa11.59□□□□□ -0.55
NCKIPSD-201ENST00000294129 XCL2Q9UBD3 114 aa11.59□□□□□ -0.55
NCKIPSD-201ENST00000294129 FASNP49327 2511 aaKnown RBP11.59□□□□□ -0.55
NCKIPSD-201ENST00000294129 IGLL5B9A064 214 aa11.58□□□□□ -0.55
NCKIPSD-201ENST00000294129 H3BMG7 143 aa11.58□□□□□ -0.55
NCKIPSD-201ENST00000294129 RNASE13Q5GAN3 156 aaKnown RBP11.58□□□□□ -0.56
NCKIPSD-201ENST00000294129 ZNRF2Q8NHG8 242 aa11.58□□□□□ -0.56
NCKIPSD-201ENST00000294129 ZNF479Q96JC4 524 aa11.58□□□□□ -0.56
NCKIPSD-201ENST00000294129 SETXQ7Z333 2677 aaKnown RBP11.58□□□□□ -0.56
NCKIPSD-201ENST00000294129 SRSF9Q13242 221 aaKnown RBP eCLIP11.58□□□□□ -0.56
NCKIPSD-201ENST00000294129 C12orf74Q32Q52 190 aa11.58□□□□□ -0.56
NCKIPSD-201ENST00000294129 SFTA2Q6UW10 78 aa11.58□□□□□ -0.56
NCKIPSD-201ENST00000294129 Q8N2B8 174 aa11.58□□□□□ -0.56
NCKIPSD-201ENST00000294129 TRBV6-5A0A0K0K1A5 114 aa11.57□□□□□ -0.56
NCKIPSD-201ENST00000294129 CEMP1Q6PRD7 247 aaPredicted RBP11.57□□□□□ -0.56
NCKIPSD-201ENST00000294129 SPAG8Q99932 426 aaPredicted RBP11.57□□□□□ -0.56
NCKIPSD-201ENST00000294129 MRPL16Q9NX20 251 aaKnown RBP11.57□□□□□ -0.56
NCKIPSD-201ENST00000294129 DEFB114Q30KQ6 69 aa11.57□□□□□ -0.56
NCKIPSD-201ENST00000294129 ESM1Q9NQ30 184 aa11.57□□□□□ -0.56
NCKIPSD-201ENST00000294129 RPL32P62910 135 aaKnown RBP11.56□□□□□ -0.56
NCKIPSD-201ENST00000294129 I3L3M4 83 aa11.56□□□□□ -0.56
NCKIPSD-201ENST00000294129 SH2D6Q7Z4S9 175 aa11.56□□□□□ -0.56
NCKIPSD-201ENST00000294129 TMEM141Q96I45 108 aa11.56□□□□□ -0.56
NCKIPSD-201ENST00000294129 RAX2Q96IS3 184 aa11.56□□□□□ -0.56
NCKIPSD-201ENST00000294129 GTSF1LQ9H1H1 148 aa11.56□□□□□ -0.56
NCKIPSD-201ENST00000294129 TRBV7-3A0A075B6L6 115 aa11.55□□□□□ -0.56
NCKIPSD-201ENST00000294129 CD28P10747 220 aa11.55□□□□□ -0.56
NCKIPSD-201ENST00000294129 TSPEAR-AS2P59090 65 aa11.55□□□□□ -0.56
NCKIPSD-201ENST00000294129 HERVK_113P61574 105 aa11.55□□□□□ -0.56
NCKIPSD-201ENST00000294129 Q6ZSN1 163 aa11.55□□□□□ -0.56
NCKIPSD-201ENST00000294129 TIMM17AQ99595 171 aa11.55□□□□□ -0.56
NCKIPSD-201ENST00000294129 IGHV3-38A0A0C4DH36 116 aa11.55□□□□□ -0.56
NCKIPSD-201ENST00000294129 FN1P02751 2386 aaKnown RBP11.55□□□□□ -0.56
NCKIPSD-201ENST00000294129 ETDBQ3ZM63 59 aa11.55□□□□□ -0.56
NCKIPSD-201ENST00000294129 HECTD1Q9ULT8 2610 aa11.54□□□□□ -0.56
NCKIPSD-201ENST00000294129 C20orf203Q8NBC4 194 aa11.54□□□□□ -0.56
NCKIPSD-201ENST00000294129 TNFRSF18Q9Y5U5 241 aa11.54□□□□□ -0.56
NCKIPSD-201ENST00000294129 YAE1D1Q9NRH1 226 aa11.53□□□□□ -0.56
NCKIPSD-201ENST00000294129 M0R2P5 195 aa11.53□□□□□ -0.56
NCKIPSD-201ENST00000294129 ZNF415Q09FC8 603 aa11.53□□□□□ -0.56
NCKIPSD-201ENST00000294129 A0A0J9YXV3 536 aa11.52□□□□□ -0.56
NCKIPSD-201ENST00000294129 APOMO95445 188 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms