RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 AMTNQ6UX39 209 aa4.45□□□□□ -1.7
TNFSF4-201ENST00000281834 ZNF418Q8TF45 676 aaPredicted RBP4.45□□□□□ -1.7
TNFSF4-201ENST00000281834 CYSLTR1Q9Y271 337 aa4.45□□□□□ -1.7
TNFSF4-201ENST00000281834 MAST4O15021 2626 aa4.45□□□□□ -1.7
TNFSF4-201ENST00000281834 K7ERJ3 54 aa4.45□□□□□ -1.7
TNFSF4-201ENST00000281834 HLA-DRB4P13762 266 aa4.45□□□□□ -1.7
TNFSF4-201ENST00000281834 LINC00315P59091 139 aa4.45□□□□□ -1.7
TNFSF4-201ENST00000281834 HLA-DRB4X5D2U9 266 aa4.45□□□□□ -1.7
TNFSF4-201ENST00000281834 TRGV1A0A0A0MS02 117 aa4.44□□□□□ -1.7
TNFSF4-201ENST00000281834 OR11H12B2RN74 326 aa4.44□□□□□ -1.7
TNFSF4-201ENST00000281834 CRYGDP07320 174 aa4.44□□□□□ -1.7
TNFSF4-201ENST00000281834 ODF3L2Q3SX64 289 aa4.44□□□□□ -1.7
TNFSF4-201ENST00000281834 SFTA2Q6UW10 78 aa4.44□□□□□ -1.7
TNFSF4-201ENST00000281834 ZFP2Q6ZN57 461 aa4.44□□□□□ -1.7
TNFSF4-201ENST00000281834 SPAG8Q99932 426 aaPredicted RBP4.44□□□□□ -1.7
TNFSF4-201ENST00000281834 HHLA3Q9XRX5 114 aa4.44□□□□□ -1.7
TNFSF4-201ENST00000281834 TRGV11A0A075B6L2 103 aa4.44□□□□□ -1.7
TNFSF4-201ENST00000281834 FGF6P10767 208 aa4.44□□□□□ -1.7
TNFSF4-201ENST00000281834 AZU1P20160 251 aa4.44□□□□□ -1.7
TNFSF4-201ENST00000281834 AMMECR1LQ6DCA0 310 aa4.44□□□□□ -1.7
TNFSF4-201ENST00000281834 SCGB1D4Q6XE38 83 aa4.44□□□□□ -1.7
TNFSF4-201ENST00000281834 BAALCQ8WXS3 180 aa4.44□□□□□ -1.7
TNFSF4-201ENST00000281834 C20orf78Q9BR46 151 aa4.44□□□□□ -1.7
TNFSF4-201ENST00000281834 COX11Q9Y6N1 276 aa4.44□□□□□ -1.7
TNFSF4-201ENST00000281834 KIF25-AS1Q9Y6Z4 181 aa4.44□□□□□ -1.7
TNFSF4-201ENST00000281834 A0A087WX48 190 aa4.44□□□□□ -1.7
TNFSF4-201ENST00000281834 H3BUT2 72 aa4.44□□□□□ -1.7
TNFSF4-201ENST00000281834 VCYO14598 125 aa4.44□□□□□ -1.7
TNFSF4-201ENST00000281834 KRTAP1-1Q07627 177 aa4.44□□□□□ -1.7
TNFSF4-201ENST00000281834 MAPKAPK5-AS1Q8N8E1 139 aa4.44□□□□□ -1.7
TNFSF4-201ENST00000281834 OR11H2Q8NH07 326 aa4.44□□□□□ -1.7
TNFSF4-201ENST00000281834 INAFM1C9JVW0 142 aa4.43□□□□□ -1.7
TNFSF4-201ENST00000281834 F8VRH5 84 aa4.43□□□□□ -1.7
TNFSF4-201ENST00000281834 H7C1H1 209 aa4.43□□□□□ -1.7
TNFSF4-201ENST00000281834 CCL25O15444 150 aa4.43□□□□□ -1.7
TNFSF4-201ENST00000281834 PF4P02776 101 aa4.43□□□□□ -1.7
TNFSF4-201ENST00000281834 BOD1L2Q8IYS8 172 aa4.43□□□□□ -1.7
TNFSF4-201ENST00000281834 NHP2Q9NX24 153 aaKnown RBP4.43□□□□□ -1.7
TNFSF4-201ENST00000281834 TNFRSF18Q9Y5U5 241 aa4.43□□□□□ -1.7
TNFSF4-201ENST00000281834 STAB1Q9NY15 2570 aa4.43□□□□□ -1.7
TNFSF4-201ENST00000281834 TRBV25-1A0A075B6N4 114 aa4.43□□□□□ -1.7
TNFSF4-201ENST00000281834 TRBV7-9A0A0J9YWB2 115 aa4.43□□□□□ -1.7
TNFSF4-201ENST00000281834 M0QY20 66 aa4.43□□□□□ -1.7
TNFSF4-201ENST00000281834 TAX1BP3O14907 124 aa4.43□□□□□ -1.7
TNFSF4-201ENST00000281834 Q8N2B8 174 aa4.43□□□□□ -1.7
TNFSF4-201ENST00000281834 RNF152Q8N8N0 203 aa4.43□□□□□ -1.7
TNFSF4-201ENST00000281834 TOMM6Q96B49 74 aa4.43□□□□□ -1.7
TNFSF4-201ENST00000281834 C9orf85Q96MD7 179 aa4.43□□□□□ -1.7
TNFSF4-201ENST00000281834 HIST1H4GQ99525 98 aa4.43□□□□□ -1.7
TNFSF4-201ENST00000281834 CHAC1Q9BUX1 264 aa4.43□□□□□ -1.7
TNFSF4-201ENST00000281834 INSP01308 110 aa4.42□□□□□ -1.7
TNFSF4-201ENST00000281834 FXYD2P54710 66 aa4.42□□□□□ -1.7
TNFSF4-201ENST00000281834 Q6ZSN1 163 aa4.42□□□□□ -1.7
TNFSF4-201ENST00000281834 ORAOV1Q8WV07 137 aa4.42□□□□□ -1.7
TNFSF4-201ENST00000281834 TSSC4Q9Y5U2 329 aaPredicted RBP4.42□□□□□ -1.7
TNFSF4-201ENST00000281834 TRRAPQ9Y4A5 3859 aa4.42□□□□□ -1.7
TNFSF4-201ENST00000281834 ANK3Q12955 4377 aaKnown RBP4.42□□□□□ -1.7
TNFSF4-201ENST00000281834 C11orf86A6NJI1 115 aa4.42□□□□□ -1.7
TNFSF4-201ENST00000281834 PPP1R17O96001 155 aa4.42□□□□□ -1.7
TNFSF4-201ENST00000281834 MED14OSP0DP75 135 aa4.42□□□□□ -1.7
TNFSF4-201ENST00000281834 MORN3Q6PF18 240 aaPredicted RBP4.42□□□□□ -1.7
TNFSF4-201ENST00000281834 RNASE8Q8TDE3 154 aaKnown RBP4.42□□□□□ -1.7
TNFSF4-201ENST00000281834 PRADC1Q9BSG0 188 aa4.42□□□□□ -1.7
TNFSF4-201ENST00000281834 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.42□□□□□ -1.7
TNFSF4-201ENST00000281834 IGKV2-29A2NJV5 120 aaPredicted RBP4.42□□□□□ -1.7
TNFSF4-201ENST00000281834 LY6G6DO95868 133 aa4.42□□□□□ -1.7
TNFSF4-201ENST00000281834 POLR2KP53803 58 aaKnown RBP4.42□□□□□ -1.7
TNFSF4-201ENST00000281834 RPL24P83731 157 aaKnown RBP4.42□□□□□ -1.7
TNFSF4-201ENST00000281834 ZNF415Q09FC8 603 aa4.42□□□□□ -1.7
TNFSF4-201ENST00000281834 NOTCH1P46531 2555 aa4.41□□□□□ -1.7
TNFSF4-201ENST00000281834 ZNF815PA8K554 130 aa4.41□□□□□ -1.7
TNFSF4-201ENST00000281834 ADARB2-AS1A8MUL3 147 aa4.41□□□□□ -1.7
TNFSF4-201ENST00000281834 PLNP26678 52 aa4.41□□□□□ -1.7
TNFSF4-201ENST00000281834 SRSF9Q13242 221 aaKnown RBP eCLIP4.41□□□□□ -1.7
TNFSF4-201ENST00000281834 TRPT1Q86TN4 253 aaKnown RBP4.41□□□□□ -1.7
TNFSF4-201ENST00000281834 MRPL52Q86TS9 123 aaKnown RBP4.41□□□□□ -1.7
TNFSF4-201ENST00000281834 DEFB125Q8N687 156 aa4.41□□□□□ -1.7
TNFSF4-201ENST00000281834 M0R2P5 195 aa4.41□□□□□ -1.7
TNFSF4-201ENST00000281834 TSHBP01222 138 aa4.41□□□□□ -1.7
TNFSF4-201ENST00000281834 HSD52Q0P140 79 aa4.41□□□□□ -1.7
TNFSF4-201ENST00000281834 Q6ZTI0 123 aa4.41□□□□□ -1.7
TNFSF4-201ENST00000281834 TEX29Q8N6K0 151 aa4.41□□□□□ -1.7
TNFSF4-201ENST00000281834 NEXN-AS1Q8NBZ9 246 aa4.41□□□□□ -1.7
TNFSF4-201ENST00000281834 NOP10Q9NPE3 64 aaKnown RBP4.41□□□□□ -1.7
TNFSF4-201ENST00000281834 A6NDN8 102 aa4.41□□□□□ -1.7
TNFSF4-201ENST00000281834 NXPH4O95158 308 aa4.41□□□□□ -1.7
TNFSF4-201ENST00000281834 TMEM86BQ8N661 226 aa4.41□□□□□ -1.7
TNFSF4-201ENST00000281834 ODF3Q96PU9 254 aa4.41□□□□□ -1.7
TNFSF4-201ENST00000281834 TRGV2A0A075B6R0 118 aa4.4□□□□□ -1.7
TNFSF4-201ENST00000281834 IGKV3OR2-268A0A0C4DH90 116 aa4.4□□□□□ -1.7
TNFSF4-201ENST00000281834 ZNRF2Q8NHG8 242 aa4.4□□□□□ -1.7
TNFSF4-201ENST00000281834 A0A0J9YXV3 536 aa4.4□□□□□ -1.71
TNFSF4-201ENST00000281834 GAGE12BA1L429 117 aa4.4□□□□□ -1.71
TNFSF4-201ENST00000281834 I3L3M4 83 aa4.4□□□□□ -1.71
TNFSF4-201ENST00000281834 GAGE7O76087 117 aa4.4□□□□□ -1.71
TNFSF4-201ENST00000281834 RNASE1P07998 156 aaKnown RBP4.4□□□□□ -1.71
TNFSF4-201ENST00000281834 GAGE12FP0CL80 117 aa4.4□□□□□ -1.71
TNFSF4-201ENST00000281834 GAGE12GP0CL81 117 aa4.4□□□□□ -1.71
TNFSF4-201ENST00000281834 GAGE12IP0CL82 117 aa4.4□□□□□ -1.71
TNFSF4-201ENST00000281834 DGAT2L7PQ6IED9 249 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms