RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 FA2HQ7L5A8 372 aa9.51□□□□□ -0.89
SGCA-201ENST00000262018 TMEM70Q9BUB7 260 aa9.51□□□□□ -0.89
SGCA-201ENST00000262018 K7EMI3 77 aa9.5□□□□□ -0.89
SGCA-201ENST00000262018 M0R381 172 aa9.5□□□□□ -0.89
SGCA-201ENST00000262018 LEPROTL1O95214 131 aa9.5□□□□□ -0.89
SGCA-201ENST00000262018 KRTDAPP60985 99 aa9.5□□□□□ -0.89
SGCA-201ENST00000262018 NUTF2P61970 127 aaKnown RBP9.5□□□□□ -0.89
SGCA-201ENST00000262018 ZNF664Q8N3J9 261 aa9.5□□□□□ -0.89
SGCA-201ENST00000262018 PRSS3P2Q8NHM4 247 aa9.5□□□□□ -0.89
SGCA-201ENST00000262018 URB1-AS1Q96HZ7 61 aa9.5□□□□□ -0.89
SGCA-201ENST00000262018 PRELID3AQ96N28 172 aa9.5□□□□□ -0.89
SGCA-201ENST00000262018 NDUFAF3Q9BU61 184 aa9.5□□□□□ -0.89
SGCA-201ENST00000262018 NXT2Q9NPJ8 142 aaKnown RBP9.5□□□□□ -0.89
SGCA-201ENST00000262018 MDFICQ9P1T7 246 aa9.5□□□□□ -0.89
SGCA-201ENST00000262018 LINC00587B1AMM8 73 aa9.49□□□□□ -0.89
SGCA-201ENST00000262018 CKS2P33552 79 aa9.49□□□□□ -0.89
SGCA-201ENST00000262018 MORN3Q6PF18 240 aaPredicted RBP9.49□□□□□ -0.89
SGCA-201ENST00000262018 SPATA12Q7Z6I5 190 aa9.49□□□□□ -0.89
SGCA-201ENST00000262018 MAP1LC3CQ9BXW4 147 aa9.49□□□□□ -0.89
SGCA-201ENST00000262018 CSTL1Q9H114 145 aa9.49□□□□□ -0.89
SGCA-201ENST00000262018 DMBT1Q9UGM3 2413 aaPredicted RBP9.49□□□□□ -0.89
SGCA-201ENST00000262018 LINC01546A6NGU7 62 aa9.48□□□□□ -0.89
SGCA-201ENST00000262018 CBY3A6NI87 242 aa9.48□□□□□ -0.89
SGCA-201ENST00000262018 PRSS47A8MTI9 375 aa9.48□□□□□ -0.89
SGCA-201ENST00000262018 CDK2AP2O75956 126 aa9.48□□□□□ -0.89
SGCA-201ENST00000262018 C3orf79P0CE67 100 aa9.48□□□□□ -0.89
SGCA-201ENST00000262018 PET117Q6UWS5 81 aa9.48□□□□□ -0.89
SGCA-201ENST00000262018 MRAP2Q96G30 205 aa9.48□□□□□ -0.89
SGCA-201ENST00000262018 AP1S3Q96PC3 154 aa9.48□□□□□ -0.89
SGCA-201ENST00000262018 MAP1LC3AQ9H492 121 aa9.48□□□□□ -0.89
SGCA-201ENST00000262018 DPH3P1Q9H4G8 78 aa9.48□□□□□ -0.89
SGCA-201ENST00000262018 LINC01549A6NIU2 74 aa9.48□□□□□ -0.89
SGCA-201ENST00000262018 SMKR1H3BMG3 65 aa9.48□□□□□ -0.89
SGCA-201ENST00000262018 Q8N1X5 172 aa9.48□□□□□ -0.89
SGCA-201ENST00000262018 POM121L12Q8N7R1 296 aa9.48□□□□□ -0.89
SGCA-201ENST00000262018 SYT8Q8NBV8 401 aa9.48□□□□□ -0.89
SGCA-201ENST00000262018 LINC01587Q99440 93 aa9.48□□□□□ -0.89
SGCA-201ENST00000262018 XCL2Q9UBD3 114 aa9.48□□□□□ -0.89
SGCA-201ENST00000262018 IGHV1-24A0A0C4DH33 117 aa9.47□□□□□ -0.89
SGCA-201ENST00000262018 NCR2O95944 276 aa9.47□□□□□ -0.89
SGCA-201ENST00000262018 NPYP01303 97 aa9.47□□□□□ -0.89
SGCA-201ENST00000262018 GIG44P09565 113 aaPredicted RBP9.47□□□□□ -0.89
SGCA-201ENST00000262018 C1orf158Q8N1D5 194 aa9.47□□□□□ -0.89
SGCA-201ENST00000262018 C14orf178Q8N769 122 aaPredicted RBP9.47□□□□□ -0.89
SGCA-201ENST00000262018 PTH2Q96A98 100 aa9.47□□□□□ -0.89
SGCA-201ENST00000262018 C1QTNF4Q9BXJ3 329 aa9.47□□□□□ -0.89
SGCA-201ENST00000262018 KIF25-AS1Q9Y6Z4 181 aa9.47□□□□□ -0.89
SGCA-201ENST00000262018 DEFB4AO15263 64 aa9.46□□□□□ -0.9
SGCA-201ENST00000262018 ZNF415Q09FC8 603 aa9.46□□□□□ -0.9
SGCA-201ENST00000262018 CDPF1Q6NVV7 123 aa9.46□□□□□ -0.9
SGCA-201ENST00000262018 MIEN1Q9BRT3 115 aa9.46□□□□□ -0.9
SGCA-201ENST00000262018 C11orf68Q9H3H3 251 aaKnown RBP9.46□□□□□ -0.9
SGCA-201ENST00000262018 C16orf90A8MZG2 172 aa9.45□□□□□ -0.9
SGCA-201ENST00000262018 GAS8-AS1O95177 125 aa9.45□□□□□ -0.9
SGCA-201ENST00000262018 TNFRSF6BO95407 300 aa9.45□□□□□ -0.9
SGCA-201ENST00000262018 G0S2P27469 103 aa9.45□□□□□ -0.9
SGCA-201ENST00000262018 LINC00315P59091 139 aa9.45□□□□□ -0.9
SGCA-201ENST00000262018 PIK3CD-AS1Q5SR53 167 aa9.45□□□□□ -0.9
SGCA-201ENST00000262018 FAM19A2Q8N3H0 131 aa9.45□□□□□ -0.9
SGCA-201ENST00000262018 NRACQ8N912 160 aa9.45□□□□□ -0.9
SGCA-201ENST00000262018 TRAV9-2A0A087WT02 112 aa9.44□□□□□ -0.9
SGCA-201ENST00000262018 HSBP1L1C9JCN9 74 aa9.44□□□□□ -0.9
SGCA-201ENST00000262018 SYS1-DBNDD2H3BUS1 97 aa9.44□□□□□ -0.9
SGCA-201ENST00000262018 HBDP02042 147 aa9.44□□□□□ -0.9
SGCA-201ENST00000262018 GATA1P15976 413 aaPredicted RBP9.44□□□□□ -0.9
SGCA-201ENST00000262018 C11orf72Q8NBR9 251 aa9.44□□□□□ -0.9
SGCA-201ENST00000262018 OR11H2Q8NH07 326 aa9.44□□□□□ -0.9
SGCA-201ENST00000262018 SPXQ9BT56 116 aa9.44□□□□□ -0.9
SGCA-201ENST00000262018 LOC389332A0A1B0GUA5 103 aa9.43□□□□□ -0.9
SGCA-201ENST00000262018 M0R2P5 195 aa9.43□□□□□ -0.9
SGCA-201ENST00000262018 SMIM17P0DL12 118 aa9.43□□□□□ -0.9
SGCA-201ENST00000262018 HTN1P15515 57 aa9.43□□□□□ -0.9
SGCA-201ENST00000262018 IFI27P40305 119 aaPredicted RBP9.43□□□□□ -0.9
SGCA-201ENST00000262018 LGALS9BQ3B8N2 356 aa9.43□□□□□ -0.9
SGCA-201ENST00000262018 Q8N976 141 aa9.43□□□□□ -0.9
SGCA-201ENST00000262018 CSNK1G2-AS1Q8NCQ2 148 aa9.43□□□□□ -0.9
SGCA-201ENST00000262018 TMEM208Q9BTX3 173 aa9.43□□□□□ -0.9
SGCA-201ENST00000262018 JPT2Q9H910 190 aa9.43□□□□□ -0.9
SGCA-201ENST00000262018 UQCR10Q9UDW1 63 aa9.43□□□□□ -0.9
SGCA-201ENST00000262018 GOLT1BQ9Y3E0 138 aa9.43□□□□□ -0.9
SGCA-201ENST00000262018 TRAV26-2A0A0B4J265 109 aa9.42□□□□□ -0.9
SGCA-201ENST00000262018 PRM2P04554 102 aa9.42□□□□□ -0.9
SGCA-201ENST00000262018 MGPP08493 103 aa9.42□□□□□ -0.9
SGCA-201ENST00000262018 ZNF876PQ49A33 203 aa9.42□□□□□ -0.9
SGCA-201ENST00000262018 C14orf144Q96I85 54 aa9.42□□□□□ -0.9
SGCA-201ENST00000262018 C20orf78Q9BR46 151 aa9.42□□□□□ -0.9
SGCA-201ENST00000262018 ST20Q9HBF5 79 aa9.42□□□□□ -0.9
SGCA-201ENST00000262018 CRYGDP07320 174 aa9.41□□□□□ -0.9
SGCA-201ENST00000262018 AZU1P20160 251 aa9.41□□□□□ -0.9
SGCA-201ENST00000262018 RASL10AQ92737 203 aa9.41□□□□□ -0.9
SGCA-201ENST00000262018 PRO1933Q9H354 126 aa9.41□□□□□ -0.9
SGCA-201ENST00000262018 IGLV2-18A0A075B6J9 118 aa9.4□□□□□ -0.9
SGCA-201ENST00000262018 P0DMU3 169 aa9.4□□□□□ -0.9
SGCA-201ENST00000262018 FAM231AP0DMU4 169 aa9.4□□□□□ -0.9
SGCA-201ENST00000262018 FAM231CP0DMU5 169 aa9.4□□□□□ -0.9
SGCA-201ENST00000262018 RPL32P62910 135 aaKnown RBP9.4□□□□□ -0.9
SGCA-201ENST00000262018 SPATA45Q537H7 98 aa9.4□□□□□ -0.9
SGCA-201ENST00000262018 LINC01545Q5VT33 79 aa9.4□□□□□ -0.9
SGCA-201ENST00000262018 ZNF705AQ6ZN79 300 aaPredicted RBP9.4□□□□□ -0.9
SGCA-201ENST00000262018 Q8N8P6 123 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms