RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 COL4A4P53420 1690 aaPredicted RBP9.29□□□□□ -0.92
SPG11-201ENST00000261866 C11orf52Q96A22 123 aa9.28□□□□□ -0.92
SPG11-201ENST00000261866 TNRC6AQ8NDV7 1962 aaKnown RBP9.28□□□□□ -0.92
SPG11-201ENST00000261866 NREPQ16612 68 aa9.28□□□□□ -0.92
SPG11-201ENST00000261866 SPTSSBQ8NFR3 76 aa9.28□□□□□ -0.92
SPG11-201ENST00000261866 PPDPFLQ8WWR9 84 aa9.28□□□□□ -0.92
SPG11-201ENST00000261866 MLST8Q9BVC4 326 aa9.28□□□□□ -0.92
SPG11-201ENST00000261866 SH2D6Q7Z4S9 175 aa9.28□□□□□ -0.92
SPG11-201ENST00000261866 Q8NFD4 153 aa9.28□□□□□ -0.92
SPG11-201ENST00000261866 CCDC140Q96MF4 163 aa9.28□□□□□ -0.92
SPG11-201ENST00000261866 SND1-IT1Q9HBX3 110 aa9.28□□□□□ -0.92
SPG11-201ENST00000261866 TMEM131Q92545 1883 aa9.28□□□□□ -0.92
SPG11-201ENST00000261866 IGKV2D-26A0A0A0MRZ7 120 aa9.28□□□□□ -0.92
SPG11-201ENST00000261866 LOXL1Q08397 574 aaPredicted RBP9.27□□□□□ -0.92
SPG11-201ENST00000261866 BDP1A6H8Y1 2624 aa9.27□□□□□ -0.92
SPG11-201ENST00000261866 IGHV4-30-4P0DP06 118 aa9.27□□□□□ -0.93
SPG11-201ENST00000261866 TTTY13Q9BZ97 58 aa9.27□□□□□ -0.93
SPG11-201ENST00000261866 A0A1B0GX51 115 aa9.27□□□□□ -0.93
SPG11-201ENST00000261866 A0A1W2PPM0 123 aa9.27□□□□□ -0.93
SPG11-201ENST00000261866 PLA2G2EQ9NZK7 142 aa9.27□□□□□ -0.93
SPG11-201ENST00000261866 C12orf74Q32Q52 190 aa9.27□□□□□ -0.93
SPG11-201ENST00000261866 Q6ZTI0 123 aa9.27□□□□□ -0.93
SPG11-201ENST00000261866 C18orf65Q6ZTR6 163 aa9.27□□□□□ -0.93
SPG11-201ENST00000261866 MUSTN1Q8IVN3 82 aa9.27□□□□□ -0.93
SPG11-201ENST00000261866 HIGD2AQ9BW72 106 aa9.27□□□□□ -0.93
SPG11-201ENST00000261866 Q6YL49 198 aa9.26□□□□□ -0.93
SPG11-201ENST00000261866 KIAA1549Q9HCM3 1950 aa9.26□□□□□ -0.93
SPG11-201ENST00000261866 CASC2Q6XLA1 102 aa9.26□□□□□ -0.93
SPG11-201ENST00000261866 NDUFA11Q86Y39 141 aa9.26□□□□□ -0.93
SPG11-201ENST00000261866 B5MCH6 92 aa9.26□□□□□ -0.93
SPG11-201ENST00000261866 C1orf229Q6ZS94 237 aaPredicted RBP9.26□□□□□ -0.93
SPG11-201ENST00000261866 CLEC2BQ92478 149 aa9.26□□□□□ -0.93
SPG11-201ENST00000261866 ZNF747Q9BV97 191 aa9.26□□□□□ -0.93
SPG11-201ENST00000261866 CDPF1Q6NVV7 123 aa9.26□□□□□ -0.93
SPG11-201ENST00000261866 FREM1Q5H8C1 2179 aa9.25□□□□□ -0.93
SPG11-201ENST00000261866 SCXQ7RTU7 201 aa9.25□□□□□ -0.93
SPG11-201ENST00000261866 SPANXA1Q9NS26 97 aa9.25□□□□□ -0.93
SPG11-201ENST00000261866 K7EP13 123 aa9.25□□□□□ -0.93
SPG11-201ENST00000261866 NDUFA1O15239 70 aa9.25□□□□□ -0.93
SPG11-201ENST00000261866 FRMD6-AS1P0C7T7 363 aa9.25□□□□□ -0.93
SPG11-201ENST00000261866 FAM222AQ5U5X8 452 aa9.25□□□□□ -0.93
SPG11-201ENST00000261866 LYPD6Q86Y78 171 aa9.25□□□□□ -0.93
SPG11-201ENST00000261866 IGF1P05019 195 aa9.24□□□□□ -0.93
SPG11-201ENST00000261866 SPAG11BQ08648 103 aa9.24□□□□□ -0.93
SPG11-201ENST00000261866 NUPR1O60356 82 aa9.24□□□□□ -0.93
SPG11-201ENST00000261866 FAM167A-AS1Q96KT0 104 aa9.24□□□□□ -0.93
SPG11-201ENST00000261866 WFDC10AQ9H1F0 79 aa9.24□□□□□ -0.93
SPG11-201ENST00000261866 LINC00269Q8N2A0 174 aa9.24□□□□□ -0.93
SPG11-201ENST00000261866 A0A087WZ39 114 aa9.24□□□□□ -0.93
SPG11-201ENST00000261866 PRSS47A8MTI9 375 aa9.24□□□□□ -0.93
SPG11-201ENST00000261866 TNFRSF13BO14836 293 aaPredicted RBP9.23□□□□□ -0.93
SPG11-201ENST00000261866 RNF152Q8N8N0 203 aa9.23□□□□□ -0.93
SPG11-201ENST00000261866 LENEPQ9Y5L5 61 aa9.23□□□□□ -0.93
SPG11-201ENST00000261866 IL15RAQ13261 267 aa9.23□□□□□ -0.93
SPG11-201ENST00000261866 TMEM263Q8WUH6 116 aaKnown RBP9.23□□□□□ -0.93
SPG11-201ENST00000261866 CDSNQ15517 529 aa9.23□□□□□ -0.93
SPG11-201ENST00000261866 SPINK6Q6UWN8 80 aa9.23□□□□□ -0.93
SPG11-201ENST00000261866 A0A0J9YX75 114 aa9.22□□□□□ -0.93
SPG11-201ENST00000261866 K7EMT4 169 aa9.22□□□□□ -0.93
SPG11-201ENST00000261866 OBSL1O75147 1896 aa9.22□□□□□ -0.93
SPG11-201ENST00000261866 F8W1H4 67 aa9.22□□□□□ -0.93
SPG11-201ENST00000261866 CFC1BP0CG36 223 aa9.22□□□□□ -0.93
SPG11-201ENST00000261866 CFC1P0CG37 223 aa9.22□□□□□ -0.93
SPG11-201ENST00000261866 DEFB131BA0A096LNP1 70 aa9.22□□□□□ -0.93
SPG11-201ENST00000261866 FBXL19-AS1Q494R0 122 aa9.22□□□□□ -0.93
SPG11-201ENST00000261866 Q6ZSV7 163 aa9.22□□□□□ -0.93
SPG11-201ENST00000261866 C20orf173Q96LM9 149 aa9.22□□□□□ -0.93
SPG11-201ENST00000261866 MP68P56378 58 aa9.22□□□□□ -0.93
SPG11-201ENST00000261866 MUC4Q99102 2169 aa9.22□□□□□ -0.93
SPG11-201ENST00000261866 PSMB8P28062 276 aa9.22□□□□□ -0.93
SPG11-201ENST00000261866 PRO3102Q9H379 93 aa9.22□□□□□ -0.93
SPG11-201ENST00000261866 KIAA1549LQ6ZVL6 1849 aa9.21□□□□□ -0.93
SPG11-201ENST00000261866 WFDC10BQ8IUB3 73 aa9.21□□□□□ -0.93
SPG11-201ENST00000261866 OTOGLQ3ZCN5 2332 aa9.21□□□□□ -0.93
SPG11-201ENST00000261866 K7EP34 96 aa9.21□□□□□ -0.93
SPG11-201ENST00000261866 CREBBPQ92793 2442 aa9.21□□□□□ -0.93
SPG11-201ENST00000261866 PRM2P04554 102 aa9.21□□□□□ -0.93
SPG11-201ENST00000261866 IGKV1D-37A0A075B6S9 117 aa9.21□□□□□ -0.94
SPG11-201ENST00000261866 CRYGDP07320 174 aa9.21□□□□□ -0.94
SPG11-201ENST00000261866 HERV-K104P63124 156 aa9.21□□□□□ -0.94
SPG11-201ENST00000261866 PPDPFQ9H3Y8 114 aa9.21□□□□□ -0.94
SPG11-201ENST00000261866 ZNF80P51504 273 aaPredicted RBP9.2□□□□□ -0.94
SPG11-201ENST00000261866 ODF3BA8MYP8 253 aa9.2□□□□□ -0.94
SPG11-201ENST00000261866 GDF5OSQ5U4N7 250 aa9.2□□□□□ -0.94
SPG11-201ENST00000261866 C20orf144Q9BQM9 153 aa9.2□□□□□ -0.94
SPG11-201ENST00000261866 LTBP2Q14767 1821 aa9.2□□□□□ -0.94
SPG11-201ENST00000261866 Q6ZUT4 128 aa9.2□□□□□ -0.94
SPG11-201ENST00000261866 PRO0255Q9UI72 69 aa9.2□□□□□ -0.94
SPG11-201ENST00000261866 LRRC75A-AS1Q8N1F1 130 aa9.2□□□□□ -0.94
SPG11-201ENST00000261866 PLA2G2AP14555 144 aa9.19□□□□□ -0.94
SPG11-201ENST00000261866 Q6ZS46 218 aa9.19□□□□□ -0.94
SPG11-201ENST00000261866 BRK1Q8WUW1 75 aa9.19□□□□□ -0.94
SPG11-201ENST00000261866 FAM19A5Q7Z5A7 132 aaPredicted RBP9.19□□□□□ -0.94
SPG11-201ENST00000261866 B9D2Q9BPU9 175 aa9.19□□□□□ -0.94
SPG11-201ENST00000261866 A4D1N5 150 aa9.19□□□□□ -0.94
SPG11-201ENST00000261866 LY6G6CO95867 125 aa9.19□□□□□ -0.94
SPG11-201ENST00000261866 DCANP1Q8TF63 244 aa9.19□□□□□ -0.94
SPG11-201ENST00000261866 PROK1P58294 105 aa9.19□□□□□ -0.94
SPG11-201ENST00000261866 HILS1P60008 231 aa9.19□□□□□ -0.94
SPG11-201ENST00000261866 MIR7-3HGQ8N6C7 128 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms