RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 SFRP2Q96HF1 295 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 SLC25A2Q9BXI2 301 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 BIN3Q9NQY0 253 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 PRR34Q9NV39 138 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 MYCBP2O75592 4640 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 TRBV6-8A0A0A6YYG3 113 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 TRAV1-1A0A0B4J248 108 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 IGHV1-24A0A0C4DH33 117 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 A0A1B0GUV1 79 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 PRM2P04554 102 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 SMIM17P0DL12 118 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 SULT1A2P50226 295 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 COTL1Q14019 142 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 IQCJQ1A5X6 159 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 GTF2H5Q6ZYL4 71 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 COMMD7Q86VX2 200 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 EXOC3-AS1Q8N2X6 119 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 CHCHD5Q9BSY4 110 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 WDR61Q9GZS3 305 aaKnown RBP1.48□□□□□ -2.17
PRKD3-201ENST00000234179 PSG8Q9UQ74 426 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 H0Y8G0 127 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 NCR2O95944 276 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 MT1HL1P0DM35 61 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 RANP62826 216 aaKnown RBP1.47□□□□□ -2.17
PRKD3-201ENST00000234179 SERF2P84101 59 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 FAAP20Q6NZ36 180 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 SDIM1Q6ZPB5 146 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 DIRC1Q969H9 104 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 ZNF471Q9BX82 626 aaPredicted RBP1.47□□□□□ -2.17
PRKD3-201ENST00000234179 NDUFA13Q9P0J0 144 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 PHLDA3Q9Y5J5 127 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 TNFRSF18Q9Y5U5 241 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 TMEM262E9PQX1 116 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 GCGP01275 180 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 TCRAP04437 139 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 PYYP10082 97 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 SCGB1A1P11684 91 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 RAB5AP20339 215 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 FHITP49789 147 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 EIF5AP63241 154 aaKnown RBP1.47□□□□□ -2.17
PRKD3-201ENST00000234179 GOLT1AQ6ZVE7 132 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 SMIM12Q96EX1 92 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 PHYHIPLQ96FC7 376 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 CARHSP1Q9Y2V2 147 aaKnown RBP1.47□□□□□ -2.17
PRKD3-201ENST00000234179 XKRY2A2RUG3 117 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 FAM24AA6NFZ4 105 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 NDUFS6O75380 124 aaKnown RBP1.47□□□□□ -2.17
PRKD3-201ENST00000234179 CCNKO75909 580 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 CST7O76096 145 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 ANGP03950 147 aaKnown RBP1.47□□□□□ -2.17
PRKD3-201ENST00000234179 OR5AL1P0C617 328 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 VPREB1P12018 145 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 PSMB2P49721 201 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 PRR9Q5T870 116 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 MIR17HGQ75NE6 70 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 RAB37Q96AX2 223 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 ANAPC13Q9BS18 74 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 C11orf1Q9H5F2 150 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 H3BTX0 84 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 CXorf1O96002 111 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 CACNG7P62955 275 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 FER1L6-AS1Q8NA97 138 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 NUDT10Q8NFP7 164 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 SUN5Q8TC36 379 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 SPACA4Q8TDM5 124 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 DAZAP1Q96EP5 407 aaKnown RBP1.47□□□□□ -2.17
PRKD3-201ENST00000234179 NUDT11Q96G61 164 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 PGLYRP4Q96LB8 373 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 ACTR3CQ9C0K3 210 aaPredicted RBP1.47□□□□□ -2.17
PRKD3-201ENST00000234179 G0S2P27469 103 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 RPS10P46783 165 aaKnown RBP1.47□□□□□ -2.17
PRKD3-201ENST00000234179 CDC34P49427 236 aaPredicted RBP1.47□□□□□ -2.17
PRKD3-201ENST00000234179 KRTAP10-8P60410 259 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 PEA15Q15121 130 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 PRR27Q6MZM9 219 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 TEX261Q6UWH6 196 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 FMC1Q96HJ9 113 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 HSPB11Q9Y547 144 aa1.47□□□□□ -2.17
PRKD3-201ENST00000234179 IGHV1-58A0A0C4DH39 117 aa1.46□□□□□ -2.18
PRKD3-201ENST00000234179 hDV102S1A0JD36 115 aa1.46□□□□□ -2.18
PRKD3-201ENST00000234179 PGPEP1LA6NFU8 196 aa1.46□□□□□ -2.18
PRKD3-201ENST00000234179 ZNF727A8MUV8 499 aa1.46□□□□□ -2.18
PRKD3-201ENST00000234179 FAM25EA8MYX2 175 aa1.46□□□□□ -2.18
PRKD3-201ENST00000234179 B4DEV8 164 aa1.46□□□□□ -2.18
PRKD3-201ENST00000234179 PANO1I0J062 215 aa1.46□□□□□ -2.18
PRKD3-201ENST00000234179 TRGC1P0CF51 173 aa1.46□□□□□ -2.18
PRKD3-201ENST00000234179 ZNF25P17030 456 aaPredicted RBP1.46□□□□□ -2.18
PRKD3-201ENST00000234179 PRR3P79522 188 aaKnown RBP1.46□□□□□ -2.18
PRKD3-201ENST00000234179 FAM162BQ5T6X4 162 aa1.46□□□□□ -2.18
PRKD3-201ENST00000234179 EIF5AL1Q6IS14 154 aaKnown RBP1.46□□□□□ -2.18
PRKD3-201ENST00000234179 AQP10Q96PS8 301 aa1.46□□□□□ -2.18
PRKD3-201ENST00000234179 SEC22CQ9BRL7 303 aa1.46□□□□□ -2.18
PRKD3-201ENST00000234179 TMEM243Q9BU79 118 aa1.46□□□□□ -2.18
PRKD3-201ENST00000234179 SAMD10Q9BYL1 202 aa1.46□□□□□ -2.18
PRKD3-201ENST00000234179 EPDR1Q9UM22 224 aa1.46□□□□□ -2.18
PRKD3-201ENST00000234179 IGSF23A1L1A6 192 aa1.46□□□□□ -2.18
PRKD3-201ENST00000234179 K7ERU9 68 aa1.46□□□□□ -2.18
PRKD3-201ENST00000234179 UBE2L6O14933 153 aa1.46□□□□□ -2.18
PRKD3-201ENST00000234179 PTTG1O95997 202 aa1.46□□□□□ -2.18
PRKD3-201ENST00000234179 HLA-DQA1P01909 254 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms