RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 TRAV41A0A0B4J266 112 aa10.76□□□□□ -0.69
SFXN3-201ENST00000224807 NDUFV3P56181 108 aaKnown RBP10.76□□□□□ -0.69
SFXN3-201ENST00000224807 FOXC1Q12948 553 aa10.76□□□□□ -0.69
SFXN3-201ENST00000224807 EIF4EBP3O60516 100 aaPredicted RBP10.75□□□□□ -0.69
SFXN3-201ENST00000224807 SPINK13Q1W4C9 94 aa10.75□□□□□ -0.69
SFXN3-201ENST00000224807 ATP6V0E2Q8NHE4 81 aa10.75□□□□□ -0.69
SFXN3-201ENST00000224807 SVIPQ8NHG7 77 aa10.75□□□□□ -0.69
SFXN3-201ENST00000224807 IGHV3-33P01772 117 aa10.75□□□□□ -0.69
SFXN3-201ENST00000224807 C9orf139Q6ZV77 190 aa10.75□□□□□ -0.69
SFXN3-201ENST00000224807 CHCHD5Q9BSY4 110 aa10.75□□□□□ -0.69
SFXN3-201ENST00000224807 VCX2Q9H322 139 aa10.75□□□□□ -0.69
SFXN3-201ENST00000224807 IGHV3-38A0A0C4DH36 116 aa10.74□□□□□ -0.69
SFXN3-201ENST00000224807 VCYO14598 125 aa10.74□□□□□ -0.69
SFXN3-201ENST00000224807 LINC01620Q4KN68 170 aa10.74□□□□□ -0.69
SFXN3-201ENST00000224807 SHISA2Q6UWI4 295 aa10.74□□□□□ -0.69
SFXN3-201ENST00000224807 BPESC1Q9GZL8 116 aa10.74□□□□□ -0.69
SFXN3-201ENST00000224807 ITPR1Q14643 2758 aa10.74□□□□□ -0.69
SFXN3-201ENST00000224807 NHLRC4P0CG21 123 aaPredicted RBP10.74□□□□□ -0.69
SFXN3-201ENST00000224807 PROK1P58294 105 aa10.74□□□□□ -0.69
SFXN3-201ENST00000224807 GAGE12JA6NER3 117 aa10.73□□□□□ -0.69
SFXN3-201ENST00000224807 TMEM262E9PQX1 116 aa10.73□□□□□ -0.69
SFXN3-201ENST00000224807 TRIAP1O43715 76 aa10.73□□□□□ -0.69
SFXN3-201ENST00000224807 GAGE7O76087 117 aa10.73□□□□□ -0.69
SFXN3-201ENST00000224807 GAGE12FP0CL80 117 aa10.73□□□□□ -0.69
SFXN3-201ENST00000224807 GAGE12GP0CL81 117 aa10.73□□□□□ -0.69
SFXN3-201ENST00000224807 GAGE12IP0CL82 117 aa10.73□□□□□ -0.69
SFXN3-201ENST00000224807 IFITM1P13164 125 aa10.73□□□□□ -0.69
SFXN3-201ENST00000224807 GAGE4Q13068 117 aa10.73□□□□□ -0.69
SFXN3-201ENST00000224807 CCDC168Q8NDH2 2452 aa10.73□□□□□ -0.69
SFXN3-201ENST00000224807 IGIPA6NJ69 53 aa10.73□□□□□ -0.69
SFXN3-201ENST00000224807 M0R1W7 72 aa10.73□□□□□ -0.69
SFXN3-201ENST00000224807 UBE2E1P51965 193 aa10.73□□□□□ -0.69
SFXN3-201ENST00000224807 BLCAPP62952 87 aa10.73□□□□□ -0.69
SFXN3-201ENST00000224807 HIST2H2BDQ6DRA6 164 aa10.73□□□□□ -0.69
SFXN3-201ENST00000224807 CD28P10747 220 aa10.72□□□□□ -0.69
SFXN3-201ENST00000224807 FN1P02751 2386 aaKnown RBP10.72□□□□□ -0.69
SFXN3-201ENST00000224807 Q8N6K4 173 aa10.72□□□□□ -0.69
SFXN3-201ENST00000224807 Q9UF83 564 aa10.72□□□□□ -0.69
SFXN3-201ENST00000224807 MEIG1Q5JSS6 88 aa10.71□□□□□ -0.69
SFXN3-201ENST00000224807 H3BMM0 161 aa10.71□□□□□ -0.69
SFXN3-201ENST00000224807 UBE2WQ96B02 151 aa10.71□□□□□ -0.69
SFXN3-201ENST00000224807 ATXN8Q156A1 80 aa10.71□□□□□ -0.7
SFXN3-201ENST00000224807 MINOS1Q5TGZ0 78 aa10.71□□□□□ -0.7
SFXN3-201ENST00000224807 MYO18BQ8IUG5 2567 aa10.7□□□□□ -0.7
SFXN3-201ENST00000224807 TRBV7-1A0A0A6YYK4 115 aa10.7□□□□□ -0.7
SFXN3-201ENST00000224807 CENPVL3A0A0U1RRI6 287 aa10.7□□□□□ -0.7
SFXN3-201ENST00000224807 A0A1W2PPR1 153 aa10.7□□□□□ -0.7
SFXN3-201ENST00000224807 IGHV4-4A0A075B6R2 117 aa10.69□□□□□ -0.7
SFXN3-201ENST00000224807 IGHV3-16A0A0C4DH30 117 aa10.69□□□□□ -0.7
SFXN3-201ENST00000224807 NAV2Q8IVL1 2488 aa10.69□□□□□ -0.7
SFXN3-201ENST00000224807 OVOL1O14753 267 aa10.69□□□□□ -0.7
SFXN3-201ENST00000224807 ZNF22P17026 224 aaPredicted RBP10.69□□□□□ -0.7
SFXN3-201ENST00000224807 ADAMTSL4-AS1Q5T5F5 129 aa10.69□□□□□ -0.7
SFXN3-201ENST00000224807 TMEM263Q8WUH6 116 aaKnown RBP10.69□□□□□ -0.7
SFXN3-201ENST00000224807 PAPPA-AS1Q5QFB9 102 aa10.69□□□□□ -0.7
SFXN3-201ENST00000224807 C10orf99Q6UWK7 81 aa10.69□□□□□ -0.7
SFXN3-201ENST00000224807 TIMM21Q9BVV7 248 aa10.69□□□□□ -0.7
SFXN3-201ENST00000224807 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.68□□□□□ -0.7
SFXN3-201ENST00000224807 IGKV2-29A2NJV5 120 aaPredicted RBP10.68□□□□□ -0.7
SFXN3-201ENST00000224807 A0A0J9YXY3 114 aa10.68□□□□□ -0.7
SFXN3-201ENST00000224807 NPFFO15130 113 aa10.68□□□□□ -0.7
SFXN3-201ENST00000224807 IGHV3-30-3P0DP02 117 aa10.68□□□□□ -0.7
SFXN3-201ENST00000224807 POLR2KP53803 58 aaKnown RBP10.68□□□□□ -0.7
SFXN3-201ENST00000224807 EPG5Q9HCE0 2579 aa10.67□□□□□ -0.7
SFXN3-201ENST00000224807 TRBV7-9A0A0J9YWB2 115 aa10.67□□□□□ -0.7
SFXN3-201ENST00000224807 RHODO00212 210 aa10.67□□□□□ -0.7
SFXN3-201ENST00000224807 SYNJ2BPP57105 145 aa10.67□□□□□ -0.7
SFXN3-201ENST00000224807 ITLN2Q8WWU7 325 aaPredicted RBP10.67□□□□□ -0.7
SFXN3-201ENST00000224807 UTP20O75691 2785 aaKnown RBP10.67□□□□□ -0.7
SFXN3-201ENST00000224807 M0R2P5 195 aa10.67□□□□□ -0.7
SFXN3-201ENST00000224807 LINC00315P59091 139 aa10.67□□□□□ -0.7
SFXN3-201ENST00000224807 NDUFA12Q9UI09 145 aa10.67□□□□□ -0.7
SFXN3-201ENST00000224807 MINOS1-NBL1R4GNA1 71 aa10.67□□□□□ -0.7
SFXN3-201ENST00000224807 LINC01619G3V211 115 aa10.66□□□□□ -0.7
SFXN3-201ENST00000224807 H3BUX3 64 aa10.66□□□□□ -0.7
SFXN3-201ENST00000224807 C5orf56Q8N8D9 126 aa10.66□□□□□ -0.7
SFXN3-201ENST00000224807 EBI3Q14213 229 aa10.66□□□□□ -0.7
SFXN3-201ENST00000224807 ODF3Q96PU9 254 aa10.66□□□□□ -0.7
SFXN3-201ENST00000224807 AMELXQ99217 191 aa10.66□□□□□ -0.7
SFXN3-201ENST00000224807 ABCA12Q86UK0 2595 aa10.66□□□□□ -0.7
SFXN3-201ENST00000224807 RPL13AP40429 203 aaKnown RBP10.66□□□□□ -0.7
SFXN3-201ENST00000224807 RPL32P62910 135 aaKnown RBP10.66□□□□□ -0.7
SFXN3-201ENST00000224807 CITED1Q99966 193 aa10.66□□□□□ -0.7
SFXN3-201ENST00000224807 SIRPDQ9H106 197 aa10.66□□□□□ -0.7
SFXN3-201ENST00000224807 ZFYVE26Q68DK2 2539 aa10.65□□□□□ -0.7
SFXN3-201ENST00000224807 PPP1R17O96001 155 aa10.65□□□□□ -0.7
SFXN3-201ENST00000224807 IGHV3OR16-12A0A075B7B8 117 aa10.65□□□□□ -0.7
SFXN3-201ENST00000224807 ICOSQ9Y6W8 199 aa10.65□□□□□ -0.7
SFXN3-201ENST00000224807 TMEM223A0PJW6 202 aa10.64□□□□□ -0.71
SFXN3-201ENST00000224807 COX6CP09669 75 aa10.64□□□□□ -0.71
SFXN3-201ENST00000224807 TMEM141Q96I45 108 aa10.64□□□□□ -0.71
SFXN3-201ENST00000224807 IGKV3OR2-268A0A0C4DH90 116 aa10.64□□□□□ -0.71
SFXN3-201ENST00000224807 LEPROTO15243 131 aa10.64□□□□□ -0.71
SFXN3-201ENST00000224807 MRPL23Q16540 153 aaKnown RBP10.64□□□□□ -0.71
SFXN3-201ENST00000224807 KIF25-AS1Q9Y6Z4 181 aa10.64□□□□□ -0.71
SFXN3-201ENST00000224807 H7C423 109 aa10.63□□□□□ -0.71
SFXN3-201ENST00000224807 IGHV4-38-2P0DP08 117 aa10.63□□□□□ -0.71
SFXN3-201ENST00000224807 HOXD3P31249 432 aaPredicted RBP10.63□□□□□ -0.71
SFXN3-201ENST00000224807 IGLV4-3A0A075B6K6 122 aa10.63□□□□□ -0.71
SFXN3-201ENST00000224807 FAM236AA0A1B0GUQ0 79 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms