RNA–Protein interactions for RNA: ENST00000215794.7

USP18-201, Transcript of ubiquitin specific peptidase 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP18, Length 2,129 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP18-201ENST00000215794 ATP5LO75964 103 aa13.33□□□□□ -0.28
USP18-201ENST00000215794 PRM2P04554 102 aa13.33□□□□□ -0.28
USP18-201ENST00000215794 HTN1P15515 57 aa13.33□□□□□ -0.28
USP18-201ENST00000215794 MAP6D1Q9H9H5 199 aa13.33□□□□□ -0.28
USP18-201ENST00000215794 ADARB2-AS1A8MUL3 147 aa13.32□□□□□ -0.28
USP18-201ENST00000215794 F5H697 171 aa13.32□□□□□ -0.28
USP18-201ENST00000215794 ORMDL2Q53FV1 153 aa13.32□□□□□ -0.28
USP18-201ENST00000215794 VWFP04275 2813 aa13.32□□□□□ -0.28
USP18-201ENST00000215794 HHLA3Q9XRX5 114 aa13.31□□□□□ -0.28
USP18-201ENST00000215794 TSSC4Q9Y5U2 329 aaPredicted RBP13.31□□□□□ -0.28
USP18-201ENST00000215794 A6NDN8 102 aa13.31□□□□□ -0.28
USP18-201ENST00000215794 IGKCP01834 107 aa13.31□□□□□ -0.28
USP18-201ENST00000215794 NMUP48645 174 aa13.31□□□□□ -0.28
USP18-201ENST00000215794 PCP2Q8IVA1 136 aa13.31□□□□□ -0.28
USP18-201ENST00000215794 MRPL35Q9NZE8 188 aaKnown RBP13.31□□□□□ -0.28
USP18-201ENST00000215794 STAB1Q9NY15 2570 aa13.31□□□□□ -0.28
USP18-201ENST00000215794 TRAV2A0A0B4J234 112 aa13.3□□□□□ -0.28
USP18-201ENST00000215794 TOMM6Q96B49 74 aa13.3□□□□□ -0.28
USP18-201ENST00000215794 CLUHP3Q96NS8 147 aa13.3□□□□□ -0.28
USP18-201ENST00000215794 COL6A5A8TX70 2615 aa13.3□□□□□ -0.28
USP18-201ENST00000215794 GAGE10A6NGK3 116 aa13.3□□□□□ -0.28
USP18-201ENST00000215794 A8MTW9 85 aa13.3□□□□□ -0.28
USP18-201ENST00000215794 TMEM97Q5BJF2 176 aa13.3□□□□□ -0.28
USP18-201ENST00000215794 SYT8Q8NBV8 401 aa13.3□□□□□ -0.28
USP18-201ENST00000215794 IGKV2D-26A0A0A0MRZ7 120 aa13.29□□□□□ -0.28
USP18-201ENST00000215794 H3BRM9 83 aa13.29□□□□□ -0.28
USP18-201ENST00000215794 CRYGDP07320 174 aa13.29□□□□□ -0.28
USP18-201ENST00000215794 FHL3Q13643 280 aa13.29□□□□□ -0.28
USP18-201ENST00000215794 BOD1L2Q8IYS8 172 aa13.29□□□□□ -0.28
USP18-201ENST00000215794 ZNF256Q9Y2P7 627 aaPredicted RBP13.29□□□□□ -0.28
USP18-201ENST00000215794 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.28□□□□□ -0.28
USP18-201ENST00000215794 CCL24O00175 119 aa13.28□□□□□ -0.28
USP18-201ENST00000215794 DPM2O94777 84 aa13.28□□□□□ -0.28
USP18-201ENST00000215794 PPP1R17O96001 155 aa13.28□□□□□ -0.28
USP18-201ENST00000215794 ZNF56Q15929 161 aa13.28□□□□□ -0.28
USP18-201ENST00000215794 ZNF876PQ49A33 203 aa13.28□□□□□ -0.28
USP18-201ENST00000215794 C2orf66Q6UXQ4 117 aa13.28□□□□□ -0.28
USP18-201ENST00000215794 SCGB3A1Q96QR1 104 aa13.28□□□□□ -0.28
USP18-201ENST00000215794 SIVA1O15304 175 aa13.28□□□□□ -0.28
USP18-201ENST00000215794 GTSCR1Q86UQ5 136 aa13.28□□□□□ -0.28
USP18-201ENST00000215794 TRGV11A0A075B6L2 103 aa13.27□□□□□ -0.28
USP18-201ENST00000215794 A0A087WX48 190 aa13.27□□□□□ -0.28
USP18-201ENST00000215794 POLR2KP53803 58 aaKnown RBP13.27□□□□□ -0.28
USP18-201ENST00000215794 MORN3Q6PF18 240 aaPredicted RBP13.27□□□□□ -0.28
USP18-201ENST00000215794 TTTY13Q9BZ97 58 aa13.27□□□□□ -0.28
USP18-201ENST00000215794 ZC2HC1BQ5TFG8 222 aa13.27□□□□□ -0.29
USP18-201ENST00000215794 TRAV8-6A0A0B4J262 113 aa13.26□□□□□ -0.29
USP18-201ENST00000215794 C9orf118A6NHY6 69 aa13.26□□□□□ -0.29
USP18-201ENST00000215794 K7EMI3 77 aa13.26□□□□□ -0.29
USP18-201ENST00000215794 SDHAF1A6NFY7 115 aa13.25□□□□□ -0.29
USP18-201ENST00000215794 ODF3L2Q3SX64 289 aa13.25□□□□□ -0.29
USP18-201ENST00000215794 SPAG8Q99932 426 aaPredicted RBP13.25□□□□□ -0.29
USP18-201ENST00000215794 M0QY20 66 aa13.25□□□□□ -0.29
USP18-201ENST00000215794 UFSP1Q6NVU6 142 aa13.24□□□□□ -0.29
USP18-201ENST00000215794 SPATA3Q8NHX4 192 aa13.24□□□□□ -0.29
USP18-201ENST00000215794 BAALCQ8WXS3 180 aa13.24□□□□□ -0.29
USP18-201ENST00000215794 CITED1Q99966 193 aa13.24□□□□□ -0.29
USP18-201ENST00000215794 RPL32P62910 135 aaKnown RBP13.24□□□□□ -0.29
USP18-201ENST00000215794 ZFP2Q6ZN57 461 aa13.24□□□□□ -0.29
USP18-201ENST00000215794 ERASQ7Z444 233 aa13.24□□□□□ -0.29
USP18-201ENST00000215794 NEXN-AS1Q8NBZ9 246 aa13.24□□□□□ -0.29
USP18-201ENST00000215794 HSD52Q0P140 79 aa13.23□□□□□ -0.29
USP18-201ENST00000215794 OR5A1Q8NGJ0 315 aa13.23□□□□□ -0.29
USP18-201ENST00000215794 IGHV3-73A0A0B4J1V6 119 aa13.22□□□□□ -0.29
USP18-201ENST00000215794 TRAV12-1A0A0B4J245 112 aa13.22□□□□□ -0.29
USP18-201ENST00000215794 VCYO14598 125 aa13.22□□□□□ -0.29
USP18-201ENST00000215794 RPL39P62891 51 aaKnown RBP13.22□□□□□ -0.29
USP18-201ENST00000215794 NDUFA11Q86Y39 141 aa13.22□□□□□ -0.29
USP18-201ENST00000215794 TP53TG1Q9Y2A0 90 aa13.22□□□□□ -0.29
USP18-201ENST00000215794 TRBV6-5A0A0K0K1A5 114 aa13.22□□□□□ -0.29
USP18-201ENST00000215794 F8VRH5 84 aa13.22□□□□□ -0.29
USP18-201ENST00000215794 G3V4G9 280 aa13.22□□□□□ -0.29
USP18-201ENST00000215794 H7C1H1 209 aa13.21□□□□□ -0.29
USP18-201ENST00000215794 K7EP34 96 aa13.21□□□□□ -0.29
USP18-201ENST00000215794 KIR2DL4Q99706 377 aa13.21□□□□□ -0.29
USP18-201ENST00000215794 TRBV27A0A0K0K1C4 114 aa13.21□□□□□ -0.3
USP18-201ENST00000215794 TSHBP01222 138 aa13.21□□□□□ -0.3
USP18-201ENST00000215794 CYSLTR1Q9Y271 337 aa13.21□□□□□ -0.3
USP18-201ENST00000215794 PLNP26678 52 aa13.2□□□□□ -0.3
USP18-201ENST00000215794 LINC01587Q99440 93 aa13.2□□□□□ -0.3
USP18-201ENST00000215794 C3orf56Q8N813 242 aa13.19□□□□□ -0.3
USP18-201ENST00000215794 TRAV25A0A0B4J276 109 aa13.19□□□□□ -0.3
USP18-201ENST00000215794 PRSS29PA6NIE9 313 aa13.19□□□□□ -0.3
USP18-201ENST00000215794 P0DMU3 169 aa13.19□□□□□ -0.3
USP18-201ENST00000215794 FAM231AP0DMU4 169 aa13.19□□□□□ -0.3
USP18-201ENST00000215794 FAM231CP0DMU5 169 aa13.19□□□□□ -0.3
USP18-201ENST00000215794 TRPT1Q86TN4 253 aaKnown RBP13.19□□□□□ -0.3
USP18-201ENST00000215794 MDFIQ99750 246 aa13.19□□□□□ -0.3
USP18-201ENST00000215794 XCL2Q9UBD3 114 aa13.19□□□□□ -0.3
USP18-201ENST00000215794 INSP01308 110 aa13.18□□□□□ -0.3
USP18-201ENST00000215794 IGIPA6NJ69 53 aa13.18□□□□□ -0.3
USP18-201ENST00000215794 PF4P02776 101 aa13.18□□□□□ -0.3
USP18-201ENST00000215794 C11orf72Q8NBR9 251 aa13.18□□□□□ -0.3
USP18-201ENST00000215794 M0R2P5 195 aa13.17□□□□□ -0.3
USP18-201ENST00000215794 ZNF415Q09FC8 603 aa13.17□□□□□ -0.3
USP18-201ENST00000215794 STHQ8IWL8 128 aa13.17□□□□□ -0.3
USP18-201ENST00000215794 MAPKAPK5-AS1Q8N8E1 139 aa13.17□□□□□ -0.3
USP18-201ENST00000215794 OR11H12B2RN74 326 aa13.16□□□□□ -0.3
USP18-201ENST00000215794 SAP30O75446 220 aa13.16□□□□□ -0.3
USP18-201ENST00000215794 RIPPLY3P57055 190 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms