RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 SUMO4Q6EEV6 95 aa12.82□□□□□ -0.36
SCARB2-210ENST00000638567 ZNF48Q96MX3 618 aaPredicted RBP12.82□□□□□ -0.36
SCARB2-210ENST00000638567 WFDC2Q14508 124 aa12.81□□□□□ -0.36
SCARB2-210ENST00000638567 CMC4P56277 68 aaPredicted RBP12.81□□□□□ -0.36
SCARB2-210ENST00000638567 FOXI2Q6ZQN5 318 aa12.81□□□□□ -0.36
SCARB2-210ENST00000638567 HIGD1BQ9P298 99 aa12.81□□□□□ -0.36
SCARB2-210ENST00000638567 H3BMM0 161 aa12.81□□□□□ -0.36
SCARB2-210ENST00000638567 LINC00310P59036 64 aa12.81□□□□□ -0.36
SCARB2-210ENST00000638567 UBE2WQ96B02 151 aa12.81□□□□□ -0.36
SCARB2-210ENST00000638567 MKI67P46013 3256 aaKnown RBP12.8□□□□□ -0.36
SCARB2-210ENST00000638567 RPL39P62891 51 aaKnown RBP12.8□□□□□ -0.36
SCARB2-210ENST00000638567 ZFP2Q6ZN57 461 aa12.8□□□□□ -0.36
SCARB2-210ENST00000638567 HIVEP3Q5T1R4 2406 aa12.8□□□□□ -0.36
SCARB2-210ENST00000638567 CRYGBP07316 175 aa12.79□□□□□ -0.36
SCARB2-210ENST00000638567 HOXD3P31249 432 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-210ENST00000638567 CRIP1P50238 77 aa12.79□□□□□ -0.36
SCARB2-210ENST00000638567 UNQ9165/PRO28630Q6UXU0 137 aa12.79□□□□□ -0.36
SCARB2-210ENST00000638567 C1QTNF4Q9BXJ3 329 aa12.79□□□□□ -0.36
SCARB2-210ENST00000638567 ELANEP08246 267 aa12.79□□□□□ -0.36
SCARB2-210ENST00000638567 RHOHQ15669 191 aa12.79□□□□□ -0.36
SCARB2-210ENST00000638567 A0A0J9YXV3 536 aa12.78□□□□□ -0.36
SCARB2-210ENST00000638567 LINC01548A6NM66 108 aa12.78□□□□□ -0.36
SCARB2-210ENST00000638567 SIRPDQ9H106 197 aa12.78□□□□□ -0.36
SCARB2-210ENST00000638567 CFC1BP0CG36 223 aa12.78□□□□□ -0.36
SCARB2-210ENST00000638567 CFC1P0CG37 223 aa12.78□□□□□ -0.36
SCARB2-210ENST00000638567 DEFB136Q30KP8 78 aa12.78□□□□□ -0.36
SCARB2-210ENST00000638567 IGHV4-30-2A0A087WSY4 118 aa12.78□□□□□ -0.36
SCARB2-210ENST00000638567 SP5Q6BEB4 398 aaPredicted RBP12.78□□□□□ -0.36
SCARB2-210ENST00000638567 CPAMD8Q8IZJ3 1885 aa12.78□□□□□ -0.36
SCARB2-210ENST00000638567 S100A7L2Q5SY68 101 aa12.78□□□□□ -0.36
SCARB2-210ENST00000638567 NTN5Q8WTR8 489 aaPredicted RBP12.78□□□□□ -0.36
SCARB2-210ENST00000638567 TRBV12-3P01733 135 aa12.77□□□□□ -0.36
SCARB2-210ENST00000638567 SRSF2Q01130 221 aaKnown RBP12.77□□□□□ -0.36
SCARB2-210ENST00000638567 FBXL19-AS1Q494R0 122 aa12.77□□□□□ -0.36
SCARB2-210ENST00000638567 IGLC6P0CF74 106 aa12.77□□□□□ -0.37
SCARB2-210ENST00000638567 SETD2Q9BYW2 2564 aaPredicted RBP12.77□□□□□ -0.37
SCARB2-210ENST00000638567 USP9YO00507 2555 aaPredicted RBP12.76□□□□□ -0.37
SCARB2-210ENST00000638567 USP9XQ93008 2570 aaPredicted RBP12.76□□□□□ -0.37
SCARB2-210ENST00000638567 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.76□□□□□ -0.37
SCARB2-210ENST00000638567 IGKV2-29A2NJV5 120 aaPredicted RBP12.76□□□□□ -0.37
SCARB2-210ENST00000638567 GAGE7O76087 117 aa12.76□□□□□ -0.37
SCARB2-210ENST00000638567 GAGE12FP0CL80 117 aa12.76□□□□□ -0.37
SCARB2-210ENST00000638567 GAGE12GP0CL81 117 aa12.76□□□□□ -0.37
SCARB2-210ENST00000638567 GAGE12IP0CL82 117 aa12.76□□□□□ -0.37
SCARB2-210ENST00000638567 BAALCQ8WXS3 180 aa12.76□□□□□ -0.37
SCARB2-210ENST00000638567 CCDC140Q96MF4 163 aa12.76□□□□□ -0.37
SCARB2-210ENST00000638567 JPT2Q9H910 190 aa12.76□□□□□ -0.37
SCARB2-210ENST00000638567 GAGE2AQ6NT46 116 aa12.76□□□□□ -0.37
SCARB2-210ENST00000638567 TRAV12-1A0A0B4J245 112 aa12.75□□□□□ -0.37
SCARB2-210ENST00000638567 PFN2P35080 140 aa12.75□□□□□ -0.37
SCARB2-210ENST00000638567 ODF3BA8MYP8 253 aa12.75□□□□□ -0.37
SCARB2-210ENST00000638567 A4D1N5 150 aa12.75□□□□□ -0.37
SCARB2-210ENST00000638567 IGLV2-11P01706 119 aa12.74□□□□□ -0.37
SCARB2-210ENST00000638567 LGALS1P09382 135 aaKnown RBP12.74□□□□□ -0.37
SCARB2-210ENST00000638567 C11orf86A6NJI1 115 aa12.74□□□□□ -0.37
SCARB2-210ENST00000638567 E9PLD3 99 aa12.74□□□□□ -0.37
SCARB2-210ENST00000638567 Q8N1Y9 231 aa12.74□□□□□ -0.37
SCARB2-210ENST00000638567 TOMM6Q96B49 74 aa12.74□□□□□ -0.37
SCARB2-210ENST00000638567 TMEM243Q9BU79 118 aa12.73□□□□□ -0.37
SCARB2-210ENST00000638567 J3QLI3 93 aa12.73□□□□□ -0.37
SCARB2-210ENST00000638567 CARD19Q96LW7 228 aa12.73□□□□□ -0.37
SCARB2-210ENST00000638567 VPREB3Q9UKI3 123 aa12.73□□□□□ -0.37
SCARB2-210ENST00000638567 DSCAMO60469 2012 aa12.73□□□□□ -0.37
SCARB2-210ENST00000638567 GAGE6Q13070 117 aa12.72□□□□□ -0.37
SCARB2-210ENST00000638567 Q96MF0 132 aa12.72□□□□□ -0.37
SCARB2-210ENST00000638567 BRCA2P51587 3418 aa12.72□□□□□ -0.37
SCARB2-210ENST00000638567 U3KQE9 123 aa12.72□□□□□ -0.37
SCARB2-210ENST00000638567 HIVEP2P31629 2446 aa12.72□□□□□ -0.37
SCARB2-210ENST00000638567 HIST1H4AP62805 103 aaKnown RBP12.72□□□□□ -0.37
SCARB2-210ENST00000638567 LY6LH3BQJ8 138 aa12.71□□□□□ -0.37
SCARB2-210ENST00000638567 SLURP1P55000 103 aa12.71□□□□□ -0.38
SCARB2-210ENST00000638567 C10orf105Q8TEF2 133 aa12.71□□□□□ -0.38
SCARB2-210ENST00000638567 IGHG2P01859 326 aa12.7□□□□□ -0.38
SCARB2-210ENST00000638567 APRG1Q8IVJ8 170 aa12.7□□□□□ -0.38
SCARB2-210ENST00000638567 SS18Q15532 418 aa12.7□□□□□ -0.38
SCARB2-210ENST00000638567 MUSTN1Q8IVN3 82 aa12.7□□□□□ -0.38
SCARB2-210ENST00000638567 HERVK_113P63121 156 aa12.7□□□□□ -0.38
SCARB2-210ENST00000638567 IGKV2D-26A0A0A0MRZ7 120 aa12.7□□□□□ -0.38
SCARB2-210ENST00000638567 LMO4P61968 165 aa12.7□□□□□ -0.38
SCARB2-210ENST00000638567 IGF1P05019 195 aa12.69□□□□□ -0.38
SCARB2-210ENST00000638567 NRGNQ92686 78 aa12.69□□□□□ -0.38
SCARB2-210ENST00000638567 Q9H8V8 135 aa12.69□□□□□ -0.38
SCARB2-210ENST00000638567 LAMA3Q16787 3333 aa12.69□□□□□ -0.38
SCARB2-210ENST00000638567 MDFICQ9P1T7 246 aa12.69□□□□□ -0.38
SCARB2-210ENST00000638567 OVOL2Q9BRP0 275 aa12.68□□□□□ -0.38
SCARB2-210ENST00000638567 TIMM17AQ99595 171 aa12.68□□□□□ -0.38
SCARB2-210ENST00000638567 LAMTOR3Q9UHA4 124 aa12.68□□□□□ -0.38
SCARB2-210ENST00000638567 SMAD5-AS1Q9Y6J3 95 aa12.68□□□□□ -0.38
SCARB2-210ENST00000638567 LAMA2P24043 3122 aaKnown RBP12.68□□□□□ -0.38
SCARB2-210ENST00000638567 MED14OSP0DP75 135 aa12.68□□□□□ -0.38
SCARB2-210ENST00000638567 Q8N976 141 aa12.68□□□□□ -0.38
SCARB2-210ENST00000638567 OPRPNQ99935 248 aaPredicted RBP12.68□□□□□ -0.38
SCARB2-210ENST00000638567 G3V4G9 280 aa12.67□□□□□ -0.38
SCARB2-210ENST00000638567 K7EMT4 169 aa12.67□□□□□ -0.38
SCARB2-210ENST00000638567 NXPH4O95158 308 aa12.67□□□□□ -0.38
SCARB2-210ENST00000638567 INAFM2P0DMQ5 153 aa12.67□□□□□ -0.38
SCARB2-210ENST00000638567 TEN1Q86WV5 123 aa12.66□□□□□ -0.38
SCARB2-210ENST00000638567 SPANXA1Q9NS26 97 aa12.66□□□□□ -0.38
SCARB2-210ENST00000638567 IGHV4OR15-8A0A075B7B6 117 aa12.66□□□□□ -0.38
SCARB2-210ENST00000638567 A0A087WW49 117 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms