RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 SULT1A1P50225 295 aa2.81□□□□□ -1.96
SNCA-213ENST00000618500 RAB4BP61018 213 aa2.81□□□□□ -1.96
SNCA-213ENST00000618500 HBG1P69891 147 aa2.81□□□□□ -1.96
SNCA-213ENST00000618500 HBG2P69892 147 aa2.81□□□□□ -1.96
SNCA-213ENST00000618500 GAGE1Q13065 139 aa2.81□□□□□ -1.96
SNCA-213ENST00000618500 GAGE4Q13068 117 aa2.81□□□□□ -1.96
SNCA-213ENST00000618500 GAGE5Q13069 117 aa2.81□□□□□ -1.96
SNCA-213ENST00000618500 FAM74A1Q5RGS3 127 aa2.81□□□□□ -1.96
SNCA-213ENST00000618500 PHYHIPLQ96FC7 376 aa2.81□□□□□ -1.96
SNCA-213ENST00000618500 SAMD10Q9BYL1 202 aa2.81□□□□□ -1.96
SNCA-213ENST00000618500 GVQW2A0A096LPI5 108 aaPredicted RBP2.81□□□□□ -1.96
SNCA-213ENST00000618500 TRAV26-2A0A0B4J265 109 aa2.81□□□□□ -1.96
SNCA-213ENST00000618500 A0A1B0GUV1 79 aa2.81□□□□□ -1.96
SNCA-213ENST00000618500 NDFIP1Q9BT67 221 aa2.81□□□□□ -1.96
SNCA-213ENST00000618500 NPCDR1Q9BY65 106 aa2.81□□□□□ -1.96
SNCA-213ENST00000618500 MUC2Q02817 5179 aa2.8□□□□□ -1.96
SNCA-213ENST00000618500 TRBV7-3A0A075B6L6 115 aa2.8□□□□□ -1.96
SNCA-213ENST00000618500 TRIAP1O43715 76 aa2.8□□□□□ -1.96
SNCA-213ENST00000618500 RPL13AP40429 203 aaKnown RBP2.8□□□□□ -1.96
SNCA-213ENST00000618500 RPL36AP83881 106 aaKnown RBP2.8□□□□□ -1.96
SNCA-213ENST00000618500 TMEM75Q8N9X5 138 aa2.8□□□□□ -1.96
SNCA-213ENST00000618500 RPL36ALQ969Q0 106 aaKnown RBP2.8□□□□□ -1.96
SNCA-213ENST00000618500 TVP23CQ96ET8 276 aa2.8□□□□□ -1.96
SNCA-213ENST00000618500 OR5AC2Q9NZP5 309 aa2.8□□□□□ -1.96
SNCA-213ENST00000618500 MBPP02686 304 aaPredicted RBP2.8□□□□□ -1.96
SNCA-213ENST00000618500 VBP1P61758 197 aa2.8□□□□□ -1.96
SNCA-213ENST00000618500 C14orf178Q8N769 122 aaPredicted RBP2.8□□□□□ -1.96
SNCA-213ENST00000618500 TRBV6-1A0A0K0K1D8 114 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 C7orf66A4D0T2 115 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 NDUFB6O95139 128 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 IFNA7P01567 189 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 CAV2P51636 162 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 TAS2R45P59539 299 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 S100A10P60903 97 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 IQCJQ1A5X6 159 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 MIR17HGQ75NE6 70 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 SLPIP03973 132 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 FGF7P21781 194 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 IL15RAQ13261 267 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 KRTAP19-4Q3LI73 84 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.79□□□□□ -1.96
SNCA-213ENST00000618500 DNAJC30Q96LL9 226 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 C11orf21Q9P2W6 132 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 C17orf112F2Z3M2 114 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 H7C1H1 209 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 L7N2F9 121 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 HLA-DQA1P01909 254 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 PVALBP20472 110 aaPredicted RBP2.79□□□□□ -1.96
SNCA-213ENST00000618500 RPS10P46783 165 aaKnown RBP2.79□□□□□ -1.96
SNCA-213ENST00000618500 VAMP2P63027 116 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 BAXQ07812 192 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 IAH1Q2TAA2 248 aaPredicted RBP2.79□□□□□ -1.96
SNCA-213ENST00000618500 MPV17L2Q567V2 206 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 SAPCD1Q5SSQ6 148 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 C15orf56Q8N910 161 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 KRTAP9-3Q9BYQ3 159 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 TREM1Q9NP99 234 aa2.79□□□□□ -1.96
SNCA-213ENST00000618500 UBE2L5PA0A1B0GUS4 154 aa2.78□□□□□ -1.96
SNCA-213ENST00000618500 LSM3P62310 102 aaKnown RBP2.78□□□□□ -1.96
SNCA-213ENST00000618500 SPCS2Q15005 226 aa2.78□□□□□ -1.96
SNCA-213ENST00000618500 SMUG1Q53HV7 270 aa2.78□□□□□ -1.96
SNCA-213ENST00000618500 STX12Q86Y82 276 aa2.78□□□□□ -1.96
SNCA-213ENST00000618500 OR2G3Q8NGZ4 309 aa2.78□□□□□ -1.96
SNCA-213ENST00000618500 TSKUQ8WUA8 353 aa2.78□□□□□ -1.96
SNCA-213ENST00000618500 DIRC1Q969H9 104 aa2.78□□□□□ -1.96
SNCA-213ENST00000618500 NAGKQ9UJ70 344 aa2.78□□□□□ -1.96
SNCA-213ENST00000618500 UBE2L3P68036 154 aaKnown RBP2.78□□□□□ -1.96
SNCA-213ENST00000618500 PQLC2Q6ZP29 291 aa2.78□□□□□ -1.96
SNCA-213ENST00000618500 ZFP82Q8N141 532 aa2.78□□□□□ -1.96
SNCA-213ENST00000618500 OR11H4Q8NGC9 324 aa2.78□□□□□ -1.96
SNCA-213ENST00000618500 PGLYRP4Q96LB8 373 aa2.78□□□□□ -1.96
SNCA-213ENST00000618500 MCUBQ9NWR8 336 aa2.78□□□□□ -1.96
SNCA-213ENST00000618500 hDV102S1A0JD36 115 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 KRBOX1C9JBD0 128 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 F8WDY8 70 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 H0Y9J4 135 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 K7EQM0 130 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 CTDSP2O14595 271 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 ANGP03950 147 aaKnown RBP2.77□□□□□ -1.97
SNCA-213ENST00000618500 RBX1P62877 108 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 TPRXLQ17RH7 258 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 SPANXN2Q5MJ10 180 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 TOMM5Q8N4H5 51 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 TMEM252Q8N6L7 170 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 C15orf54Q8N8G6 183 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 FER1L6-AS1Q8NA97 138 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 C5orf17Q8NAS9 161 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 MCFD2Q8NI22 146 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 CMTM2Q8TAZ6 248 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 FAM210AQ96ND0 272 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 WDR61Q9GZS3 305 aaKnown RBP2.77□□□□□ -1.97
SNCA-213ENST00000618500 GSKIPQ9P0R6 139 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 IGSF23A1L1A6 192 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 FAM24AA6NFZ4 105 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 CHTF8P0CG12 524 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 ZNF80P51504 273 aaPredicted RBP2.77□□□□□ -1.97
SNCA-213ENST00000618500 CACNG7P62955 275 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 ZFP69Q49AA0 526 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 STPG4Q8N801 248 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 NEXN-AS1Q8NBZ9 246 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms