RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 ZFP2Q6ZN57 461 aa17.08■□□□□ 0.32
PMS1-220ENST00000618056 SH2D6Q7Z4S9 175 aa17.08■□□□□ 0.32
PMS1-220ENST00000618056 C6orf223Q8N319 242 aa17.08■□□□□ 0.32
PMS1-220ENST00000618056 A0A1B0GVY2 172 aa17.07■□□□□ 0.32
PMS1-220ENST00000618056 DERL1Q9BUN8 251 aa17.07■□□□□ 0.32
PMS1-220ENST00000618056 KRTAP1-5Q9BYS1 174 aa17.07■□□□□ 0.32
PMS1-220ENST00000618056 PARLQ9H300 379 aa17.07■□□□□ 0.32
PMS1-220ENST00000618056 NAT8Q9UHE5 227 aa17.07■□□□□ 0.32
PMS1-220ENST00000618056 LOC100131303A0A0U1RQF7 123 aa17.06■□□□□ 0.32
PMS1-220ENST00000618056 SIVA1O15304 175 aa17.06■□□□□ 0.32
PMS1-220ENST00000618056 NXPH4O95158 308 aa17.06■□□□□ 0.32
PMS1-220ENST00000618056 CXCL1P09341 107 aa17.06■□□□□ 0.32
PMS1-220ENST00000618056 MGST1P10620 155 aaKnown RBP17.06■□□□□ 0.32
PMS1-220ENST00000618056 RHOHQ15669 191 aa17.06■□□□□ 0.32
PMS1-220ENST00000618056 SYT8Q8NBV8 401 aa17.06■□□□□ 0.32
PMS1-220ENST00000618056 TMSB15BA0A087X1C1 80 aa17.05■□□□□ 0.32
PMS1-220ENST00000618056 IGHV3-73A0A0B4J1V6 119 aa17.05■□□□□ 0.32
PMS1-220ENST00000618056 DMRTA1Q5VZB9 504 aa17.05■□□□□ 0.32
PMS1-220ENST00000618056 PRADC1Q9BSG0 188 aa17.05■□□□□ 0.32
PMS1-220ENST00000618056 MED14OSP0DP75 135 aa17.05■□□□□ 0.32
PMS1-220ENST00000618056 PHLDA3Q9Y5J5 127 aa17.05■□□□□ 0.32
PMS1-220ENST00000618056 BTF3P20290 206 aaKnown RBP17.04■□□□□ 0.32
PMS1-220ENST00000618056 UFSP1Q6NVU6 142 aa17.04■□□□□ 0.32
PMS1-220ENST00000618056 A0A087WWC5 75 aa17.03■□□□□ 0.32
PMS1-220ENST00000618056 TIRAPP58753 221 aa17.03■□□□□ 0.32
PMS1-220ENST00000618056 TMEM241Q24JQ0 296 aa17.03■□□□□ 0.32
PMS1-220ENST00000618056 CENPWQ5EE01 88 aa17.03■□□□□ 0.32
PMS1-220ENST00000618056 SMIM12Q96EX1 92 aa17.03■□□□□ 0.32
PMS1-220ENST00000618056 JPT2Q9H910 190 aa17.03■□□□□ 0.32
PMS1-220ENST00000618056 RPL19P84098 196 aaKnown RBP17.02■□□□□ 0.32
PMS1-220ENST00000618056 PRR27Q6MZM9 219 aa17.02■□□□□ 0.32
PMS1-220ENST00000618056 IGLV2-8P01709 118 aa17.01■□□□□ 0.31
PMS1-220ENST00000618056 ZFP82Q8N141 532 aa17.01■□□□□ 0.31
PMS1-220ENST00000618056 C15orf54Q8N8G6 183 aa17.01■□□□□ 0.31
PMS1-220ENST00000618056 RHODO00212 210 aa17■□□□□ 0.31
PMS1-220ENST00000618056 ADIRFQ15847 76 aa17■□□□□ 0.31
PMS1-220ENST00000618056 SFRP2Q96HF1 295 aa17■□□□□ 0.31
PMS1-220ENST00000618056 SAMD10Q9BYL1 202 aa17■□□□□ 0.31
PMS1-220ENST00000618056 GNG4P50150 75 aa16.99■□□□□ 0.31
PMS1-220ENST00000618056 Q6ZSN1 163 aa16.99■□□□□ 0.31
PMS1-220ENST00000618056 M0R381 172 aa16.99■□□□□ 0.31
PMS1-220ENST00000618056 SSBP4Q9BWG4 385 aaPredicted RBP16.99■□□□□ 0.31
PMS1-220ENST00000618056 SNAI2O43623 268 aa16.98■□□□□ 0.31
PMS1-220ENST00000618056 RPL23P62829 140 aaKnown RBP16.98■□□□□ 0.31
PMS1-220ENST00000618056 TRBV20OR9-2A0A075B6H5 130 aa16.97■□□□□ 0.31
PMS1-220ENST00000618056 WFDC10BQ8IUB3 73 aa16.97■□□□□ 0.31
PMS1-220ENST00000618056 K7EP13 123 aa16.96■□□□□ 0.31
PMS1-220ENST00000618056 CRYGDP07320 174 aa16.96■□□□□ 0.31
PMS1-220ENST00000618056 OR5AL1P0C617 328 aa16.96■□□□□ 0.31
PMS1-220ENST00000618056 LY96Q9Y6Y9 160 aa16.96■□□□□ 0.31
PMS1-220ENST00000618056 C19orf71A6NCJ1 209 aa16.95■□□□□ 0.3
PMS1-220ENST00000618056 TNP2Q05952 138 aa16.95■□□□□ 0.3
PMS1-220ENST00000618056 FAM74A4Q5TZK3 123 aa16.95■□□□□ 0.3
PMS1-220ENST00000618056 OR10AG1Q8NH19 301 aa16.95■□□□□ 0.3
PMS1-220ENST00000618056 ISOC2Q96AB3 205 aa16.95■□□□□ 0.3
PMS1-220ENST00000618056 CTDSP1Q9GZU7 261 aa16.95■□□□□ 0.3
PMS1-220ENST00000618056 DNAH11Q96DT5 4516 aa16.95■□□□□ 0.3
PMS1-220ENST00000618056 COLCA2A8K830 154 aa16.94■□□□□ 0.3
PMS1-220ENST00000618056 MT-ND4LP03901 98 aa16.94■□□□□ 0.3
PMS1-220ENST00000618056 DNAH10OSP0CZ25 163 aa16.94■□□□□ 0.3
PMS1-220ENST00000618056 LINC00694P0DN24 101 aa16.94■□□□□ 0.3
PMS1-220ENST00000618056 DAZAP1Q96EP5 407 aaKnown RBP16.94■□□□□ 0.3
PMS1-220ENST00000618056 TRAV9-2A0A087WT02 112 aa16.93■□□□□ 0.3
PMS1-220ENST00000618056 A0A087WWL8 130 aa16.93■□□□□ 0.3
PMS1-220ENST00000618056 LINC00315P59091 139 aa16.93■□□□□ 0.3
PMS1-220ENST00000618056 C14orf178Q8N769 122 aaPredicted RBP16.93■□□□□ 0.3
PMS1-220ENST00000618056 ATP6V0E2Q8NHE4 81 aa16.93■□□□□ 0.3
PMS1-220ENST00000618056 BIN3Q9NQY0 253 aa16.93■□□□□ 0.3
PMS1-220ENST00000618056 TMEM242Q9NWH2 141 aa16.93■□□□□ 0.3
PMS1-220ENST00000618056 GTSF1LQ9H1H1 148 aa16.93■□□□□ 0.3
PMS1-220ENST00000618056 DYNC1H1Q14204 4646 aaKnown RBP16.92■□□□□ 0.3
PMS1-220ENST00000618056 RPS20P60866 119 aaKnown RBP16.92■□□□□ 0.3
PMS1-220ENST00000618056 LINC01551Q86U37 167 aa16.92■□□□□ 0.3
PMS1-220ENST00000618056 EVI2AP22794 236 aa16.91■□□□□ 0.3
PMS1-220ENST00000618056 LELP1Q5T871 98 aa16.91■□□□□ 0.3
PMS1-220ENST00000618056 Q9UF83 564 aa16.91■□□□□ 0.3
PMS1-220ENST00000618056 GAGE12JA6NER3 117 aa16.9■□□□□ 0.3
PMS1-220ENST00000618056 GAGE1Q13065 139 aa16.9■□□□□ 0.3
PMS1-220ENST00000618056 GAGE4Q13068 117 aa16.9■□□□□ 0.3
PMS1-220ENST00000618056 GAGE5Q13069 117 aa16.9■□□□□ 0.3
PMS1-220ENST00000618056 GAGE13Q4V321 117 aa16.9■□□□□ 0.3
PMS1-220ENST00000618056 SPANXN1Q5VSR9 72 aa16.9■□□□□ 0.3
PMS1-220ENST00000618056 OR2D3Q8NGH3 330 aa16.9■□□□□ 0.3
PMS1-220ENST00000618056 ANAPC16Q96DE5 110 aa16.9■□□□□ 0.3
PMS1-220ENST00000618056 TRAV8-6A0A0B4J262 113 aa16.89■□□□□ 0.29
PMS1-220ENST00000618056 P01737 135 aa16.89■□□□□ 0.29
PMS1-220ENST00000618056 IGLC6P0CF74 106 aa16.89■□□□□ 0.29
PMS1-220ENST00000618056 Q6ZRN7 208 aaPredicted RBP16.89■□□□□ 0.29
PMS1-220ENST00000618056 YPEL4Q96NS1 127 aa16.89■□□□□ 0.29
PMS1-220ENST00000618056 IGHV3-38A0A0C4DH36 116 aa16.88■□□□□ 0.29
PMS1-220ENST00000618056 TRBV10-1A0A0K0K1A3 114 aa16.88■□□□□ 0.29
PMS1-220ENST00000618056 LINC01556Q5JQF7 62 aa16.87■□□□□ 0.29
PMS1-220ENST00000618056 OR10J3Q5JRS4 329 aa16.87■□□□□ 0.29
PMS1-220ENST00000618056 C10orf126Q8N4M7 172 aa16.87■□□□□ 0.29
PMS1-220ENST00000618056 MUC21A0A0G2JKD1 596 aa16.86■□□□□ 0.29
PMS1-220ENST00000618056 MUC21A0A140T8X8 626 aa16.86■□□□□ 0.29
PMS1-220ENST00000618056 XKRY2A2RUG3 117 aa16.86■□□□□ 0.29
PMS1-220ENST00000618056 GZMBP10144 247 aa16.86■□□□□ 0.29
PMS1-220ENST00000618056 FER1L6-AS1Q8NA97 138 aa16.86■□□□□ 0.29
PMS1-220ENST00000618056 PPP1R2P9O14990 202 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms