RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 LINC00614P0C842 121 aa12.24□□□□□ -0.45
TRAPPC3-210ENST00000617904 NIT1Q86X76 327 aa12.24□□□□□ -0.45
TRAPPC3-210ENST00000617904 KIR2DL5AQ8N109 375 aa12.24□□□□□ -0.45
TRAPPC3-210ENST00000617904 C14orf178Q8N769 122 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC3-210ENST00000617904 KIR2DL5BQ8NHK3 375 aa12.24□□□□□ -0.45
TRAPPC3-210ENST00000617904 NXT2Q9NPJ8 142 aaKnown RBP12.24□□□□□ -0.45
TRAPPC3-210ENST00000617904 GSN-AS1Q9NRJ2 163 aa12.24□□□□□ -0.45
TRAPPC3-210ENST00000617904 MDFICQ9P1T7 246 aa12.24□□□□□ -0.45
TRAPPC3-210ENST00000617904 H7C1H1 209 aa12.23□□□□□ -0.45
TRAPPC3-210ENST00000617904 RRN3P1Q2M238 152 aa12.23□□□□□ -0.45
TRAPPC3-210ENST00000617904 TMEM263Q8WUH6 116 aaKnown RBP12.23□□□□□ -0.45
TRAPPC3-210ENST00000617904 C16orf74Q96GX8 76 aa12.23□□□□□ -0.45
TRAPPC3-210ENST00000617904 F5H697 171 aa12.22□□□□□ -0.45
TRAPPC3-210ENST00000617904 RHODO00212 210 aa12.22□□□□□ -0.45
TRAPPC3-210ENST00000617904 RBMY1A1P0DJD3 496 aaKnown RBP12.22□□□□□ -0.45
TRAPPC3-210ENST00000617904 RBMY1CP0DJD4 496 aa12.22□□□□□ -0.45
TRAPPC3-210ENST00000617904 AMTP48728 403 aa12.22□□□□□ -0.45
TRAPPC3-210ENST00000617904 KRTAP10-11P60412 298 aa12.22□□□□□ -0.45
TRAPPC3-210ENST00000617904 RBMY1FQ15415 496 aaKnown RBP12.22□□□□□ -0.45
TRAPPC3-210ENST00000617904 IQCJQ1A5X6 159 aa12.22□□□□□ -0.45
TRAPPC3-210ENST00000617904 RNF185Q96GF1 192 aa12.22□□□□□ -0.45
TRAPPC3-210ENST00000617904 HIST1H2BLQ99880 126 aa12.22□□□□□ -0.45
TRAPPC3-210ENST00000617904 SMIM9A6NGZ8 99 aa12.21□□□□□ -0.45
TRAPPC3-210ENST00000617904 TNFRSF6BO95407 300 aa12.21□□□□□ -0.45
TRAPPC3-210ENST00000617904 C1orf158Q8N1D5 194 aa12.21□□□□□ -0.45
TRAPPC3-210ENST00000617904 OR10D4PQ8NGN7 298 aa12.21□□□□□ -0.45
TRAPPC3-210ENST00000617904 WFDC10AQ9H1F0 79 aa12.21□□□□□ -0.45
TRAPPC3-210ENST00000617904 AP5S1Q9NUS5 200 aa12.21□□□□□ -0.45
TRAPPC3-210ENST00000617904 SMIM6P0DI80 62 aa12.2□□□□□ -0.46
TRAPPC3-210ENST00000617904 C20orf78Q9BR46 151 aa12.2□□□□□ -0.46
TRAPPC3-210ENST00000617904 DNAH9Q9NYC9 4486 aa12.19□□□□□ -0.46
TRAPPC3-210ENST00000617904 CIDEAO60543 219 aa12.19□□□□□ -0.46
TRAPPC3-210ENST00000617904 G0S2P27469 103 aa12.19□□□□□ -0.46
TRAPPC3-210ENST00000617904 ZNF56Q15929 161 aa12.19□□□□□ -0.46
TRAPPC3-210ENST00000617904 LOC389332A0A1B0GUA5 103 aa12.18□□□□□ -0.46
TRAPPC3-210ENST00000617904 K7EMI3 77 aa12.18□□□□□ -0.46
TRAPPC3-210ENST00000617904 NCR2O95944 276 aa12.18□□□□□ -0.46
TRAPPC3-210ENST00000617904 EGFEM1PQ0D2K5 195 aa12.18□□□□□ -0.46
TRAPPC3-210ENST00000617904 LGALS9BQ3B8N2 356 aa12.18□□□□□ -0.46
TRAPPC3-210ENST00000617904 FAM74A4Q5TZK3 123 aa12.18□□□□□ -0.46
TRAPPC3-210ENST00000617904 KMT2CQ8NEZ4 4911 aaKnown RBP12.17□□□□□ -0.46
TRAPPC3-210ENST00000617904 NPYP01303 97 aa12.17□□□□□ -0.46
TRAPPC3-210ENST00000617904 DEFB121Q5J5C9 76 aa12.17□□□□□ -0.46
TRAPPC3-210ENST00000617904 POM121L12Q8N7R1 296 aa12.17□□□□□ -0.46
TRAPPC3-210ENST00000617904 PRSS47A8MTI9 375 aa12.16□□□□□ -0.46
TRAPPC3-210ENST00000617904 SMKR1H3BMG3 65 aa12.16□□□□□ -0.46
TRAPPC3-210ENST00000617904 TCAPO15273 167 aa12.16□□□□□ -0.46
TRAPPC3-210ENST00000617904 DAZ2Q13117 558 aaKnown RBP12.16□□□□□ -0.46
TRAPPC3-210ENST00000617904 ZNF705AQ6ZN79 300 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC3-210ENST00000617904 Q8N8P6 123 aa12.16□□□□□ -0.46
TRAPPC3-210ENST00000617904 ST20Q9HBF5 79 aa12.16□□□□□ -0.46
TRAPPC3-210ENST00000617904 HSPB8Q9UJY1 196 aa12.16□□□□□ -0.46
TRAPPC3-210ENST00000617904 A0A087WWL8 130 aa12.15□□□□□ -0.46
TRAPPC3-210ENST00000617904 LINC01549A6NIU2 74 aa12.15□□□□□ -0.46
TRAPPC3-210ENST00000617904 C11orf72Q8NBR9 251 aa12.15□□□□□ -0.46
TRAPPC3-210ENST00000617904 RNASE8Q8TDE3 154 aaKnown RBP12.15□□□□□ -0.46
TRAPPC3-210ENST00000617904 TRGV1A0A0A0MS02 117 aa12.14□□□□□ -0.47
TRAPPC3-210ENST00000617904 SPRY2O43597 315 aa12.14□□□□□ -0.47
TRAPPC3-210ENST00000617904 AZU1P20160 251 aa12.14□□□□□ -0.47
TRAPPC3-210ENST00000617904 IFI27P40305 119 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC3-210ENST00000617904 SUMO2P61956 95 aaKnown RBP12.14□□□□□ -0.47
TRAPPC3-210ENST00000617904 ZFP2Q6ZN57 461 aa12.14□□□□□ -0.47
TRAPPC3-210ENST00000617904 CSNK1G2-AS1Q8NCQ2 148 aa12.14□□□□□ -0.47
TRAPPC3-210ENST00000617904 RASL10AQ92737 203 aa12.14□□□□□ -0.47
TRAPPC3-210ENST00000617904 KIF25-AS1Q9Y6Z4 181 aa12.14□□□□□ -0.47
TRAPPC3-210ENST00000617904 AGRNO00468 2067 aa12.14□□□□□ -0.47
TRAPPC3-210ENST00000617904 LEPROTL1O95214 131 aa12.13□□□□□ -0.47
TRAPPC3-210ENST00000617904 ORMDL2Q53FV1 153 aa12.13□□□□□ -0.47
TRAPPC3-210ENST00000617904 OR4C5Q8NGB2 326 aa12.13□□□□□ -0.47
TRAPPC3-210ENST00000617904 TRAV26-2A0A0B4J265 109 aa12.12□□□□□ -0.47
TRAPPC3-210ENST00000617904 IFITM10A6NMD0 228 aa12.12□□□□□ -0.47
TRAPPC3-210ENST00000617904 NUPR1O60356 82 aa12.12□□□□□ -0.47
TRAPPC3-210ENST00000617904 HBDP02042 147 aa12.12□□□□□ -0.47
TRAPPC3-210ENST00000617904 CRYGDP07320 174 aa12.12□□□□□ -0.47
TRAPPC3-210ENST00000617904 GIG44P09565 113 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC3-210ENST00000617904 LINC00310P59036 64 aa12.12□□□□□ -0.47
TRAPPC3-210ENST00000617904 RPL32P62910 135 aaKnown RBP12.12□□□□□ -0.47
TRAPPC3-210ENST00000617904 SUMO4Q6EEV6 95 aa12.12□□□□□ -0.47
TRAPPC3-210ENST00000617904 NRACQ8N912 160 aa12.12□□□□□ -0.47
TRAPPC3-210ENST00000617904 SMIM2Q9BVW6 85 aa12.12□□□□□ -0.47
TRAPPC3-210ENST00000617904 MRPL16Q9NX20 251 aaKnown RBP12.12□□□□□ -0.47
TRAPPC3-210ENST00000617904 COL7A1Q02388 2944 aa12.12□□□□□ -0.47
TRAPPC3-210ENST00000617904 C20orf202A1L168 122 aa12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 VCYO14598 125 aa12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 RS1O15537 224 aa12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 S100A12P80511 92 aa12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 LAGE3Q14657 143 aa12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 FAM19A2Q8N3H0 131 aa12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 IL17DQ8TAD2 202 aa12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 KIR2DL4Q99706 377 aa12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 B9D2Q9BPU9 175 aa12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 MAP1LC3CQ9BXW4 147 aa12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 EDA2RQ9HAV5 297 aa12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 NIT2Q9NQR4 276 aa12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 NBEAL2Q6ZNJ1 2754 aa12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 IGHV1-24A0A0C4DH33 117 aa12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 TRBV6-5A0A0K0K1A5 114 aa12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 SCGB1D1O95968 90 aa12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 IGHV4-30-4P0DP06 118 aa12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 JOSD1Q15040 202 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms