RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 HINT1P49773 126 aaPredicted RBP11.59□□□□□ -0.55
NR1H3-235ENST00000616973 SUMO4Q6EEV6 95 aa11.59□□□□□ -0.55
NR1H3-235ENST00000616973 SORL1Q92673 2214 aa11.59□□□□□ -0.55
NR1H3-235ENST00000616973 RBMY1BA6NDE4 496 aaKnown RBP11.58□□□□□ -0.55
NR1H3-235ENST00000616973 RBMY1EA6NEQ0 496 aaKnown RBP11.58□□□□□ -0.55
NR1H3-235ENST00000616973 CCL24O00175 119 aa11.58□□□□□ -0.55
NR1H3-235ENST00000616973 RBMY1DP0C7P1 496 aaKnown RBP11.58□□□□□ -0.55
NR1H3-235ENST00000616973 FGF6P10767 208 aa11.58□□□□□ -0.55
NR1H3-235ENST00000616973 LINC01006Q8NI28 216 aa11.58□□□□□ -0.55
NR1H3-235ENST00000616973 CLUHP3Q96NS8 147 aa11.58□□□□□ -0.55
NR1H3-235ENST00000616973 TP73-AS1Q9UF72 201 aa11.58□□□□□ -0.55
NR1H3-235ENST00000616973 TRBV6-5A0A0K0K1A5 114 aa11.58□□□□□ -0.56
NR1H3-235ENST00000616973 DLEU1O43261 78 aa11.58□□□□□ -0.56
NR1H3-235ENST00000616973 IGKCP01834 107 aa11.58□□□□□ -0.56
NR1H3-235ENST00000616973 RBMY1A1P0DJD3 496 aaKnown RBP11.58□□□□□ -0.56
NR1H3-235ENST00000616973 RBMY1CP0DJD4 496 aa11.58□□□□□ -0.56
NR1H3-235ENST00000616973 POLR2KP53803 58 aaKnown RBP11.58□□□□□ -0.56
NR1H3-235ENST00000616973 RBMY1FQ15415 496 aaKnown RBP11.58□□□□□ -0.56
NR1H3-235ENST00000616973 CD300EQ496F6 205 aaPredicted RBP11.58□□□□□ -0.56
NR1H3-235ENST00000616973 CSTL1Q9H114 145 aa11.58□□□□□ -0.56
NR1H3-235ENST00000616973 ZNF256Q9Y2P7 627 aaPredicted RBP11.58□□□□□ -0.56
NR1H3-235ENST00000616973 TSSC4Q9Y5U2 329 aaPredicted RBP11.58□□□□□ -0.56
NR1H3-235ENST00000616973 A0A087WWL8 130 aa11.57□□□□□ -0.56
NR1H3-235ENST00000616973 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.57□□□□□ -0.56
NR1H3-235ENST00000616973 CRYGDP07320 174 aa11.57□□□□□ -0.56
NR1H3-235ENST00000616973 G0S2P27469 103 aa11.57□□□□□ -0.56
NR1H3-235ENST00000616973 BOD1L2Q8IYS8 172 aa11.57□□□□□ -0.56
NR1H3-235ENST00000616973 HHLA3Q9XRX5 114 aa11.57□□□□□ -0.56
NR1H3-235ENST00000616973 A0A087WX48 190 aa11.56□□□□□ -0.56
NR1H3-235ENST00000616973 TRAV12-1A0A0B4J245 112 aa11.56□□□□□ -0.56
NR1H3-235ENST00000616973 LINC01549A6NIU2 74 aa11.56□□□□□ -0.56
NR1H3-235ENST00000616973 DPM2O94777 84 aa11.56□□□□□ -0.56
NR1H3-235ENST00000616973 ZNF418Q8TF45 676 aaPredicted RBP11.56□□□□□ -0.56
NR1H3-235ENST00000616973 LINC00467Q9BRT7 94 aa11.56□□□□□ -0.56
NR1H3-235ENST00000616973 CBY3A6NI87 242 aa11.56□□□□□ -0.56
NR1H3-235ENST00000616973 HILS1P60008 231 aa11.56□□□□□ -0.56
NR1H3-235ENST00000616973 HIST2H2BDQ6DRA6 164 aa11.56□□□□□ -0.56
NR1H3-235ENST00000616973 C12orf54Q6X4T0 127 aa11.56□□□□□ -0.56
NR1H3-235ENST00000616973 C2orf91Q6ZV80 131 aa11.56□□□□□ -0.56
NR1H3-235ENST00000616973 CITED2Q99967 270 aaPredicted RBP11.56□□□□□ -0.56
NR1H3-235ENST00000616973 FLNAP21333 2647 aaKnown RBP11.55□□□□□ -0.56
NR1H3-235ENST00000616973 F5H697 171 aa11.55□□□□□ -0.56
NR1H3-235ENST00000616973 VCYO14598 125 aa11.55□□□□□ -0.56
NR1H3-235ENST00000616973 SCGB3A1Q96QR1 104 aa11.55□□□□□ -0.56
NR1H3-235ENST00000616973 A0A1W2PRX2 142 aa11.54□□□□□ -0.56
NR1H3-235ENST00000616973 SIVA1O15304 175 aa11.54□□□□□ -0.56
NR1H3-235ENST00000616973 ZNF876PQ49A33 203 aa11.54□□□□□ -0.56
NR1H3-235ENST00000616973 MPV17L2Q567V2 206 aa11.54□□□□□ -0.56
NR1H3-235ENST00000616973 PIK3CD-AS1Q5SR53 167 aa11.54□□□□□ -0.56
NR1H3-235ENST00000616973 C2orf66Q6UXQ4 117 aa11.54□□□□□ -0.56
NR1H3-235ENST00000616973 TLN2Q9Y4G6 2542 aa11.54□□□□□ -0.56
NR1H3-235ENST00000616973 NDUFA7O95182 113 aa11.54□□□□□ -0.56
NR1H3-235ENST00000616973 C11orf44Q8N8P7 122 aa11.54□□□□□ -0.56
NR1H3-235ENST00000616973 PTH2Q96A98 100 aa11.54□□□□□ -0.56
NR1H3-235ENST00000616973 ITPR2Q14571 2701 aa11.54□□□□□ -0.56
NR1H3-235ENST00000616973 TRBV27A0A0K0K1C4 114 aa11.53□□□□□ -0.56
NR1H3-235ENST00000616973 M0QY20 66 aa11.53□□□□□ -0.56
NR1H3-235ENST00000616973 ZNF25P17030 456 aaPredicted RBP11.53□□□□□ -0.56
NR1H3-235ENST00000616973 BVES-AS1Q5T3Y7 98 aa11.53□□□□□ -0.56
NR1H3-235ENST00000616973 FAM74A4Q5TZK3 123 aa11.53□□□□□ -0.56
NR1H3-235ENST00000616973 ERASQ7Z444 233 aa11.53□□□□□ -0.56
NR1H3-235ENST00000616973 JMJD8Q96S16 334 aa11.53□□□□□ -0.56
NR1H3-235ENST00000616973 EDA2RQ9HAV5 297 aa11.53□□□□□ -0.56
NR1H3-235ENST00000616973 MRPL35Q9NZE8 188 aaKnown RBP11.53□□□□□ -0.56
NR1H3-235ENST00000616973 ZNF56Q15929 161 aa11.52□□□□□ -0.56
NR1H3-235ENST00000616973 ODF3L2Q3SX64 289 aa11.52□□□□□ -0.56
NR1H3-235ENST00000616973 TRPT1Q86TN4 253 aaKnown RBP11.52□□□□□ -0.56
NR1H3-235ENST00000616973 NEXN-AS1Q8NBZ9 246 aa11.52□□□□□ -0.56
NR1H3-235ENST00000616973 KIR2DL4Q99706 377 aa11.52□□□□□ -0.56
NR1H3-235ENST00000616973 SONP18583 2426 aaKnown RBP11.52□□□□□ -0.57
NR1H3-235ENST00000616973 SDHAF1A6NFY7 115 aa11.52□□□□□ -0.57
NR1H3-235ENST00000616973 H7C1H1 209 aa11.52□□□□□ -0.57
NR1H3-235ENST00000616973 PLNP26678 52 aa11.52□□□□□ -0.57
NR1H3-235ENST00000616973 ZFP2Q6ZN57 461 aa11.52□□□□□ -0.57
NR1H3-235ENST00000616973 F8VRH5 84 aa11.51□□□□□ -0.57
NR1H3-235ENST00000616973 RIPPLY3P57055 190 aa11.51□□□□□ -0.57
NR1H3-235ENST00000616973 ZNF415Q09FC8 603 aa11.51□□□□□ -0.57
NR1H3-235ENST00000616973 MORN3Q6PF18 240 aaPredicted RBP11.51□□□□□ -0.57
NR1H3-235ENST00000616973 TMEM208Q9BTX3 173 aa11.51□□□□□ -0.57
NR1H3-235ENST00000616973 CYSLTR1Q9Y271 337 aa11.51□□□□□ -0.57
NR1H3-235ENST00000616973 NMUP48645 174 aa11.5□□□□□ -0.57
NR1H3-235ENST00000616973 CCDC168Q8NDH2 2452 aa11.5□□□□□ -0.57
NR1H3-235ENST00000616973 MYO9AB2RTY4 2548 aa11.5□□□□□ -0.57
NR1H3-235ENST00000616973 M0R2P5 195 aa11.5□□□□□ -0.57
NR1H3-235ENST00000616973 INSP01308 110 aa11.5□□□□□ -0.57
NR1H3-235ENST00000616973 ZC2HC1BQ5TFG8 222 aa11.5□□□□□ -0.57
NR1H3-235ENST00000616973 NEGR1Q7Z3B1 354 aa11.5□□□□□ -0.57
NR1H3-235ENST00000616973 HECTD1Q9ULT8 2610 aa11.5□□□□□ -0.57
NR1H3-235ENST00000616973 CMC4P56277 68 aaPredicted RBP11.49□□□□□ -0.57
NR1H3-235ENST00000616973 PCP2Q8IVA1 136 aa11.49□□□□□ -0.57
NR1H3-235ENST00000616973 BAALCQ8WXS3 180 aa11.49□□□□□ -0.57
NR1H3-235ENST00000616973 CHTOPQ9Y3Y2 248 aaKnown RBP11.49□□□□□ -0.57
NR1H3-235ENST00000616973 IGKV2D-26A0A0A0MRZ7 120 aa11.48□□□□□ -0.57
NR1H3-235ENST00000616973 A8MWV9 139 aa11.48□□□□□ -0.57
NR1H3-235ENST00000616973 OR11H12B2RN74 326 aa11.48□□□□□ -0.57
NR1H3-235ENST00000616973 SPXQ9BT56 116 aa11.48□□□□□ -0.57
NR1H3-235ENST00000616973 NACAE9PAV3 2078 aa11.48□□□□□ -0.57
NR1H3-235ENST00000616973 HTN1P15515 57 aa11.48□□□□□ -0.57
NR1H3-235ENST00000616973 PROK1P58294 105 aa11.48□□□□□ -0.57
NR1H3-235ENST00000616973 RHOHQ15669 191 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms