RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 ABCA4P78363 2273 aa16.22■□□□□ 0.19
SH3D19-211ENST00000604030 C20orf203Q8NBC4 194 aa16.22■□□□□ 0.19
SH3D19-211ENST00000604030 J3KT08 172 aa16.21■□□□□ 0.19
SH3D19-211ENST00000604030 SS18L2Q9UHA2 77 aa16.21■□□□□ 0.19
SH3D19-211ENST00000604030 CACNA1HO95180 2353 aa16.21■□□□□ 0.19
SH3D19-211ENST00000604030 LGALS9O00182 355 aa16.21■□□□□ 0.19
SH3D19-211ENST00000604030 MRAPQ8TCY5 172 aa16.21■□□□□ 0.19
SH3D19-211ENST00000604030 ETDCA0A1B0GVM5 59 aa16.21■□□□□ 0.19
SH3D19-211ENST00000604030 CLPSL2Q6UWE3 100 aa16.21■□□□□ 0.18
SH3D19-211ENST00000604030 IGHV4-61A0A0C4DH41 118 aa16.2■□□□□ 0.18
SH3D19-211ENST00000604030 TRBV10-1A0A0K0K1A3 114 aa16.2■□□□□ 0.18
SH3D19-211ENST00000604030 A0A1B0GX51 115 aa16.2■□□□□ 0.18
SH3D19-211ENST00000604030 PSMB8P28062 276 aa16.2■□□□□ 0.18
SH3D19-211ENST00000604030 SPRY4Q9C004 299 aa16.2■□□□□ 0.18
SH3D19-211ENST00000604030 FAM236AA0A1B0GUQ0 79 aa16.19■□□□□ 0.18
SH3D19-211ENST00000604030 FAM236BA0A1B0GV22 79 aa16.19■□□□□ 0.18
SH3D19-211ENST00000604030 GYPEP15421 78 aa16.19■□□□□ 0.18
SH3D19-211ENST00000604030 RPL39P62891 51 aaKnown RBP16.19■□□□□ 0.18
SH3D19-211ENST00000604030 C10orf105Q8TEF2 133 aa16.19■□□□□ 0.18
SH3D19-211ENST00000604030 IGKV1D-37A0A075B6S9 117 aa16.19■□□□□ 0.18
SH3D19-211ENST00000604030 CAMK2N2Q96S95 79 aa16.19■□□□□ 0.18
SH3D19-211ENST00000604030 MRPL36Q9P0J6 103 aaKnown RBP16.19■□□□□ 0.18
SH3D19-211ENST00000604030 DAZAP2Q15038 168 aaPredicted RBP16.19■□□□□ 0.18
SH3D19-211ENST00000604030 ODF3Q96PU9 254 aa16.19■□□□□ 0.18
SH3D19-211ENST00000604030 IGKV2D-24A0A075B6R9 120 aa16.19■□□□□ 0.18
SH3D19-211ENST00000604030 A0A096LPF7 62 aa16.19■□□□□ 0.18
SH3D19-211ENST00000604030 IGLV2-8P01709 118 aa16.19■□□□□ 0.18
SH3D19-211ENST00000604030 SPART-AS1P0CW21 52 aa16.19■□□□□ 0.18
SH3D19-211ENST00000604030 MDFICQ9P1T7 246 aa16.18■□□□□ 0.18
SH3D19-211ENST00000604030 FBXL19-AS1Q494R0 122 aa16.18■□□□□ 0.18
SH3D19-211ENST00000604030 DOCK10Q96BY6 2186 aa16.18■□□□□ 0.18
SH3D19-211ENST00000604030 DENND4CQ5VZ89 1909 aa16.18■□□□□ 0.18
SH3D19-211ENST00000604030 CGB3P0DN86 165 aa16.18■□□□□ 0.18
SH3D19-211ENST00000604030 CGB7P0DN87 165 aa16.18■□□□□ 0.18
SH3D19-211ENST00000604030 SLURP1P55000 103 aa16.18■□□□□ 0.18
SH3D19-211ENST00000604030 Q8N7P7 452 aa16.17■□□□□ 0.18
SH3D19-211ENST00000604030 CACNA1GO43497 2377 aa16.17■□□□□ 0.18
SH3D19-211ENST00000604030 NDUFA11Q86Y39 141 aa16.17■□□□□ 0.18
SH3D19-211ENST00000604030 WT1P19544 449 aaPredicted RBP16.17■□□□□ 0.18
SH3D19-211ENST00000604030 IGHV4-38-2P0DP08 117 aa16.16■□□□□ 0.18
SH3D19-211ENST00000604030 FANCD2OSQ96PS1 177 aa16.16■□□□□ 0.18
SH3D19-211ENST00000604030 MLST8Q9BVC4 326 aa16.16■□□□□ 0.18
SH3D19-211ENST00000604030 SPRY2O43597 315 aa16.16■□□□□ 0.18
SH3D19-211ENST00000604030 Q6ZQT7 251 aa16.16■□□□□ 0.18
SH3D19-211ENST00000604030 LINC00643Q86TS7 51 aa16.16■□□□□ 0.18
SH3D19-211ENST00000604030 TTTY13Q9BZ97 58 aa16.16■□□□□ 0.18
SH3D19-211ENST00000604030 APRG1Q8IVJ8 170 aa16.16■□□□□ 0.18
SH3D19-211ENST00000604030 GTF3C1Q12789 2109 aa16.16■□□□□ 0.18
SH3D19-211ENST00000604030 BLCAPP62952 87 aa16.15■□□□□ 0.18
SH3D19-211ENST00000604030 NOTCH4Q99466 2003 aa16.15■□□□□ 0.18
SH3D19-211ENST00000604030 A0A0J9YY99 117 aa16.15■□□□□ 0.18
SH3D19-211ENST00000604030 GRNP28799 593 aaKnown RBP16.15■□□□□ 0.18
SH3D19-211ENST00000604030 UBE2BP63146 152 aa16.15■□□□□ 0.18
SH3D19-211ENST00000604030 MBD6Q96DN6 1003 aa16.15■□□□□ 0.18
SH3D19-211ENST00000604030 E7EUB6 86 aa16.14■□□□□ 0.17
SH3D19-211ENST00000604030 NDUFA1O15239 70 aa16.14■□□□□ 0.17
SH3D19-211ENST00000604030 NDUFC2O95298 119 aa16.14■□□□□ 0.17
SH3D19-211ENST00000604030 FSTL3O95633 263 aa16.14■□□□□ 0.17
SH3D19-211ENST00000604030 IGLC6P0CF74 106 aa16.14■□□□□ 0.17
SH3D19-211ENST00000604030 MP68P56378 58 aa16.14■□□□□ 0.17
SH3D19-211ENST00000604030 SIRPDQ9H106 197 aa16.14■□□□□ 0.17
SH3D19-211ENST00000604030 TMEM256-PLSCR3K7ERE1 68 aa16.14■□□□□ 0.17
SH3D19-211ENST00000604030 NCKAP5O14513 1909 aa16.14■□□□□ 0.17
SH3D19-211ENST00000604030 A0A0J9YX75 114 aa16.14■□□□□ 0.17
SH3D19-211ENST00000604030 FRMD6-AS1P0C7T7 363 aa16.14■□□□□ 0.17
SH3D19-211ENST00000604030 COL4A3Q01955 1670 aa16.14■□□□□ 0.17
SH3D19-211ENST00000604030 NREPQ16612 68 aa16.13■□□□□ 0.17
SH3D19-211ENST00000604030 MIAQ16674 131 aa16.13■□□□□ 0.17
SH3D19-211ENST00000604030 DEFB113Q30KQ7 82 aa16.13■□□□□ 0.17
SH3D19-211ENST00000604030 SEM1Q6ZVN7 128 aa16.13■□□□□ 0.17
SH3D19-211ENST00000604030 ZMAT4Q9H898 229 aa16.12■□□□□ 0.17
SH3D19-211ENST00000604030 IGHV4OR15-8A0A075B7B6 117 aa16.12■□□□□ 0.17
SH3D19-211ENST00000604030 A0A087WW49 117 aa16.12■□□□□ 0.17
SH3D19-211ENST00000604030 TM2D2Q9BX73 214 aa16.12■□□□□ 0.17
SH3D19-211ENST00000604030 RS1O15537 224 aa16.12■□□□□ 0.17
SH3D19-211ENST00000604030 DEFB136Q30KP8 78 aa16.12■□□□□ 0.17
SH3D19-211ENST00000604030 J3QKU1 62 aa16.12■□□□□ 0.17
SH3D19-211ENST00000604030 IGHV3-30-3P0DP02 117 aa16.11■□□□□ 0.17
SH3D19-211ENST00000604030 IGHV4-30-2A0A087WSY4 118 aa16.11■□□□□ 0.17
SH3D19-211ENST00000604030 LECT2O14960 151 aa16.11■□□□□ 0.17
SH3D19-211ENST00000604030 TMEM61Q8N0U2 210 aa16.11■□□□□ 0.17
SH3D19-211ENST00000604030 NDUFB1O75438 58 aa16.1■□□□□ 0.17
SH3D19-211ENST00000604030 IGKV3D-7A0A0C4DH55 119 aa16.1■□□□□ 0.17
SH3D19-211ENST00000604030 MYCNOSP40205 109 aa16.1■□□□□ 0.17
SH3D19-211ENST00000604030 C4orf3Q8WVX3 66 aa16.09■□□□□ 0.17
SH3D19-211ENST00000604030 EIF4EBP1Q13541 118 aaPredicted RBP16.09■□□□□ 0.17
SH3D19-211ENST00000604030 ZNF295-AS1Q8N0V1 137 aa16.09■□□□□ 0.17
SH3D19-211ENST00000604030 YPEL4Q96NS1 127 aa16.09■□□□□ 0.17
SH3D19-211ENST00000604030 DIRC1Q969H9 104 aa16.09■□□□□ 0.17
SH3D19-211ENST00000604030 TMEM263Q8WUH6 116 aaKnown RBP16.08■□□□□ 0.16
SH3D19-211ENST00000604030 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.08■□□□□ 0.165e-7■■■■□ 23.4
SH3D19-211ENST00000604030 HHLA3Q9XRX5 114 aa16.08■□□□□ 0.16
SH3D19-211ENST00000604030 MED13Q9UHV7 2174 aa16.08■□□□□ 0.16
SH3D19-211ENST00000604030 CITED2Q99967 270 aaPredicted RBP16.08■□□□□ 0.16
SH3D19-211ENST00000604030 SPANXB1Q9NS25 103 aaPredicted RBP16.08■□□□□ 0.16
SH3D19-211ENST00000604030 ODF3BA8MYP8 253 aa16.07■□□□□ 0.16
SH3D19-211ENST00000604030 DEFB105AQ8NG35 78 aa16.07■□□□□ 0.16
SH3D19-211ENST00000604030 BRWD1-AS2P59051 145 aa16.07■□□□□ 0.16
SH3D19-211ENST00000604030 A6NDX4 124 aa16.06■□□□□ 0.16
SH3D19-211ENST00000604030 PROP1O75360 226 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms