RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 CSMD3Q7Z407 3707 aa8.36□□□□□ -1.07
ZNF548-211ENST00000600927 CBY3A6NI87 242 aa8.36□□□□□ -1.07
ZNF548-211ENST00000600927 D6R8Y8 96 aa8.36□□□□□ -1.07
ZNF548-211ENST00000600927 NUPR1O60356 82 aa8.36□□□□□ -1.07
ZNF548-211ENST00000600927 SMIM17P0DL12 118 aa8.36□□□□□ -1.07
ZNF548-211ENST00000600927 ZNF415Q09FC8 603 aa8.36□□□□□ -1.07
ZNF548-211ENST00000600927 LINC01587Q99440 93 aa8.36□□□□□ -1.07
ZNF548-211ENST00000600927 MDFICQ9P1T7 246 aa8.36□□□□□ -1.07
ZNF548-211ENST00000600927 AGRNO00468 2067 aa8.36□□□□□ -1.07
ZNF548-211ENST00000600927 MUC21A0A0G2JKD1 596 aa8.35□□□□□ -1.07
ZNF548-211ENST00000600927 MUC21A0A140T8X8 626 aa8.35□□□□□ -1.07
ZNF548-211ENST00000600927 LINC01546A6NGU7 62 aa8.35□□□□□ -1.07
ZNF548-211ENST00000600927 K7EMI3 77 aa8.35□□□□□ -1.07
ZNF548-211ENST00000600927 HSBP1O75506 76 aa8.35□□□□□ -1.07
ZNF548-211ENST00000600927 RBMY1A1P0DJD3 496 aaKnown RBP8.35□□□□□ -1.07
ZNF548-211ENST00000600927 RBMY1CP0DJD4 496 aa8.35□□□□□ -1.07
ZNF548-211ENST00000600927 RBMY1FQ15415 496 aaKnown RBP8.35□□□□□ -1.07
ZNF548-211ENST00000600927 LINC00518Q8N0U6 118 aa8.35□□□□□ -1.07
ZNF548-211ENST00000600927 OR10D4PQ8NGN7 298 aa8.35□□□□□ -1.07
ZNF548-211ENST00000600927 SAMD10Q9BYL1 202 aa8.35□□□□□ -1.07
ZNF548-211ENST00000600927 ZMAT4Q9H898 229 aa8.35□□□□□ -1.07
ZNF548-211ENST00000600927 EDA2RQ9HAV5 297 aa8.35□□□□□ -1.07
ZNF548-211ENST00000600927 NXT2Q9NPJ8 142 aaKnown RBP8.35□□□□□ -1.07
ZNF548-211ENST00000600927 GOLT1BQ9Y3E0 138 aa8.35□□□□□ -1.07
ZNF548-211ENST00000600927 KIF25-AS1Q9Y6Z4 181 aa8.35□□□□□ -1.07
ZNF548-211ENST00000600927 RYR3Q15413 4870 aa8.35□□□□□ -1.07
ZNF548-211ENST00000600927 KIR2DL5BA0A0G2JN68 375 aa8.34□□□□□ -1.07
ZNF548-211ENST00000600927 KIR2DL5BA0A0G2JPC4 375 aa8.34□□□□□ -1.07
ZNF548-211ENST00000600927 M0R2P5 195 aa8.34□□□□□ -1.07
ZNF548-211ENST00000600927 FXYD7P58549 80 aa8.34□□□□□ -1.07
ZNF548-211ENST00000600927 SSTP61278 116 aa8.34□□□□□ -1.07
ZNF548-211ENST00000600927 RPL32P62910 135 aaKnown RBP8.34□□□□□ -1.07
ZNF548-211ENST00000600927 JOSD1Q15040 202 aaPredicted RBP8.34□□□□□ -1.07
ZNF548-211ENST00000600927 PDZD11Q5EBL8 140 aa8.34□□□□□ -1.07
ZNF548-211ENST00000600927 KIR2DL5AQ8N109 375 aa8.34□□□□□ -1.07
ZNF548-211ENST00000600927 C1orf158Q8N1D5 194 aa8.34□□□□□ -1.07
ZNF548-211ENST00000600927 KIR2DL5BQ8NHK3 375 aa8.34□□□□□ -1.07
ZNF548-211ENST00000600927 PRSS3P2Q8NHM4 247 aa8.34□□□□□ -1.07
ZNF548-211ENST00000600927 SPATA25Q9BR10 227 aa8.34□□□□□ -1.07
ZNF548-211ENST00000600927 C20orf78Q9BR46 151 aa8.34□□□□□ -1.07
ZNF548-211ENST00000600927 MAP1LC3AQ9H492 121 aa8.34□□□□□ -1.07
ZNF548-211ENST00000600927 AP5S1Q9NUS5 200 aa8.34□□□□□ -1.07
ZNF548-211ENST00000600927 NBEAL2Q6ZNJ1 2754 aa8.33□□□□□ -1.08
ZNF548-211ENST00000600927 A8MWV9 139 aa8.33□□□□□ -1.08
ZNF548-211ENST00000600927 CIDEAO60543 219 aa8.33□□□□□ -1.08
ZNF548-211ENST00000600927 TNFRSF6BO95407 300 aa8.33□□□□□ -1.08
ZNF548-211ENST00000600927 AMTP48728 403 aa8.33□□□□□ -1.08
ZNF548-211ENST00000600927 LINC00315P59091 139 aa8.33□□□□□ -1.08
ZNF548-211ENST00000600927 IQCJQ1A5X6 159 aa8.33□□□□□ -1.08
ZNF548-211ENST00000600927 FA2HQ7L5A8 372 aa8.33□□□□□ -1.08
ZNF548-211ENST00000600927 C11orf72Q8NBR9 251 aa8.33□□□□□ -1.08
ZNF548-211ENST00000600927 CSNK1G2-AS1Q8NCQ2 148 aa8.33□□□□□ -1.08
ZNF548-211ENST00000600927 URB1-AS1Q96HZ7 61 aa8.33□□□□□ -1.08
ZNF548-211ENST00000600927 TMEM208Q9BTX3 173 aa8.33□□□□□ -1.08
ZNF548-211ENST00000600927 CSTL1Q9H114 145 aa8.33□□□□□ -1.08
ZNF548-211ENST00000600927 XCL2Q9UBD3 114 aa8.33□□□□□ -1.08
ZNF548-211ENST00000600927 TIMM8BQ9Y5J9 83 aaPredicted RBP8.33□□□□□ -1.08
ZNF548-211ENST00000600927 DYNC2H1Q8NCM8 4307 aaKnown RBP8.33□□□□□ -1.08
ZNF548-211ENST00000600927 GIG44P09565 113 aaPredicted RBP8.32□□□□□ -1.08
ZNF548-211ENST00000600927 LGALS9BQ3B8N2 356 aa8.32□□□□□ -1.08
ZNF548-211ENST00000600927 ZNF876PQ49A33 203 aa8.32□□□□□ -1.08
ZNF548-211ENST00000600927 ZNF705AQ6ZN79 300 aaPredicted RBP8.32□□□□□ -1.08
ZNF548-211ENST00000600927 C14orf178Q8N769 122 aaPredicted RBP8.32□□□□□ -1.08
ZNF548-211ENST00000600927 NRACQ8N912 160 aa8.32□□□□□ -1.08
ZNF548-211ENST00000600927 TMEM263Q8WUH6 116 aaKnown RBP8.32□□□□□ -1.08
ZNF548-211ENST00000600927 RASL10AQ92737 203 aa8.32□□□□□ -1.08
ZNF548-211ENST00000600927 SMIM9A6NGZ8 99 aa8.31□□□□□ -1.08
ZNF548-211ENST00000600927 LINC01549A6NIU2 74 aa8.31□□□□□ -1.08
ZNF548-211ENST00000600927 RHODO00212 210 aa8.31□□□□□ -1.08
ZNF548-211ENST00000600927 NPYP01303 97 aa8.31□□□□□ -1.08
ZNF548-211ENST00000600927 CRYGDP07320 174 aa8.31□□□□□ -1.08
ZNF548-211ENST00000600927 DAZ2Q13117 558 aaKnown RBP8.31□□□□□ -1.08
ZNF548-211ENST00000600927 RNASEKQ6P5S7 137 aaKnown RBP8.31□□□□□ -1.08
ZNF548-211ENST00000600927 Q8N8P6 123 aa8.31□□□□□ -1.08
ZNF548-211ENST00000600927 IL17DQ8TAD2 202 aa8.31□□□□□ -1.08
ZNF548-211ENST00000600927 RETNQ9HD89 108 aa8.31□□□□□ -1.08
ZNF548-211ENST00000600927 TRBV6-5A0A0K0K1A5 114 aa8.3□□□□□ -1.08
ZNF548-211ENST00000600927 H7C1H1 209 aa8.3□□□□□ -1.08
ZNF548-211ENST00000600927 G0S2P27469 103 aa8.3□□□□□ -1.08
ZNF548-211ENST00000600927 IFI27P40305 119 aaPredicted RBP8.3□□□□□ -1.08
ZNF548-211ENST00000600927 PYY3Q5JQD4 70 aa8.3□□□□□ -1.08
ZNF548-211ENST00000600927 ZFP2Q6ZN57 461 aa8.3□□□□□ -1.08
ZNF548-211ENST00000600927 RNASE8Q8TDE3 154 aaKnown RBP8.3□□□□□ -1.08
ZNF548-211ENST00000600927 C16orf74Q96GX8 76 aa8.3□□□□□ -1.08
ZNF548-211ENST00000600927 LYSTQ99698 3801 aa8.29□□□□□ -1.08
ZNF548-211ENST00000600927 IGLV2-18A0A075B6J9 118 aa8.29□□□□□ -1.08
ZNF548-211ENST00000600927 TCAPO15273 167 aa8.29□□□□□ -1.08
ZNF548-211ENST00000600927 APOC4P55056 127 aa8.29□□□□□ -1.08
ZNF548-211ENST00000600927 C12orf57Q99622 126 aa8.29□□□□□ -1.08
ZNF548-211ENST00000600927 OVOL2Q9BRP0 275 aa8.29□□□□□ -1.08
ZNF548-211ENST00000600927 HSPB8Q9UJY1 196 aa8.29□□□□□ -1.08
ZNF548-211ENST00000600927 MUC4Q99102 2169 aa8.29□□□□□ -1.08
ZNF548-211ENST00000600927 SACSQ9NZJ4 4579 aa8.29□□□□□ -1.08
ZNF548-211ENST00000600927 SMKR1H3BMG3 65 aa8.28□□□□□ -1.08
ZNF548-211ENST00000600927 C3orf84H3BNL1 204 aa8.28□□□□□ -1.08
ZNF548-211ENST00000600927 RS1O15537 224 aa8.28□□□□□ -1.08
ZNF548-211ENST00000600927 LEPROTL1O95214 131 aa8.28□□□□□ -1.08
ZNF548-211ENST00000600927 RPL35AP18077 110 aaKnown RBP8.28□□□□□ -1.08
ZNF548-211ENST00000600927 SUMO2P61956 95 aaKnown RBP8.28□□□□□ -1.08
ZNF548-211ENST00000600927 RRN3P1Q2M238 152 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms