RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 WFDC2Q14508 124 aa9.43□□□□□ -0.9
USHBP1-207ENST00000597928 ZNF625Q96I27 306 aaPredicted RBP9.43□□□□□ -0.9
USHBP1-207ENST00000597928 SDHAF1A6NFY7 115 aa9.42□□□□□ -0.9
USHBP1-207ENST00000597928 OVOL1O14753 267 aa9.42□□□□□ -0.9
USHBP1-207ENST00000597928 LGALS3P17931 250 aaKnown RBP9.42□□□□□ -0.9
USHBP1-207ENST00000597928 DEFB131AP59861 70 aa9.42□□□□□ -0.9
USHBP1-207ENST00000597928 HERVK_113P61574 105 aa9.42□□□□□ -0.9
USHBP1-207ENST00000597928 SPXQ9BT56 116 aa9.42□□□□□ -0.9
USHBP1-207ENST00000597928 NF1P21359 2839 aa9.42□□□□□ -0.9
USHBP1-207ENST00000597928 LINC01549A6NIU2 74 aa9.42□□□□□ -0.9
USHBP1-207ENST00000597928 H3BRM9 83 aa9.42□□□□□ -0.9
USHBP1-207ENST00000597928 FBXL19-AS1Q494R0 122 aa9.42□□□□□ -0.9
USHBP1-207ENST00000597928 GATD1Q8NB37 220 aa9.42□□□□□ -0.9
USHBP1-207ENST00000597928 TEX48A0A1B0GUV7 120 aa9.42□□□□□ -0.9
USHBP1-207ENST00000597928 LINC01559Q495D7 138 aa9.42□□□□□ -0.9
USHBP1-207ENST00000597928 ORMDL2Q53FV1 153 aa9.42□□□□□ -0.9
USHBP1-207ENST00000597928 FBN2P35556 2912 aa9.41□□□□□ -0.9
USHBP1-207ENST00000597928 P0DMU3 169 aa9.41□□□□□ -0.9
USHBP1-207ENST00000597928 FAM231AP0DMU4 169 aa9.41□□□□□ -0.9
USHBP1-207ENST00000597928 FAM231CP0DMU5 169 aa9.41□□□□□ -0.9
USHBP1-207ENST00000597928 CDKN1BP46527 198 aa9.41□□□□□ -0.9
USHBP1-207ENST00000597928 CEMP1Q6PRD7 247 aaPredicted RBP9.41□□□□□ -0.9
USHBP1-207ENST00000597928 Q8N6K4 173 aa9.41□□□□□ -0.9
USHBP1-207ENST00000597928 Q5PR19 223 aa9.41□□□□□ -0.9
USHBP1-207ENST00000597928 HOXA3O43365 443 aaPredicted RBP9.4□□□□□ -0.9
USHBP1-207ENST00000597928 LINC01587Q99440 93 aa9.4□□□□□ -0.9
USHBP1-207ENST00000597928 K7EP34 96 aa9.4□□□□□ -0.91
USHBP1-207ENST00000597928 IGHV7-4-1A0A0J9YVY3 117 aa9.39□□□□□ -0.91
USHBP1-207ENST00000597928 APRG1Q8IVJ8 170 aa9.39□□□□□ -0.91
USHBP1-207ENST00000597928 FAM223BA6NKX1 122 aa9.39□□□□□ -0.91
USHBP1-207ENST00000597928 F8VRH5 84 aa9.39□□□□□ -0.91
USHBP1-207ENST00000597928 FAM223AQ8IWN6 122 aa9.39□□□□□ -0.91
USHBP1-207ENST00000597928 A0A087WX48 190 aa9.39□□□□□ -0.91
USHBP1-207ENST00000597928 B4DSR2 109 aa9.39□□□□□ -0.91
USHBP1-207ENST00000597928 HIST2H2BCQ6DN03 193 aa9.39□□□□□ -0.91
USHBP1-207ENST00000597928 CEND1Q8N111 149 aa9.39□□□□□ -0.91
USHBP1-207ENST00000597928 RASL10AQ92737 203 aa9.39□□□□□ -0.91
USHBP1-207ENST00000597928 XCL2Q9UBD3 114 aa9.39□□□□□ -0.91
USHBP1-207ENST00000597928 COX6B1P14854 86 aa9.38□□□□□ -0.91
USHBP1-207ENST00000597928 SLURP1P55000 103 aa9.38□□□□□ -0.91
USHBP1-207ENST00000597928 CFHR3Q02985 330 aa9.38□□□□□ -0.91
USHBP1-207ENST00000597928 C12orf74Q32Q52 190 aa9.38□□□□□ -0.91
USHBP1-207ENST00000597928 FLNAP21333 2647 aaKnown RBP9.38□□□□□ -0.91
USHBP1-207ENST00000597928 J3QR89 54 aa9.38□□□□□ -0.91
USHBP1-207ENST00000597928 NDUFA4O00483 81 aa9.38□□□□□ -0.91
USHBP1-207ENST00000597928 CIDEAO60543 219 aa9.38□□□□□ -0.91
USHBP1-207ENST00000597928 PROK1P58294 105 aa9.38□□□□□ -0.91
USHBP1-207ENST00000597928 SYT8Q8NBV8 401 aa9.38□□□□□ -0.91
USHBP1-207ENST00000597928 PTH2Q96A98 100 aa9.38□□□□□ -0.91
USHBP1-207ENST00000597928 VCX2Q9H322 139 aa9.38□□□□□ -0.91
USHBP1-207ENST00000597928 SMPXQ9UHP9 88 aa9.38□□□□□ -0.91
USHBP1-207ENST00000597928 CSMD2Q7Z408 3487 aa9.38□□□□□ -0.91
USHBP1-207ENST00000597928 NBEAL2Q6ZNJ1 2754 aa9.37□□□□□ -0.91
USHBP1-207ENST00000597928 GAGE13Q4V321 117 aa9.37□□□□□ -0.91
USHBP1-207ENST00000597928 ZFAND2AQ8N6M9 145 aa9.37□□□□□ -0.91
USHBP1-207ENST00000597928 PLEKHB2Q96CS7 222 aa9.37□□□□□ -0.91
USHBP1-207ENST00000597928 TNFRSF18Q9Y5U5 241 aa9.37□□□□□ -0.91
USHBP1-207ENST00000597928 PLNP26678 52 aa9.37□□□□□ -0.91
USHBP1-207ENST00000597928 TCTEX1D4Q5JR98 221 aa9.37□□□□□ -0.91
USHBP1-207ENST00000597928 SUMO4Q6EEV6 95 aa9.37□□□□□ -0.91
USHBP1-207ENST00000597928 C18orf65Q6ZTR6 163 aa9.37□□□□□ -0.91
USHBP1-207ENST00000597928 TSSC4Q9Y5U2 329 aaPredicted RBP9.37□□□□□ -0.91
USHBP1-207ENST00000597928 Q8N1Y9 231 aa9.37□□□□□ -0.91
USHBP1-207ENST00000597928 MYMXA0A1B0GTQ4 84 aa9.36□□□□□ -0.91
USHBP1-207ENST00000597928 CD28P10747 220 aa9.36□□□□□ -0.91
USHBP1-207ENST00000597928 BSNQ9UPA5 3926 aa9.36□□□□□ -0.91
USHBP1-207ENST00000597928 C9orf47Q6ZRZ4 202 aa9.36□□□□□ -0.91
USHBP1-207ENST00000597928 TRBV6-1A0A0K0K1D8 114 aa9.35□□□□□ -0.91
USHBP1-207ENST00000597928 C11orf86A6NJI1 115 aa9.35□□□□□ -0.91
USHBP1-207ENST00000597928 EBI3Q14213 229 aa9.35□□□□□ -0.91
USHBP1-207ENST00000597928 NRACQ8N912 160 aa9.35□□□□□ -0.91
USHBP1-207ENST00000597928 USMG5Q96IX5 58 aa9.35□□□□□ -0.91
USHBP1-207ENST00000597928 C10orf105Q8TEF2 133 aa9.35□□□□□ -0.91
USHBP1-207ENST00000597928 BAALCQ8WXS3 180 aa9.35□□□□□ -0.91
USHBP1-207ENST00000597928 PAX2Q02962 417 aa9.35□□□□□ -0.91
USHBP1-207ENST00000597928 HHLA3Q9XRX5 114 aa9.35□□□□□ -0.91
USHBP1-207ENST00000597928 U3KQK5 164 aa9.35□□□□□ -0.91
USHBP1-207ENST00000597928 IGHV4OR15-8A0A075B7B6 117 aa9.34□□□□□ -0.91
USHBP1-207ENST00000597928 A0A087WW49 117 aa9.34□□□□□ -0.91
USHBP1-207ENST00000597928 TMEM190Q8WZ59 177 aa9.34□□□□□ -0.91
USHBP1-207ENST00000597928 ITPR3Q14573 2671 aa9.34□□□□□ -0.91
USHBP1-207ENST00000597928 VCYO14598 125 aa9.34□□□□□ -0.91
USHBP1-207ENST00000597928 MRAP2Q96G30 205 aa9.34□□□□□ -0.91
USHBP1-207ENST00000597928 A0A0J9YXV3 536 aa9.34□□□□□ -0.91
USHBP1-207ENST00000597928 A0A1B0GV72 72 aa9.34□□□□□ -0.91
USHBP1-207ENST00000597928 IGLL5B9A064 214 aa9.34□□□□□ -0.91
USHBP1-207ENST00000597928 HOXD3P31249 432 aaPredicted RBP9.34□□□□□ -0.91
USHBP1-207ENST00000597928 FLNBO75369 2602 aaKnown RBP9.33□□□□□ -0.92
USHBP1-207ENST00000597928 DAND5Q8N907 189 aa9.33□□□□□ -0.92
USHBP1-207ENST00000597928 PIFOQ8TCI5 191 aa9.33□□□□□ -0.92
USHBP1-207ENST00000597928 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.33□□□□□ -0.92
USHBP1-207ENST00000597928 TMEM238LA0A1B0GVL6 79 aa9.33□□□□□ -0.92
USHBP1-207ENST00000597928 IGKV2-29A2NJV5 120 aaPredicted RBP9.33□□□□□ -0.92
USHBP1-207ENST00000597928 A6NJY4 79 aa9.33□□□□□ -0.92
USHBP1-207ENST00000597928 ZNF48Q96MX3 618 aaPredicted RBP9.33□□□□□ -0.92
USHBP1-207ENST00000597928 ZFP2Q6ZN57 461 aa9.33□□□□□ -0.92
USHBP1-207ENST00000597928 OR5A1Q8NGJ0 315 aa9.33□□□□□ -0.92
USHBP1-207ENST00000597928 GEMIN7Q9H840 131 aaKnown RBP9.33□□□□□ -0.92
USHBP1-207ENST00000597928 RBAKDNA6NC62 111 aa9.32□□□□□ -0.92
USHBP1-207ENST00000597928 A8MZ25 164 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms