RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 PRSS3P2Q8NHM4 247 aa16.67■□□□□ 0.26
SPTBN4-210ENST00000596900 C16orf74Q96GX8 76 aa16.67■□□□□ 0.26
SPTBN4-210ENST00000596900 KIF25-AS1Q9Y6Z4 181 aa16.67■□□□□ 0.26
SPTBN4-210ENST00000596900 LINC00614P0C842 121 aa16.66■□□□□ 0.26
SPTBN4-210ENST00000596900 PACRGQ96M98 296 aaPredicted RBP16.66■□□□□ 0.26
SPTBN4-210ENST00000596900 NDUFAF3Q9BU61 184 aa16.66■□□□□ 0.26
SPTBN4-210ENST00000596900 MAP1LC3AQ9H492 121 aa16.66■□□□□ 0.26
SPTBN4-210ENST00000596900 TNFRSF6BO95407 300 aa16.65■□□□□ 0.26
SPTBN4-210ENST00000596900 AZU1P20160 251 aa16.65■□□□□ 0.26
SPTBN4-210ENST00000596900 EGFEM1PQ0D2K5 195 aa16.65■□□□□ 0.26
SPTBN4-210ENST00000596900 RRN3P1Q2M238 152 aa16.65■□□□□ 0.26
SPTBN4-210ENST00000596900 JPT2Q9H910 190 aa16.65■□□□□ 0.26
SPTBN4-210ENST00000596900 A8MWV9 139 aa16.65■□□□□ 0.26
SPTBN4-210ENST00000596900 PPP1R17O96001 155 aa16.65■□□□□ 0.26
SPTBN4-210ENST00000596900 FAM74A4Q5TZK3 123 aa16.65■□□□□ 0.26
SPTBN4-210ENST00000596900 POM121L12Q8N7R1 296 aa16.65■□□□□ 0.26
SPTBN4-210ENST00000596900 COL6A5A8TX70 2615 aa16.64■□□□□ 0.25
SPTBN4-210ENST00000596900 A0A087WWL8 130 aa16.64■□□□□ 0.25
SPTBN4-210ENST00000596900 TRAV26-2A0A0B4J265 109 aa16.64■□□□□ 0.25
SPTBN4-210ENST00000596900 AMTP48728 403 aa16.64■□□□□ 0.25
SPTBN4-210ENST00000596900 FA2HQ7L5A8 372 aa16.64■□□□□ 0.25
SPTBN4-210ENST00000596900 OR10D4PQ8NGN7 298 aa16.63■□□□□ 0.25
SPTBN4-210ENST00000596900 PMCHP20382 165 aa16.63■□□□□ 0.25
SPTBN4-210ENST00000596900 IL17DQ8TAD2 202 aa16.63■□□□□ 0.25
SPTBN4-210ENST00000596900 AP5S1Q9NUS5 200 aa16.63■□□□□ 0.25
SPTBN4-210ENST00000596900 LOC389332A0A1B0GUA5 103 aa16.62■□□□□ 0.25
SPTBN4-210ENST00000596900 F5H697 171 aa16.62■□□□□ 0.25
SPTBN4-210ENST00000596900 LINC00315P59091 139 aa16.62■□□□□ 0.25
SPTBN4-210ENST00000596900 URB1-AS1Q96HZ7 61 aa16.62■□□□□ 0.25
SPTBN4-210ENST00000596900 CRYGDP07320 174 aa16.61■□□□□ 0.25
SPTBN4-210ENST00000596900 ZNF56Q15929 161 aa16.61■□□□□ 0.25
SPTBN4-210ENST00000596900 NRACQ8N912 160 aa16.61■□□□□ 0.25
SPTBN4-210ENST00000596900 NXT2Q9NPJ8 142 aaKnown RBP16.61■□□□□ 0.25
SPTBN4-210ENST00000596900 GAS8-AS1O95177 125 aa16.61■□□□□ 0.25
SPTBN4-210ENST00000596900 IGHV4-30-4P0DP06 118 aa16.61■□□□□ 0.25
SPTBN4-210ENST00000596900 GATA1P15976 413 aaPredicted RBP16.61■□□□□ 0.25
SPTBN4-210ENST00000596900 IFI27P40305 119 aaPredicted RBP16.61■□□□□ 0.25
SPTBN4-210ENST00000596900 RASL10AQ92737 203 aa16.61■□□□□ 0.25
SPTBN4-210ENST00000596900 DAZ2Q13117 558 aaKnown RBP16.59■□□□□ 0.25
SPTBN4-210ENST00000596900 LGALS9BQ3B8N2 356 aa16.59■□□□□ 0.25
SPTBN4-210ENST00000596900 MRPL16Q9NX20 251 aaKnown RBP16.59■□□□□ 0.25
SPTBN4-210ENST00000596900 PRSS47A8MTI9 375 aa16.59■□□□□ 0.25
SPTBN4-210ENST00000596900 RHODO00212 210 aa16.59■□□□□ 0.25
SPTBN4-210ENST00000596900 SUMO4Q6EEV6 95 aa16.59■□□□□ 0.25
SPTBN4-210ENST00000596900 SMIM9A6NGZ8 99 aa16.58■□□□□ 0.24
SPTBN4-210ENST00000596900 KRTAP10-11P60412 298 aa16.58■□□□□ 0.24
SPTBN4-210ENST00000596900 FAM19A2Q8N3H0 131 aa16.58■□□□□ 0.24
SPTBN4-210ENST00000596900 C20orf78Q9BR46 151 aa16.58■□□□□ 0.24
SPTBN4-210ENST00000596900 TRGV1A0A0A0MS02 117 aa16.56■□□□□ 0.24
SPTBN4-210ENST00000596900 SUMO2P61956 95 aaKnown RBP16.56■□□□□ 0.24
SPTBN4-210ENST00000596900 IGHV1-24A0A0C4DH33 117 aa16.55■□□□□ 0.24
SPTBN4-210ENST00000596900 H7C1H1 209 aa16.55■□□□□ 0.24
SPTBN4-210ENST00000596900 SMIM6P0DI80 62 aa16.55■□□□□ 0.24
SPTBN4-210ENST00000596900 CFAP126Q5VTH2 177 aa16.55■□□□□ 0.24
SPTBN4-210ENST00000596900 Q8N8P6 123 aa16.55■□□□□ 0.24
SPTBN4-210ENST00000596900 NOP10Q9NPE3 64 aaKnown RBP16.55■□□□□ 0.24
SPTBN4-210ENST00000596900 RPL39LQ96EH5 51 aaKnown RBP16.54■□□□□ 0.24
SPTBN4-210ENST00000596900 PLAC8L1A1L4L8 177 aa16.54■□□□□ 0.24
SPTBN4-210ENST00000596900 A8MZ25 164 aa16.54■□□□□ 0.24
SPTBN4-210ENST00000596900 G3V4G9 280 aa16.54■□□□□ 0.24
SPTBN4-210ENST00000596900 RS1O15537 224 aa16.54■□□□□ 0.24
SPTBN4-210ENST00000596900 SAMD5Q5TGI4 173 aa16.54■□□□□ 0.24
SPTBN4-210ENST00000596900 MDFIQ99750 246 aa16.54■□□□□ 0.24
SPTBN4-210ENST00000596900 OVOL2Q9BRP0 275 aa16.54■□□□□ 0.24
SPTBN4-210ENST00000596900 DEFB135Q30KP9 77 aa16.53■□□□□ 0.24
SPTBN4-210ENST00000596900 SMIM2Q9BVW6 85 aa16.53■□□□□ 0.24
SPTBN4-210ENST00000596900 EDA2RQ9HAV5 297 aa16.53■□□□□ 0.24
SPTBN4-210ENST00000596900 ZFP2Q6ZN57 461 aa16.52■□□□□ 0.24
SPTBN4-210ENST00000596900 ST20Q9HBF5 79 aa16.52■□□□□ 0.24
SPTBN4-210ENST00000596900 LINC01546A6NGU7 62 aa16.52■□□□□ 0.23
SPTBN4-210ENST00000596900 M0QY20 66 aa16.52■□□□□ 0.23
SPTBN4-210ENST00000596900 UFSP1Q6NVU6 142 aa16.52■□□□□ 0.23
SPTBN4-210ENST00000596900 Q6ZTI0 123 aa16.52■□□□□ 0.23
SPTBN4-210ENST00000596900 Q6ZWC4 215 aa16.52■□□□□ 0.23
SPTBN4-210ENST00000596900 OR4C5Q8NGB2 326 aa16.52■□□□□ 0.23
SPTBN4-210ENST00000596900 X6R8D5 127 aa16.52■□□□□ 0.23
SPTBN4-210ENST00000596900 PMCHL1Q16048 86 aa16.51■□□□□ 0.23
SPTBN4-210ENST00000596900 IGLV2-18A0A075B6J9 118 aa16.5■□□□□ 0.23
SPTBN4-210ENST00000596900 K7EMI3 77 aa16.5■□□□□ 0.23
SPTBN4-210ENST00000596900 NACAE9PAV3 2078 aa16.5■□□□□ 0.23
SPTBN4-210ENST00000596900 IGHV3-73A0A0B4J1V6 119 aa16.5■□□□□ 0.23
SPTBN4-210ENST00000596900 TRBV6-5A0A0K0K1A5 114 aa16.5■□□□□ 0.23
SPTBN4-210ENST00000596900 LEPROTL1O95214 131 aa16.5■□□□□ 0.23
SPTBN4-210ENST00000596900 RPL32P62910 135 aaKnown RBP16.5■□□□□ 0.23
SPTBN4-210ENST00000596900 NIT2Q9NQR4 276 aa16.5■□□□□ 0.23
SPTBN4-210ENST00000596900 TRAV4A0A0B4J268 109 aa16.49■□□□□ 0.23
SPTBN4-210ENST00000596900 CIDEAO60543 219 aa16.48■□□□□ 0.23
SPTBN4-210ENST00000596900 HBDP02042 147 aa16.48■□□□□ 0.23
SPTBN4-210ENST00000596900 PYY3Q5JQD4 70 aa16.48■□□□□ 0.23
SPTBN4-210ENST00000596900 LINC00518Q8N0U6 118 aa16.48■□□□□ 0.23
SPTBN4-210ENST00000596900 TRGV2A0A075B6R0 118 aa16.48■□□□□ 0.23
SPTBN4-210ENST00000596900 JOSD1Q15040 202 aaPredicted RBP16.48■□□□□ 0.23
SPTBN4-210ENST00000596900 OR11H2Q8NH07 326 aa16.48■□□□□ 0.23
SPTBN4-210ENST00000596900 LAGE3Q14657 143 aa16.47■□□□□ 0.23
SPTBN4-210ENST00000596900 RNF183Q96D59 192 aa16.47■□□□□ 0.23
SPTBN4-210ENST00000596900 HSPB8Q9UJY1 196 aa16.47■□□□□ 0.23
SPTBN4-210ENST00000596900 GAGE12BA1L429 117 aa16.46■□□□□ 0.23
SPTBN4-210ENST00000596900 GAGE7O76087 117 aa16.46■□□□□ 0.23
SPTBN4-210ENST00000596900 IGHV3-53P01767 116 aa16.46■□□□□ 0.23
SPTBN4-210ENST00000596900 GAGE12FP0CL80 117 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms