RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 TCTAP57738 103 aa14.56□□□□□ -0.08
MBD3-209ENST00000592012 BOD1L2Q8IYS8 172 aa14.56□□□□□ -0.08
MBD3-209ENST00000592012 MTORP42345 2549 aa14.56□□□□□ -0.08
MBD3-209ENST00000592012 HLA-DRB4P13762 266 aa14.55□□□□□ -0.08
MBD3-209ENST00000592012 BVES-AS1Q5T3Y7 98 aa14.55□□□□□ -0.08
MBD3-209ENST00000592012 HLA-DRB4X5D2U9 266 aa14.55□□□□□ -0.08
MBD3-209ENST00000592012 SETD2Q9BYW2 2564 aaPredicted RBP14.55□□□□□ -0.08
MBD3-209ENST00000592012 A8MTW9 85 aa14.55□□□□□ -0.08
MBD3-209ENST00000592012 SUMO4Q6EEV6 95 aa14.55□□□□□ -0.08
MBD3-209ENST00000592012 TOMM6Q96B49 74 aa14.55□□□□□ -0.08
MBD3-209ENST00000592012 CSTL1Q9H114 145 aa14.55□□□□□ -0.08
MBD3-209ENST00000592012 WNK1Q9H4A3 2382 aa14.55□□□□□ -0.08
MBD3-209ENST00000592012 H3BMM0 161 aa14.54□□□□□ -0.08
MBD3-209ENST00000592012 IGKCP01834 107 aa14.54□□□□□ -0.08
MBD3-209ENST00000592012 DEFB114Q30KQ6 69 aa14.54□□□□□ -0.08
MBD3-209ENST00000592012 C12orf54Q6X4T0 127 aa14.54□□□□□ -0.08
MBD3-209ENST00000592012 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.54□□□□□ -0.08
MBD3-209ENST00000592012 RBMY1A1P0DJD3 496 aaKnown RBP14.54□□□□□ -0.08
MBD3-209ENST00000592012 RBMY1CP0DJD4 496 aa14.54□□□□□ -0.08
MBD3-209ENST00000592012 RBMY1FQ15415 496 aaKnown RBP14.54□□□□□ -0.08
MBD3-209ENST00000592012 ZNF124Q15973 351 aa14.54□□□□□ -0.08
MBD3-209ENST00000592012 DPM2O94777 84 aa14.53□□□□□ -0.08
MBD3-209ENST00000592012 DLEU1O43261 78 aa14.53□□□□□ -0.08
MBD3-209ENST00000592012 RPL32P62910 135 aaKnown RBP14.53□□□□□ -0.08
MBD3-209ENST00000592012 SYT8Q8NBV8 401 aa14.53□□□□□ -0.08
MBD3-209ENST00000592012 DYNLRB2Q8TF09 96 aa14.53□□□□□ -0.08
MBD3-209ENST00000592012 RAX2Q96IS3 184 aa14.53□□□□□ -0.08
MBD3-209ENST00000592012 YAE1D1Q9NRH1 226 aa14.53□□□□□ -0.08
MBD3-209ENST00000592012 MRPL35Q9NZE8 188 aaKnown RBP14.53□□□□□ -0.08
MBD3-209ENST00000592012 A0A087WX48 190 aa14.52□□□□□ -0.08
MBD3-209ENST00000592012 F5H697 171 aa14.52□□□□□ -0.08
MBD3-209ENST00000592012 POLR2KP53803 58 aaKnown RBP14.52□□□□□ -0.08
MBD3-209ENST00000592012 PCP2Q8IVA1 136 aa14.52□□□□□ -0.08
MBD3-209ENST00000592012 RBMY1BA6NDE4 496 aaKnown RBP14.52□□□□□ -0.09
MBD3-209ENST00000592012 RBMY1EA6NEQ0 496 aaKnown RBP14.52□□□□□ -0.09
MBD3-209ENST00000592012 CRYGDP07320 174 aa14.52□□□□□ -0.09
MBD3-209ENST00000592012 RBMY1DP0C7P1 496 aaKnown RBP14.52□□□□□ -0.09
MBD3-209ENST00000592012 NMUP48645 174 aa14.52□□□□□ -0.09
MBD3-209ENST00000592012 C11orf44Q8N8P7 122 aa14.52□□□□□ -0.09
MBD3-209ENST00000592012 SCGB3A1Q96QR1 104 aa14.52□□□□□ -0.09
MBD3-209ENST00000592012 GAGE1Q13065 139 aa14.51□□□□□ -0.09
MBD3-209ENST00000592012 CD300EQ496F6 205 aaPredicted RBP14.51□□□□□ -0.09
MBD3-209ENST00000592012 C2orf66Q6UXQ4 117 aa14.51□□□□□ -0.09
MBD3-209ENST00000592012 FAM74A4Q5TZK3 123 aa14.51□□□□□ -0.09
MBD3-209ENST00000592012 Q6ZVH6 145 aa14.51□□□□□ -0.09
MBD3-209ENST00000592012 NEGR1Q7Z3B1 354 aa14.51□□□□□ -0.09
MBD3-209ENST00000592012 MAP6D1Q9H9H5 199 aa14.51□□□□□ -0.09
MBD3-209ENST00000592012 TMEM160Q9NX00 188 aa14.51□□□□□ -0.09
MBD3-209ENST00000592012 TRGV11A0A075B6L2 103 aa14.5□□□□□ -0.09
MBD3-209ENST00000592012 IGKV2D-26A0A0A0MRZ7 120 aa14.5□□□□□ -0.09
MBD3-209ENST00000592012 TRAV12-1A0A0B4J245 112 aa14.49□□□□□ -0.09
MBD3-209ENST00000592012 CBY3A6NI87 242 aa14.49□□□□□ -0.09
MBD3-209ENST00000592012 CD28P10747 220 aa14.49□□□□□ -0.09
MBD3-209ENST00000592012 FHL3Q13643 280 aa14.49□□□□□ -0.09
MBD3-209ENST00000592012 ZNF876PQ49A33 203 aa14.49□□□□□ -0.09
MBD3-209ENST00000592012 ZC2HC1BQ5TFG8 222 aa14.49□□□□□ -0.09
MBD3-209ENST00000592012 ZNF256Q9Y2P7 627 aaPredicted RBP14.49□□□□□ -0.09
MBD3-209ENST00000592012 SIVA1O15304 175 aa14.48□□□□□ -0.09
MBD3-209ENST00000592012 COX11Q9Y6N1 276 aa14.48□□□□□ -0.09
MBD3-209ENST00000592012 A0A1W2PRX2 142 aa14.48□□□□□ -0.09
MBD3-209ENST00000592012 VCYO14598 125 aa14.48□□□□□ -0.09
MBD3-209ENST00000592012 TRBV6-5A0A0K0K1A5 114 aa14.47□□□□□ -0.09
MBD3-209ENST00000592012 M0QY20 66 aa14.47□□□□□ -0.09
MBD3-209ENST00000592012 GTSCR1Q86UQ5 136 aa14.47□□□□□ -0.09
MBD3-209ENST00000592012 NEXN-AS1Q8NBZ9 246 aa14.47□□□□□ -0.09
MBD3-209ENST00000592012 ORAOV1Q8WV07 137 aa14.47□□□□□ -0.09
MBD3-209ENST00000592012 SPAG8Q99932 426 aaPredicted RBP14.47□□□□□ -0.09
MBD3-209ENST00000592012 SDHAF1A6NFY7 115 aa14.47□□□□□ -0.09
MBD3-209ENST00000592012 CCL24O00175 119 aa14.47□□□□□ -0.09
MBD3-209ENST00000592012 RNASE1P07998 156 aaKnown RBP14.47□□□□□ -0.09
MBD3-209ENST00000592012 NPSP0C0P6 89 aa14.47□□□□□ -0.09
MBD3-209ENST00000592012 ERASQ7Z444 233 aa14.47□□□□□ -0.09
MBD3-209ENST00000592012 H7C1H1 209 aa14.46□□□□□ -0.09
MBD3-209ENST00000592012 HTN1P15515 57 aa14.46□□□□□ -0.09
MBD3-209ENST00000592012 TMEM97Q5BJF2 176 aa14.46□□□□□ -0.09
MBD3-209ENST00000592012 MORN3Q6PF18 240 aaPredicted RBP14.46□□□□□ -0.09
MBD3-209ENST00000592012 LINC01006Q8NI28 216 aa14.46□□□□□ -0.09
MBD3-209ENST00000592012 TRBV27A0A0K0K1C4 114 aa14.46□□□□□ -0.1
MBD3-209ENST00000592012 F8VRH5 84 aa14.46□□□□□ -0.1
MBD3-209ENST00000592012 PLNP26678 52 aa14.46□□□□□ -0.1
MBD3-209ENST00000592012 ZNF56Q15929 161 aa14.46□□□□□ -0.1
MBD3-209ENST00000592012 ZFP2Q6ZN57 461 aa14.46□□□□□ -0.1
MBD3-209ENST00000592012 CITED2Q99967 270 aaPredicted RBP14.46□□□□□ -0.1
MBD3-209ENST00000592012 HECTD1Q9ULT8 2610 aa14.46□□□□□ -0.1
MBD3-209ENST00000592012 C16orf95Q9H693 158 aa14.45□□□□□ -0.1
MBD3-209ENST00000592012 BAALCQ8WXS3 180 aa14.45□□□□□ -0.1
MBD3-209ENST00000592012 KIR2DL4Q99706 377 aa14.45□□□□□ -0.1
MBD3-209ENST00000592012 PRM2P04554 102 aa14.44□□□□□ -0.1
MBD3-209ENST00000592012 DEFB104AQ8WTQ1 72 aa14.44□□□□□ -0.1
MBD3-209ENST00000592012 TRAV25A0A0B4J276 109 aa14.44□□□□□ -0.1
MBD3-209ENST00000592012 TAX1BP3O14907 124 aa14.44□□□□□ -0.1
MBD3-209ENST00000592012 TTTY13Q9BZ97 58 aa14.44□□□□□ -0.1
MBD3-209ENST00000592012 CYSLTR1Q9Y271 337 aa14.44□□□□□ -0.1
MBD3-209ENST00000592012 CHTOPQ9Y3Y2 248 aaKnown RBP14.44□□□□□ -0.1
MBD3-209ENST00000592012 TSSC4Q9Y5U2 329 aaPredicted RBP14.42□□□□□ -0.1
MBD3-209ENST00000592012 NIPBLQ6KC79 2804 aaeCLIP14.42□□□□□ -0.1
MBD3-209ENST00000592012 ODF3L2Q3SX64 289 aa14.42□□□□□ -0.1
MBD3-209ENST00000592012 TP53TG1Q9Y2A0 90 aa14.42□□□□□ -0.1
MBD3-209ENST00000592012 PRSS29PA6NIE9 313 aa14.41□□□□□ -0.1
MBD3-209ENST00000592012 IGIPA6NJ69 53 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms