RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 ZNF415Q09FC8 603 aa14.47□□□□□ -0.09
TRIM47-204ENST00000587339 NIT2Q9NQR4 276 aa14.47□□□□□ -0.09
TRIM47-204ENST00000587339 KIF25-AS1Q9Y6Z4 181 aa14.47□□□□□ -0.09
TRIM47-204ENST00000587339 C3orf56Q8N813 242 aa14.46□□□□□ -0.09
TRIM47-204ENST00000587339 A0A087WWL8 130 aa14.45□□□□□ -0.1
TRIM47-204ENST00000587339 NRACQ8N912 160 aa14.45□□□□□ -0.1
TRIM47-204ENST00000587339 C1QTNF4Q9BXJ3 329 aa14.45□□□□□ -0.1
TRIM47-204ENST00000587339 GIG44P09565 113 aaPredicted RBP14.45□□□□□ -0.1
TRIM47-204ENST00000587339 MORN3Q6PF18 240 aaPredicted RBP14.45□□□□□ -0.1
TRIM47-204ENST00000587339 FBN1P35555 2871 aaKnown RBP14.44□□□□□ -0.1
TRIM47-204ENST00000587339 IGLL1P15814 213 aa14.44□□□□□ -0.1
TRIM47-204ENST00000587339 LINC00315P59091 139 aa14.44□□□□□ -0.1
TRIM47-204ENST00000587339 NOTCH3Q9UM47 2321 aa14.43□□□□□ -0.1
TRIM47-204ENST00000587339 FAM74A4Q5TZK3 123 aa14.43□□□□□ -0.1
TRIM47-204ENST00000587339 POM121L12Q8N7R1 296 aa14.43□□□□□ -0.1
TRIM47-204ENST00000587339 C11orf72Q8NBR9 251 aa14.43□□□□□ -0.1
TRIM47-204ENST00000587339 M0R2P5 195 aa14.43□□□□□ -0.1
TRIM47-204ENST00000587339 KRTDAPP60985 99 aa14.43□□□□□ -0.1
TRIM47-204ENST00000587339 NXT2Q9NPJ8 142 aaKnown RBP14.43□□□□□ -0.1
TRIM47-204ENST00000587339 SCGB1D1O95968 90 aa14.42□□□□□ -0.1
TRIM47-204ENST00000587339 CDPF1Q6NVV7 123 aa14.42□□□□□ -0.1
TRIM47-204ENST00000587339 GOLT1BQ9Y3E0 138 aa14.42□□□□□ -0.1
TRIM47-204ENST00000587339 F5H697 171 aa14.41□□□□□ -0.1
TRIM47-204ENST00000587339 LEPROTL1O95214 131 aa14.41□□□□□ -0.1
TRIM47-204ENST00000587339 AZU1P20160 251 aa14.41□□□□□ -0.1
TRIM47-204ENST00000587339 SHISA2Q6UWI4 295 aa14.41□□□□□ -0.1
TRIM47-204ENST00000587339 RASL10AQ92737 203 aa14.41□□□□□ -0.1
TRIM47-204ENST00000587339 MAST4O15021 2626 aa14.41□□□□□ -0.1
TRIM47-204ENST00000587339 PRSS47A8MTI9 375 aa14.41□□□□□ -0.1
TRIM47-204ENST00000587339 CRYGDP07320 174 aa14.41□□□□□ -0.1
TRIM47-204ENST00000587339 C12orf54Q6X4T0 127 aa14.41□□□□□ -0.1
TRIM47-204ENST00000587339 SPXQ9BT56 116 aa14.41□□□□□ -0.1
TRIM47-204ENST00000587339 WIPF1O43516 503 aa14.4□□□□□ -0.1
TRIM47-204ENST00000587339 PPP1R17O96001 155 aa14.4□□□□□ -0.1
TRIM47-204ENST00000587339 PIK3CD-AS1Q5SR53 167 aa14.4□□□□□ -0.1
TRIM47-204ENST00000587339 TMEM158Q8WZ71 300 aa14.4□□□□□ -0.1
TRIM47-204ENST00000587339 C3orf79P0CE67 100 aa14.39□□□□□ -0.11
TRIM47-204ENST00000587339 Q8N8P6 123 aa14.39□□□□□ -0.11
TRIM47-204ENST00000587339 CSNK1G2-AS1Q8NCQ2 148 aa14.39□□□□□ -0.11
TRIM47-204ENST00000587339 RPL39LQ96EH5 51 aaKnown RBP14.39□□□□□ -0.11
TRIM47-204ENST00000587339 ZNF56Q15929 161 aa14.39□□□□□ -0.11
TRIM47-204ENST00000587339 SUMO4Q6EEV6 95 aa14.39□□□□□ -0.11
TRIM47-204ENST00000587339 PTH2Q96A98 100 aa14.39□□□□□ -0.11
TRIM47-204ENST00000587339 CSTL1Q9H114 145 aa14.39□□□□□ -0.11
TRIM47-204ENST00000587339 SUMO2P61956 95 aaKnown RBP14.38□□□□□ -0.11
TRIM47-204ENST00000587339 RNASE8Q8TDE3 154 aaKnown RBP14.38□□□□□ -0.11
TRIM47-204ENST00000587339 TMEM263Q8WUH6 116 aaKnown RBP14.38□□□□□ -0.11
TRIM47-204ENST00000587339 C20orf78Q9BR46 151 aa14.38□□□□□ -0.11
TRIM47-204ENST00000587339 IGLV2-18A0A075B6J9 118 aa14.37□□□□□ -0.11
TRIM47-204ENST00000587339 LINC01546A6NGU7 62 aa14.37□□□□□ -0.11
TRIM47-204ENST00000587339 TRRAPQ9Y4A5 3859 aa14.37□□□□□ -0.11
TRIM47-204ENST00000587339 A8MWV9 139 aa14.37□□□□□ -0.11
TRIM47-204ENST00000587339 A0A096LNJ9 63 aa14.36□□□□□ -0.11
TRIM47-204ENST00000587339 BTF3P20290 206 aaKnown RBP14.36□□□□□ -0.11
TRIM47-204ENST00000587339 SMIM2Q9BVW6 85 aa14.36□□□□□ -0.11
TRIM47-204ENST00000587339 HSPB8Q9UJY1 196 aa14.36□□□□□ -0.11
TRIM47-204ENST00000587339 HBDP02042 147 aa14.35□□□□□ -0.11
TRIM47-204ENST00000587339 ZNF705AQ6ZN79 300 aaPredicted RBP14.35□□□□□ -0.11
TRIM47-204ENST00000587339 MRPL16Q9NX20 251 aaKnown RBP14.35□□□□□ -0.11
TRIM47-204ENST00000587339 LINC00173Q6ZV60 143 aa14.35□□□□□ -0.11
TRIM47-204ENST00000587339 IL17DQ8TAD2 202 aa14.35□□□□□ -0.11
TRIM47-204ENST00000587339 TMEM70Q9BUB7 260 aa14.34□□□□□ -0.11
TRIM47-204ENST00000587339 M0QY20 66 aa14.33□□□□□ -0.11
TRIM47-204ENST00000587339 RRN3P1Q2M238 152 aa14.33□□□□□ -0.12
TRIM47-204ENST00000587339 C16orf74Q96GX8 76 aa14.33□□□□□ -0.12
TRIM47-204ENST00000587339 NDUFAF3Q9BU61 184 aa14.33□□□□□ -0.12
TRIM47-204ENST00000587339 ST20Q9HBF5 79 aa14.33□□□□□ -0.12
TRIM47-204ENST00000587339 IGHV3-73A0A0B4J1V6 119 aa14.32□□□□□ -0.12
TRIM47-204ENST00000587339 TCAPO15273 167 aa14.32□□□□□ -0.12
TRIM47-204ENST00000587339 LAGE3Q14657 143 aa14.32□□□□□ -0.12
TRIM47-204ENST00000587339 CFAP126Q5VTH2 177 aa14.32□□□□□ -0.12
TRIM47-204ENST00000587339 Q8N976 141 aa14.32□□□□□ -0.12
TRIM47-204ENST00000587339 MAP1LC3CQ9BXW4 147 aa14.32□□□□□ -0.12
TRIM47-204ENST00000587339 FCER1GP30273 86 aa14.31□□□□□ -0.12
TRIM47-204ENST00000587339 STAB1Q9NY15 2570 aa14.31□□□□□ -0.12
TRIM47-204ENST00000587339 TRGV1A0A0A0MS02 117 aa14.31□□□□□ -0.12
TRIM47-204ENST00000587339 SYS1-DBNDD2H3BUS1 97 aa14.31□□□□□ -0.12
TRIM47-204ENST00000587339 OXLD1Q5BKU9 147 aa14.31□□□□□ -0.12
TRIM47-204ENST00000587339 UFSP1Q6NVU6 142 aa14.31□□□□□ -0.12
TRIM47-204ENST00000587339 RHODO00212 210 aa14.3□□□□□ -0.12
TRIM47-204ENST00000587339 DAZ2Q13117 558 aaKnown RBP14.3□□□□□ -0.12
TRIM47-204ENST00000587339 H7C1H1 209 aa14.29□□□□□ -0.12
TRIM47-204ENST00000587339 K7EMI3 77 aa14.29□□□□□ -0.12
TRIM47-204ENST00000587339 NOP10Q9NPE3 64 aaKnown RBP14.29□□□□□ -0.12
TRIM47-204ENST00000587339 TRBV6-5A0A0K0K1A5 114 aa14.29□□□□□ -0.12
TRIM47-204ENST00000587339 RPL32P62910 135 aaKnown RBP14.29□□□□□ -0.12
TRIM47-204ENST00000587339 LGALS9BQ3B8N2 356 aa14.29□□□□□ -0.12
TRIM47-204ENST00000587339 KIR2DL5BA0A0G2JN68 375 aa14.28□□□□□ -0.12
TRIM47-204ENST00000587339 KIR2DL5BA0A0G2JPC4 375 aa14.28□□□□□ -0.12
TRIM47-204ENST00000587339 PLAC8L1A1L4L8 177 aa14.28□□□□□ -0.12
TRIM47-204ENST00000587339 SDHAF1A6NFY7 115 aa14.28□□□□□ -0.12
TRIM47-204ENST00000587339 RS1O15537 224 aa14.28□□□□□ -0.12
TRIM47-204ENST00000587339 POLR2KP53803 58 aaKnown RBP14.28□□□□□ -0.12
TRIM47-204ENST00000587339 ORMDL2Q53FV1 153 aa14.28□□□□□ -0.12
TRIM47-204ENST00000587339 KIR2DL5AQ8N109 375 aa14.28□□□□□ -0.12
TRIM47-204ENST00000587339 KIR2DL5BQ8NHK3 375 aa14.28□□□□□ -0.12
TRIM47-204ENST00000587339 EDA2RQ9HAV5 297 aa14.28□□□□□ -0.12
TRIM47-204ENST00000587339 APOC4P55056 127 aa14.27□□□□□ -0.12
TRIM47-204ENST00000587339 Q6ZTI0 123 aa14.27□□□□□ -0.12
TRIM47-204ENST00000587339 H0Y8G0 127 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms