RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 ZNF575Q86XF7 245 aa6.84□□□□□ -1.31
SS18-220ENST00000582092 FAM110AQ9BQ89 295 aa6.84□□□□□ -1.31
SS18-220ENST00000582092 SPXQ9BT56 116 aa6.84□□□□□ -1.31
SS18-220ENST00000582092 TMEM70Q9BUB7 260 aa6.84□□□□□ -1.31
SS18-220ENST00000582092 XCL2Q9UBD3 114 aa6.84□□□□□ -1.31
SS18-220ENST00000582092 IGHV1-24A0A0C4DH33 117 aa6.83□□□□□ -1.32
SS18-220ENST00000582092 A8MTW9 85 aa6.83□□□□□ -1.32
SS18-220ENST00000582092 SPRY2O43597 315 aa6.83□□□□□ -1.32
SS18-220ENST00000582092 RPL35AP18077 110 aaKnown RBP6.83□□□□□ -1.32
SS18-220ENST00000582092 G0S2P27469 103 aa6.83□□□□□ -1.32
SS18-220ENST00000582092 PKIAP61925 76 aa6.83□□□□□ -1.32
SS18-220ENST00000582092 ZNF56Q15929 161 aa6.83□□□□□ -1.32
SS18-220ENST00000582092 ZNF876PQ49A33 203 aa6.83□□□□□ -1.32
SS18-220ENST00000582092 KPRPQ5T749 579 aaPredicted RBP6.83□□□□□ -1.32
SS18-220ENST00000582092 FAM74A4Q5TZK3 123 aa6.83□□□□□ -1.32
SS18-220ENST00000582092 LINC00482Q8N8I6 264 aa6.83□□□□□ -1.32
SS18-220ENST00000582092 Q8N8P6 123 aa6.83□□□□□ -1.32
SS18-220ENST00000582092 C9orf85Q96MD7 179 aa6.83□□□□□ -1.32
SS18-220ENST00000582092 VAMP8Q9BV40 100 aa6.83□□□□□ -1.32
SS18-220ENST00000582092 MDFICQ9P1T7 246 aa6.83□□□□□ -1.32
SS18-220ENST00000582092 NOTCH1P46531 2555 aa6.83□□□□□ -1.32
SS18-220ENST00000582092 TRAV26-2A0A0B4J265 109 aa6.82□□□□□ -1.32
SS18-220ENST00000582092 HSBP1L1C9JCN9 74 aa6.82□□□□□ -1.32
SS18-220ENST00000582092 H0Y8G0 127 aa6.82□□□□□ -1.32
SS18-220ENST00000582092 H7C1H1 209 aa6.82□□□□□ -1.32
SS18-220ENST00000582092 NXPH4O95158 308 aa6.82□□□□□ -1.32
SS18-220ENST00000582092 HBDP02042 147 aa6.82□□□□□ -1.32
SS18-220ENST00000582092 C3orf79P0CE67 100 aa6.82□□□□□ -1.32
SS18-220ENST00000582092 IGLL1P15814 213 aa6.82□□□□□ -1.32
SS18-220ENST00000582092 TRPT1Q86TN4 253 aaKnown RBP6.82□□□□□ -1.32
SS18-220ENST00000582092 C20orf78Q9BR46 151 aa6.82□□□□□ -1.32
SS18-220ENST00000582092 LINC00467Q9BRT7 94 aa6.82□□□□□ -1.32
SS18-220ENST00000582092 ST20Q9HBF5 79 aa6.82□□□□□ -1.32
SS18-220ENST00000582092 GSN-AS1Q9NRJ2 163 aa6.82□□□□□ -1.32
SS18-220ENST00000582092 A0A087WWL8 130 aa6.81□□□□□ -1.32
SS18-220ENST00000582092 RBMY1BA6NDE4 496 aaKnown RBP6.81□□□□□ -1.32
SS18-220ENST00000582092 RBMY1EA6NEQ0 496 aaKnown RBP6.81□□□□□ -1.32
SS18-220ENST00000582092 A8MWV9 139 aa6.81□□□□□ -1.32
SS18-220ENST00000582092 M0R2P5 195 aa6.81□□□□□ -1.32
SS18-220ENST00000582092 RBMY1DP0C7P1 496 aaKnown RBP6.81□□□□□ -1.32
SS18-220ENST00000582092 GATA1P15976 413 aaPredicted RBP6.81□□□□□ -1.32
SS18-220ENST00000582092 LAGE3Q14657 143 aa6.81□□□□□ -1.32
SS18-220ENST00000582092 MRAPQ8TCY5 172 aa6.81□□□□□ -1.32
SS18-220ENST00000582092 CRXO43186 299 aaPredicted RBP6.8□□□□□ -1.32
SS18-220ENST00000582092 NUDT3O95989 172 aa6.8□□□□□ -1.32
SS18-220ENST00000582092 FCER1GP30273 86 aa6.8□□□□□ -1.32
SS18-220ENST00000582092 SUMO2P61956 95 aaKnown RBP6.8□□□□□ -1.32
SS18-220ENST00000582092 ORMDL2Q53FV1 153 aa6.8□□□□□ -1.32
SS18-220ENST00000582092 PET117Q6UWS5 81 aa6.8□□□□□ -1.32
SS18-220ENST00000582092 ZNF705AQ6ZN79 300 aaPredicted RBP6.8□□□□□ -1.32
SS18-220ENST00000582092 URB1-AS1Q96HZ7 61 aa6.8□□□□□ -1.32
SS18-220ENST00000582092 PRO1933Q9H354 126 aa6.8□□□□□ -1.32
SS18-220ENST00000582092 VWFP04275 2813 aa6.8□□□□□ -1.32
SS18-220ENST00000582092 SORL1Q92673 2214 aa6.8□□□□□ -1.32
SS18-220ENST00000582092 PRSS47A8MTI9 375 aa6.79□□□□□ -1.32
SS18-220ENST00000582092 SYS1-DBNDD2H3BUS1 97 aa6.79□□□□□ -1.32
SS18-220ENST00000582092 K7EMI3 77 aa6.79□□□□□ -1.32
SS18-220ENST00000582092 VCYO14598 125 aa6.79□□□□□ -1.32
SS18-220ENST00000582092 ATP5LO75964 103 aa6.79□□□□□ -1.32
SS18-220ENST00000582092 KIR2DL4Q99706 377 aa6.79□□□□□ -1.32
SS18-220ENST00000582092 SMIM2Q9BVW6 85 aa6.79□□□□□ -1.32
SS18-220ENST00000582092 CSTL1Q9H114 145 aa6.79□□□□□ -1.32
SS18-220ENST00000582092 AGRNO00468 2067 aa6.79□□□□□ -1.32
SS18-220ENST00000582092 TRRAPQ9Y4A5 3859 aa6.78□□□□□ -1.32
SS18-220ENST00000582092 LINC01549A6NIU2 74 aa6.78□□□□□ -1.32
SS18-220ENST00000582092 RHODO00212 210 aa6.78□□□□□ -1.32
SS18-220ENST00000582092 TCAPO15273 167 aa6.78□□□□□ -1.32
SS18-220ENST00000582092 PRSS1P07477 247 aa6.78□□□□□ -1.32
SS18-220ENST00000582092 RRN3P1Q2M238 152 aa6.78□□□□□ -1.32
SS18-220ENST00000582092 DEFB121Q5J5C9 76 aa6.78□□□□□ -1.32
SS18-220ENST00000582092 PIK3CD-AS1Q5SR53 167 aa6.78□□□□□ -1.32
SS18-220ENST00000582092 SUMO4Q6EEV6 95 aa6.78□□□□□ -1.32
SS18-220ENST00000582092 NRACQ8N912 160 aa6.78□□□□□ -1.32
SS18-220ENST00000582092 RASL10AQ92737 203 aa6.78□□□□□ -1.32
SS18-220ENST00000582092 PTH2Q96A98 100 aa6.78□□□□□ -1.32
SS18-220ENST00000582092 IFI27L1Q96BM0 104 aa6.78□□□□□ -1.32
SS18-220ENST00000582092 JPT2Q9H910 190 aa6.78□□□□□ -1.32
SS18-220ENST00000582092 PAM16Q9Y3D7 125 aa6.78□□□□□ -1.32
SS18-220ENST00000582092 GAS8-AS1O95177 125 aa6.77□□□□□ -1.33
SS18-220ENST00000582092 PRB2P02812 416 aaPredicted RBP6.77□□□□□ -1.33
SS18-220ENST00000582092 RBMY1A1P0DJD3 496 aaKnown RBP6.77□□□□□ -1.33
SS18-220ENST00000582092 RBMY1CP0DJD4 496 aa6.77□□□□□ -1.33
SS18-220ENST00000582092 EGFEM1PQ0D2K5 195 aa6.77□□□□□ -1.33
SS18-220ENST00000582092 RBMY1FQ15415 496 aaKnown RBP6.77□□□□□ -1.33
SS18-220ENST00000582092 SPATA45Q537H7 98 aa6.77□□□□□ -1.33
SS18-220ENST00000582092 CDPF1Q6NVV7 123 aa6.77□□□□□ -1.33
SS18-220ENST00000582092 Q6ZN92 141 aa6.77□□□□□ -1.33
SS18-220ENST00000582092 TEX43Q6ZNM6 134 aa6.77□□□□□ -1.33
SS18-220ENST00000582092 DEFB125Q8N687 156 aa6.77□□□□□ -1.33
SS18-220ENST00000582092 RPL39LQ96EH5 51 aaKnown RBP6.77□□□□□ -1.33
SS18-220ENST00000582092 C16orf74Q96GX8 76 aa6.77□□□□□ -1.33
SS18-220ENST00000582092 NDUFAF3Q9BU61 184 aa6.77□□□□□ -1.33
SS18-220ENST00000582092 TNFRSF18Q9Y5U5 241 aa6.77□□□□□ -1.33
SS18-220ENST00000582092 TRGV1A0A0A0MS02 117 aa6.76□□□□□ -1.33
SS18-220ENST00000582092 IGHV3-73A0A0B4J1V6 119 aa6.76□□□□□ -1.33
SS18-220ENST00000582092 LINC01546A6NGU7 62 aa6.76□□□□□ -1.33
SS18-220ENST00000582092 CRYGDP07320 174 aa6.76□□□□□ -1.33
SS18-220ENST00000582092 AZU1P20160 251 aa6.76□□□□□ -1.33
SS18-220ENST00000582092 C1orf158Q8N1D5 194 aa6.76□□□□□ -1.33
SS18-220ENST00000582092 ZNF664Q8N3J9 261 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms