RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 PEMTQ9UBM1 199 aa17.48■□□□□ 0.39
NPLOC4-217ENST00000574897 NIPBLQ6KC79 2804 aaeCLIP17.48■□□□□ 0.39
NPLOC4-217ENST00000574897 FGF6P10767 208 aa17.47■□□□□ 0.39
NPLOC4-217ENST00000574897 C2orf91Q6ZV80 131 aa17.47■□□□□ 0.39
NPLOC4-217ENST00000574897 RBMY1BA6NDE4 496 aaKnown RBP17.47■□□□□ 0.39
NPLOC4-217ENST00000574897 RBMY1EA6NEQ0 496 aaKnown RBP17.47■□□□□ 0.39
NPLOC4-217ENST00000574897 RBMY1DP0C7P1 496 aaKnown RBP17.47■□□□□ 0.39
NPLOC4-217ENST00000574897 FAM74A4Q5TZK3 123 aa17.47■□□□□ 0.39
NPLOC4-217ENST00000574897 PRM2P04554 102 aa17.46■□□□□ 0.39
NPLOC4-217ENST00000574897 SUMO4Q6EEV6 95 aa17.46■□□□□ 0.39
NPLOC4-217ENST00000574897 POM121L12Q8N7R1 296 aa17.46■□□□□ 0.39
NPLOC4-217ENST00000574897 RAX2Q96IS3 184 aa17.46■□□□□ 0.39
NPLOC4-217ENST00000574897 C20orf78Q9BR46 151 aa17.46■□□□□ 0.39
NPLOC4-217ENST00000574897 CD28P10747 220 aa17.46■□□□□ 0.39
NPLOC4-217ENST00000574897 DYNLRB2Q8TF09 96 aa17.46■□□□□ 0.39
NPLOC4-217ENST00000574897 HTN1P15515 57 aa17.45■□□□□ 0.38
NPLOC4-217ENST00000574897 CSTL1Q9H114 145 aa17.45■□□□□ 0.38
NPLOC4-217ENST00000574897 ZMAT4Q9H898 229 aa17.45■□□□□ 0.38
NPLOC4-217ENST00000574897 HECTD1Q9ULT8 2610 aa17.44■□□□□ 0.38
NPLOC4-217ENST00000574897 F5H697 171 aa17.44■□□□□ 0.38
NPLOC4-217ENST00000574897 CD300EQ496F6 205 aaPredicted RBP17.44■□□□□ 0.38
NPLOC4-217ENST00000574897 TEX29Q8N6K0 151 aa17.44■□□□□ 0.38
NPLOC4-217ENST00000574897 H3BMM0 161 aa17.44■□□□□ 0.38
NPLOC4-217ENST00000574897 ATP5LO75964 103 aa17.44■□□□□ 0.38
NPLOC4-217ENST00000574897 PCP2Q8IVA1 136 aa17.44■□□□□ 0.38
NPLOC4-217ENST00000574897 TMEM208Q9BTX3 173 aa17.44■□□□□ 0.38
NPLOC4-217ENST00000574897 HHLA3Q9XRX5 114 aa17.44■□□□□ 0.38
NPLOC4-217ENST00000574897 HLA-DRB4P13762 266 aa17.43■□□□□ 0.38
NPLOC4-217ENST00000574897 NMUP48645 174 aa17.43■□□□□ 0.38
NPLOC4-217ENST00000574897 DEFB114Q30KQ6 69 aa17.43■□□□□ 0.38
NPLOC4-217ENST00000574897 HLA-DRB4X5D2U9 266 aa17.43■□□□□ 0.38
NPLOC4-217ENST00000574897 MAP6D1Q9H9H5 199 aa17.43■□□□□ 0.38
NPLOC4-217ENST00000574897 MRPL35Q9NZE8 188 aaKnown RBP17.43■□□□□ 0.38
NPLOC4-217ENST00000574897 IGKV2D-26A0A0A0MRZ7 120 aa17.42■□□□□ 0.38
NPLOC4-217ENST00000574897 ORMDL2Q53FV1 153 aa17.42■□□□□ 0.38
NPLOC4-217ENST00000574897 BVES-AS1Q5T3Y7 98 aa17.42■□□□□ 0.38
NPLOC4-217ENST00000574897 IGKCP01834 107 aa17.41■□□□□ 0.38
NPLOC4-217ENST00000574897 CBY3A6NI87 242 aa17.4■□□□□ 0.38
NPLOC4-217ENST00000574897 TTTY13Q9BZ97 58 aa17.4■□□□□ 0.38
NPLOC4-217ENST00000574897 BOD1L2Q8IYS8 172 aa17.4■□□□□ 0.38
NPLOC4-217ENST00000574897 CITED2Q99967 270 aaPredicted RBP17.4■□□□□ 0.38
NPLOC4-217ENST00000574897 TMEM160Q9NX00 188 aa17.4■□□□□ 0.38
NPLOC4-217ENST00000574897 CRYGDP07320 174 aa17.39■□□□□ 0.38
NPLOC4-217ENST00000574897 TOMM6Q96B49 74 aa17.39■□□□□ 0.38
NPLOC4-217ENST00000574897 SMR3AQ99954 134 aa17.39■□□□□ 0.38
NPLOC4-217ENST00000574897 NACAE9PAV3 2078 aa17.39■□□□□ 0.37
NPLOC4-217ENST00000574897 C2orf66Q6UXQ4 117 aa17.39■□□□□ 0.37
NPLOC4-217ENST00000574897 GTSCR1Q86UQ5 136 aa17.39■□□□□ 0.37
NPLOC4-217ENST00000574897 SCGB3A1Q96QR1 104 aa17.39■□□□□ 0.37
NPLOC4-217ENST00000574897 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.38■□□□□ 0.37
NPLOC4-217ENST00000574897 DPM2O94777 84 aa17.38■□□□□ 0.37
NPLOC4-217ENST00000574897 ZNF876PQ49A33 203 aa17.38■□□□□ 0.37
NPLOC4-217ENST00000574897 ZNF56Q15929 161 aa17.38■□□□□ 0.37
NPLOC4-217ENST00000574897 LINC01006Q8NI28 216 aa17.38■□□□□ 0.37
NPLOC4-217ENST00000574897 ZNF256Q9Y2P7 627 aaPredicted RBP17.38■□□□□ 0.37
NPLOC4-217ENST00000574897 SETXQ7Z333 2677 aaKnown RBP17.37■□□□□ 0.37
NPLOC4-217ENST00000574897 A8MTW9 85 aa17.37■□□□□ 0.37
NPLOC4-217ENST00000574897 MORN3Q6PF18 240 aaPredicted RBP17.37■□□□□ 0.37
NPLOC4-217ENST00000574897 SYT8Q8NBV8 401 aa17.37■□□□□ 0.37
NPLOC4-217ENST00000574897 CCL24O00175 119 aa17.37■□□□□ 0.37
NPLOC4-217ENST00000574897 DLEU1O43261 78 aa17.37■□□□□ 0.37
NPLOC4-217ENST00000574897 ZC2HC1BQ5TFG8 222 aa17.37■□□□□ 0.37
NPLOC4-217ENST00000574897 A0A087WX48 190 aa17.36■□□□□ 0.37
NPLOC4-217ENST00000574897 TRAV2A0A0B4J234 112 aa17.36■□□□□ 0.37
NPLOC4-217ENST00000574897 PPP1R17O96001 155 aa17.36■□□□□ 0.37
NPLOC4-217ENST00000574897 NPSP0C0P6 89 aa17.36■□□□□ 0.37
NPLOC4-217ENST00000574897 POLR2KP53803 58 aaKnown RBP17.36■□□□□ 0.37
NPLOC4-217ENST00000574897 FHL3Q13643 280 aa17.36■□□□□ 0.37
NPLOC4-217ENST00000574897 JMJD1CQ15652 2540 aa17.35■□□□□ 0.37
NPLOC4-217ENST00000574897 TRGV11A0A075B6L2 103 aa17.35■□□□□ 0.37
NPLOC4-217ENST00000574897 SDHAF1A6NFY7 115 aa17.35■□□□□ 0.37
NPLOC4-217ENST00000574897 ERASQ7Z444 233 aa17.35■□□□□ 0.37
NPLOC4-217ENST00000574897 C12orf54Q6X4T0 127 aa17.34■□□□□ 0.37
NPLOC4-217ENST00000574897 M0QY20 66 aa17.33■□□□□ 0.37
NPLOC4-217ENST00000574897 RNASE1P07998 156 aaKnown RBP17.33■□□□□ 0.37
NPLOC4-217ENST00000574897 K7EMI3 77 aa17.33■□□□□ 0.36
NPLOC4-217ENST00000574897 ODF3L2Q3SX64 289 aa17.33■□□□□ 0.36
NPLOC4-217ENST00000574897 ZFP2Q6ZN57 461 aa17.32■□□□□ 0.36
NPLOC4-217ENST00000574897 IGHV3-73A0A0B4J1V6 119 aa17.32■□□□□ 0.36
NPLOC4-217ENST00000574897 RPL39P62891 51 aaKnown RBP17.32■□□□□ 0.36
NPLOC4-217ENST00000574897 NEXN-AS1Q8NBZ9 246 aa17.32■□□□□ 0.36
NPLOC4-217ENST00000574897 BAALCQ8WXS3 180 aa17.32■□□□□ 0.36
NPLOC4-217ENST00000574897 SPAG8Q99932 426 aaPredicted RBP17.31■□□□□ 0.36
NPLOC4-217ENST00000574897 COX11Q9Y6N1 276 aa17.31■□□□□ 0.36
NPLOC4-217ENST00000574897 NOTCH2Q04721 2471 aa17.31■□□□□ 0.36
NPLOC4-217ENST00000574897 HIVEP2P31629 2446 aa17.31■□□□□ 0.36
NPLOC4-217ENST00000574897 TP53TG1Q9Y2A0 90 aa17.31■□□□□ 0.36
NPLOC4-217ENST00000574897 NOTCH3Q9UM47 2321 aa17.3■□□□□ 0.36
NPLOC4-217ENST00000574897 PROK1P58294 105 aa17.3■□□□□ 0.36
NPLOC4-217ENST00000574897 RPL32P62910 135 aaKnown RBP17.3■□□□□ 0.36
NPLOC4-217ENST00000574897 TMEM97Q5BJF2 176 aa17.3■□□□□ 0.36
NPLOC4-217ENST00000574897 F8VRH5 84 aa17.29■□□□□ 0.36
NPLOC4-217ENST00000574897 VCYO14598 125 aa17.29■□□□□ 0.36
NPLOC4-217ENST00000574897 CHTOPQ9Y3Y2 248 aaKnown RBP17.29■□□□□ 0.36
NPLOC4-217ENST00000574897 TRAV12-1A0A0B4J245 112 aa17.29■□□□□ 0.36
NPLOC4-217ENST00000574897 H7C1H1 209 aa17.29■□□□□ 0.36
NPLOC4-217ENST00000574897 TAX1BP3O14907 124 aa17.29■□□□□ 0.36
NPLOC4-217ENST00000574897 TSHBP01222 138 aa17.29■□□□□ 0.36
NPLOC4-217ENST00000574897 TSSC4Q9Y5U2 329 aaPredicted RBP17.28■□□□□ 0.36
NPLOC4-217ENST00000574897 TRBV6-5A0A0K0K1A5 114 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms