RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 MAP6D1Q9H9H5 199 aa10.38□□□□□ -0.75
VPS33B-208ENST00000574755 WNK1Q9H4A3 2382 aa10.37□□□□□ -0.75
VPS33B-208ENST00000574755 F5H697 171 aa10.37□□□□□ -0.75
VPS33B-208ENST00000574755 HINT1P49773 126 aaPredicted RBP10.37□□□□□ -0.75
VPS33B-208ENST00000574755 FHL3Q13643 280 aa10.37□□□□□ -0.75
VPS33B-208ENST00000574755 ORMDL2Q53FV1 153 aa10.37□□□□□ -0.75
VPS33B-208ENST00000574755 FAM74A4Q5TZK3 123 aa10.37□□□□□ -0.75
VPS33B-208ENST00000574755 CBY3A6NI87 242 aa10.37□□□□□ -0.75
VPS33B-208ENST00000574755 RBMY1A1P0DJD3 496 aaKnown RBP10.37□□□□□ -0.75
VPS33B-208ENST00000574755 RBMY1CP0DJD4 496 aa10.37□□□□□ -0.75
VPS33B-208ENST00000574755 HTN1P15515 57 aa10.37□□□□□ -0.75
VPS33B-208ENST00000574755 RBMY1FQ15415 496 aaKnown RBP10.37□□□□□ -0.75
VPS33B-208ENST00000574755 COL5A1-AS1Q5SY13 56 aa10.37□□□□□ -0.75
VPS33B-208ENST00000574755 STPG4Q8N801 248 aa10.37□□□□□ -0.75
VPS33B-208ENST00000574755 ZNF418Q8TF45 676 aaPredicted RBP10.37□□□□□ -0.75
VPS33B-208ENST00000574755 SETD2Q9BYW2 2564 aaPredicted RBP10.36□□□□□ -0.75
VPS33B-208ENST00000574755 TRGV11A0A075B6L2 103 aa10.36□□□□□ -0.75
VPS33B-208ENST00000574755 ODF1Q14990 250 aa10.36□□□□□ -0.75
VPS33B-208ENST00000574755 ANKRD39Q53RE8 183 aa10.36□□□□□ -0.75
VPS33B-208ENST00000574755 SUMO4Q6EEV6 95 aa10.36□□□□□ -0.75
VPS33B-208ENST00000574755 SPAG8Q99932 426 aaPredicted RBP10.36□□□□□ -0.75
VPS33B-208ENST00000574755 RBMY1BA6NDE4 496 aaKnown RBP10.36□□□□□ -0.75
VPS33B-208ENST00000574755 RBMY1EA6NEQ0 496 aaKnown RBP10.36□□□□□ -0.75
VPS33B-208ENST00000574755 K7EMI3 77 aa10.36□□□□□ -0.75
VPS33B-208ENST00000574755 RBMY1DP0C7P1 496 aaKnown RBP10.36□□□□□ -0.75
VPS33B-208ENST00000574755 COX8AP10176 69 aa10.36□□□□□ -0.75
VPS33B-208ENST00000574755 TCTAP57738 103 aa10.36□□□□□ -0.75
VPS33B-208ENST00000574755 CSTL1Q9H114 145 aa10.36□□□□□ -0.75
VPS33B-208ENST00000574755 C16orf95Q9H693 158 aa10.36□□□□□ -0.75
VPS33B-208ENST00000574755 TSSC4Q9Y5U2 329 aaPredicted RBP10.36□□□□□ -0.75
VPS33B-208ENST00000574755 ANK3Q12955 4377 aaKnown RBP10.36□□□□□ -0.75
VPS33B-208ENST00000574755 A8MTW9 85 aa10.35□□□□□ -0.75
VPS33B-208ENST00000574755 SMR3AQ99954 134 aa10.35□□□□□ -0.75
VPS33B-208ENST00000574755 ZNF876PQ49A33 203 aa10.34□□□□□ -0.75
VPS33B-208ENST00000574755 ZNF256Q9Y2P7 627 aaPredicted RBP10.34□□□□□ -0.75
VPS33B-208ENST00000574755 HECTD1Q9ULT8 2610 aa10.34□□□□□ -0.75
VPS33B-208ENST00000574755 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.34□□□□□ -0.75
VPS33B-208ENST00000574755 HILS1P60008 231 aa10.34□□□□□ -0.75
VPS33B-208ENST00000574755 ZNF56Q15929 161 aa10.34□□□□□ -0.75
VPS33B-208ENST00000574755 NEGR1Q7Z3B1 354 aa10.33□□□□□ -0.76
VPS33B-208ENST00000574755 TOMM6Q96B49 74 aa10.33□□□□□ -0.76
VPS33B-208ENST00000574755 TRAV25A0A0B4J276 109 aa10.32□□□□□ -0.76
VPS33B-208ENST00000574755 IGKCP01834 107 aa10.32□□□□□ -0.76
VPS33B-208ENST00000574755 SCGB3A1Q96QR1 104 aa10.32□□□□□ -0.76
VPS33B-208ENST00000574755 ZMAT4Q9H898 229 aa10.32□□□□□ -0.76
VPS33B-208ENST00000574755 CRYGDP07320 174 aa10.32□□□□□ -0.76
VPS33B-208ENST00000574755 MPV17L2Q567V2 206 aa10.32□□□□□ -0.76
VPS33B-208ENST00000574755 C2orf66Q6UXQ4 117 aa10.32□□□□□ -0.76
VPS33B-208ENST00000574755 TMEM160Q9NX00 188 aa10.32□□□□□ -0.76
VPS33B-208ENST00000574755 ZMAT5Q9UDW3 170 aaKnown RBP10.32□□□□□ -0.76
VPS33B-208ENST00000574755 DPM2O94777 84 aa10.31□□□□□ -0.76
VPS33B-208ENST00000574755 NMUP48645 174 aa10.31□□□□□ -0.76
VPS33B-208ENST00000574755 LINC00469Q8N7U9 141 aa10.31□□□□□ -0.76
VPS33B-208ENST00000574755 HIVEP2P31629 2446 aa10.31□□□□□ -0.76
VPS33B-208ENST00000574755 ODF3L2Q3SX64 289 aa10.31□□□□□ -0.76
VPS33B-208ENST00000574755 MRPL35Q9NZE8 188 aaKnown RBP10.31□□□□□ -0.76
VPS33B-208ENST00000574755 HHLA3Q9XRX5 114 aa10.31□□□□□ -0.76
VPS33B-208ENST00000574755 SDHAF1A6NFY7 115 aa10.3□□□□□ -0.76
VPS33B-208ENST00000574755 PRM2P04554 102 aa10.3□□□□□ -0.76
VPS33B-208ENST00000574755 FGF6P10767 208 aa10.3□□□□□ -0.76
VPS33B-208ENST00000574755 POLR2KP53803 58 aaKnown RBP10.3□□□□□ -0.76
VPS33B-208ENST00000574755 RPL32P62910 135 aaKnown RBP10.3□□□□□ -0.76
VPS33B-208ENST00000574755 KIR2DL4Q99706 377 aa10.3□□□□□ -0.76
VPS33B-208ENST00000574755 A0A087WX48 190 aa10.3□□□□□ -0.76
VPS33B-208ENST00000574755 VCYO14598 125 aa10.3□□□□□ -0.76
VPS33B-208ENST00000574755 DEFB104AQ8WTQ1 72 aa10.3□□□□□ -0.76
VPS33B-208ENST00000574755 M0QY20 66 aa10.29□□□□□ -0.76
VPS33B-208ENST00000574755 C2orf91Q6ZV80 131 aa10.29□□□□□ -0.76
VPS33B-208ENST00000574755 STHQ8IWL8 128 aa10.29□□□□□ -0.76
VPS33B-208ENST00000574755 BOD1L2Q8IYS8 172 aa10.29□□□□□ -0.76
VPS33B-208ENST00000574755 LINC01587Q99440 93 aa10.29□□□□□ -0.76
VPS33B-208ENST00000574755 INSP01308 110 aa10.29□□□□□ -0.76
VPS33B-208ENST00000574755 ZNF25P17030 456 aaPredicted RBP10.29□□□□□ -0.76
VPS33B-208ENST00000574755 ZC2HC1BQ5TFG8 222 aa10.29□□□□□ -0.76
VPS33B-208ENST00000574755 C12orf54Q6X4T0 127 aa10.29□□□□□ -0.76
VPS33B-208ENST00000574755 TRBV6-5A0A0K0K1A5 114 aa10.28□□□□□ -0.76
VPS33B-208ENST00000574755 OR11H12B2RN74 326 aa10.28□□□□□ -0.76
VPS33B-208ENST00000574755 SAP30O75446 220 aa10.28□□□□□ -0.76
VPS33B-208ENST00000574755 G0S2P27469 103 aa10.28□□□□□ -0.76
VPS33B-208ENST00000574755 ZNF415Q09FC8 603 aa10.28□□□□□ -0.76
VPS33B-208ENST00000574755 ZFP2Q6ZN57 461 aa10.28□□□□□ -0.76
VPS33B-208ENST00000574755 NIPBLQ6KC79 2804 aaeCLIP10.28□□□□□ -0.76
VPS33B-208ENST00000574755 TRAV12-1A0A0B4J245 112 aa10.28□□□□□ -0.76
VPS33B-208ENST00000574755 TRBV27A0A0K0K1C4 114 aa10.28□□□□□ -0.76
VPS33B-208ENST00000574755 PLNP26678 52 aa10.28□□□□□ -0.76
VPS33B-208ENST00000574755 ERASQ7Z444 233 aa10.28□□□□□ -0.76
VPS33B-208ENST00000574755 TRPT1Q86TN4 253 aaKnown RBP10.28□□□□□ -0.76
VPS33B-208ENST00000574755 PCP2Q8IVA1 136 aa10.28□□□□□ -0.76
VPS33B-208ENST00000574755 JMJD8Q96S16 334 aa10.28□□□□□ -0.76
VPS33B-208ENST00000574755 CYSLTR1Q9Y271 337 aa10.28□□□□□ -0.76
VPS33B-208ENST00000574755 H7C1H1 209 aa10.27□□□□□ -0.77
VPS33B-208ENST00000574755 NDUFA7O95182 113 aa10.27□□□□□ -0.77
VPS33B-208ENST00000574755 LY6G6DO95868 133 aa10.27□□□□□ -0.77
VPS33B-208ENST00000574755 NSUN5P1Q3KNT7 163 aa10.27□□□□□ -0.77
VPS33B-208ENST00000574755 BVES-AS1Q5T3Y7 98 aa10.27□□□□□ -0.77
VPS33B-208ENST00000574755 MORN3Q6PF18 240 aaPredicted RBP10.27□□□□□ -0.77
VPS33B-208ENST00000574755 GTSCR1Q86UQ5 136 aa10.27□□□□□ -0.77
VPS33B-208ENST00000574755 XCL2Q9UBD3 114 aa10.27□□□□□ -0.77
VPS33B-208ENST00000574755 IGKV2D-26A0A0A0MRZ7 120 aa10.26□□□□□ -0.77
VPS33B-208ENST00000574755 F8VRH5 84 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms