RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 SMIM17P0DL12 118 aa16.38■□□□□ 0.21
VCPKMT-205ENST00000569518 RPL35AP18077 110 aaKnown RBP16.38■□□□□ 0.21
VCPKMT-205ENST00000569518 RASL10AQ92737 203 aa16.38■□□□□ 0.21
VCPKMT-205ENST00000569518 MAST4O15021 2626 aa16.37■□□□□ 0.21
VCPKMT-205ENST00000569518 FBN1P35555 2871 aaKnown RBP16.37■□□□□ 0.21
VCPKMT-205ENST00000569518 IGLV2-18A0A075B6J9 118 aa16.37■□□□□ 0.21
VCPKMT-205ENST00000569518 GTSCR1Q86UQ5 136 aa16.37■□□□□ 0.21
VCPKMT-205ENST00000569518 PTH2Q96A98 100 aa16.37■□□□□ 0.21
VCPKMT-205ENST00000569518 NXT2Q9NPJ8 142 aaKnown RBP16.37■□□□□ 0.21
VCPKMT-205ENST00000569518 A0A087WWL8 130 aa16.36■□□□□ 0.21
VCPKMT-205ENST00000569518 A0A096LNJ9 63 aa16.36■□□□□ 0.21
VCPKMT-205ENST00000569518 WIPF1O43516 503 aa16.36■□□□□ 0.21
VCPKMT-205ENST00000569518 CRYGDP07320 174 aa16.36■□□□□ 0.21
VCPKMT-205ENST00000569518 MORN3Q6PF18 240 aaPredicted RBP16.36■□□□□ 0.21
VCPKMT-205ENST00000569518 TMEM208Q9BTX3 173 aa16.36■□□□□ 0.21
VCPKMT-205ENST00000569518 C3orf79P0CE67 100 aa16.35■□□□□ 0.21
VCPKMT-205ENST00000569518 KRTDAPP60985 99 aa16.35■□□□□ 0.21
VCPKMT-205ENST00000569518 PIK3CD-AS1Q5SR53 167 aa16.35■□□□□ 0.21
VCPKMT-205ENST00000569518 M0R2P5 195 aa16.35■□□□□ 0.21
VCPKMT-205ENST00000569518 Q8N976 141 aa16.35■□□□□ 0.21
VCPKMT-205ENST00000569518 CSNK1G2-AS1Q8NCQ2 148 aa16.35■□□□□ 0.21
VCPKMT-205ENST00000569518 SCGB1D1O95968 90 aa16.34■□□□□ 0.21
VCPKMT-205ENST00000569518 AZU1P20160 251 aa16.34■□□□□ 0.21
VCPKMT-205ENST00000569518 Q8N8P6 123 aa16.34■□□□□ 0.21
VCPKMT-205ENST00000569518 C1QTNF4Q9BXJ3 329 aa16.34■□□□□ 0.21
VCPKMT-205ENST00000569518 IL17DQ8TAD2 202 aa16.33■□□□□ 0.21
VCPKMT-205ENST00000569518 RPL39LQ96EH5 51 aaKnown RBP16.33■□□□□ 0.21
VCPKMT-205ENST00000569518 SPXQ9BT56 116 aa16.33■□□□□ 0.21
VCPKMT-205ENST00000569518 LEPROTL1O95214 131 aa16.33■□□□□ 0.2
VCPKMT-205ENST00000569518 IGLL1P15814 213 aa16.33■□□□□ 0.2
VCPKMT-205ENST00000569518 SUMO4Q6EEV6 95 aa16.33■□□□□ 0.2
VCPKMT-205ENST00000569518 LINC00173Q6ZV60 143 aa16.33■□□□□ 0.2
VCPKMT-205ENST00000569518 C20orf78Q9BR46 151 aa16.33■□□□□ 0.2
VCPKMT-205ENST00000569518 IGHV3OR16-12A0A075B7B8 117 aa16.32■□□□□ 0.2
VCPKMT-205ENST00000569518 RNASE8Q8TDE3 154 aaKnown RBP16.32■□□□□ 0.2
VCPKMT-205ENST00000569518 TRRAPQ9Y4A5 3859 aa16.31■□□□□ 0.2
VCPKMT-205ENST00000569518 PPP1R17O96001 155 aa16.31■□□□□ 0.2
VCPKMT-205ENST00000569518 SUMO2P61956 95 aaKnown RBP16.31■□□□□ 0.2
VCPKMT-205ENST00000569518 FAM74A4Q5TZK3 123 aa16.31■□□□□ 0.2
VCPKMT-205ENST00000569518 GOLT1BQ9Y3E0 138 aa16.31■□□□□ 0.2
VCPKMT-205ENST00000569518 SMIM2Q9BVW6 85 aa16.31■□□□□ 0.2
VCPKMT-205ENST00000569518 BTF3P20290 206 aaKnown RBP16.29■□□□□ 0.2
VCPKMT-205ENST00000569518 UFSP1Q6NVU6 142 aa16.29■□□□□ 0.2
VCPKMT-205ENST00000569518 ZNF705AQ6ZN79 300 aaPredicted RBP16.29■□□□□ 0.2
VCPKMT-205ENST00000569518 C3orf56Q8N813 242 aa16.29■□□□□ 0.2
VCPKMT-205ENST00000569518 TMEM263Q8WUH6 116 aaKnown RBP16.29■□□□□ 0.2
VCPKMT-205ENST00000569518 STAB1Q9NY15 2570 aa16.29■□□□□ 0.2
VCPKMT-205ENST00000569518 F5H697 171 aa16.29■□□□□ 0.2
VCPKMT-205ENST00000569518 HBDP02042 147 aa16.29■□□□□ 0.2
VCPKMT-205ENST00000569518 SHISA2Q6UWI4 295 aa16.29■□□□□ 0.2
VCPKMT-205ENST00000569518 HSPB8Q9UJY1 196 aa16.29■□□□□ 0.2
VCPKMT-205ENST00000569518 NACAE9PAV3 2078 aa16.28■□□□□ 0.2
VCPKMT-205ENST00000569518 A8MWV9 139 aa16.28■□□□□ 0.2
VCPKMT-205ENST00000569518 M0QY20 66 aa16.27■□□□□ 0.2
VCPKMT-205ENST00000569518 ZNF56Q15929 161 aa16.27■□□□□ 0.2
VCPKMT-205ENST00000569518 NDUFAF3Q9BU61 184 aa16.27■□□□□ 0.2
VCPKMT-205ENST00000569518 TMEM70Q9BUB7 260 aa16.27■□□□□ 0.2
VCPKMT-205ENST00000569518 CSTL1Q9H114 145 aa16.27■□□□□ 0.2
VCPKMT-205ENST00000569518 RPL32P62910 135 aaKnown RBP16.26■□□□□ 0.19
VCPKMT-205ENST00000569518 TEX43Q6ZNM6 134 aa16.26■□□□□ 0.19
VCPKMT-205ENST00000569518 TMEM158Q8WZ71 300 aa16.26■□□□□ 0.19
VCPKMT-205ENST00000569518 MRPL16Q9NX20 251 aaKnown RBP16.26■□□□□ 0.19
VCPKMT-205ENST00000569518 FCER1GP30273 86 aa16.26■□□□□ 0.19
VCPKMT-205ENST00000569518 SPATA12Q7Z6I5 190 aa16.26■□□□□ 0.19
VCPKMT-205ENST00000569518 TRBV6-5A0A0K0K1A5 114 aa16.25■□□□□ 0.19
VCPKMT-205ENST00000569518 SYS1-DBNDD2H3BUS1 97 aa16.25■□□□□ 0.19
VCPKMT-205ENST00000569518 CFAP126Q5VTH2 177 aa16.25■□□□□ 0.19
VCPKMT-205ENST00000569518 EDA2RQ9HAV5 297 aa16.25■□□□□ 0.19
VCPKMT-205ENST00000569518 PLAC8L1A1L4L8 177 aa16.24■□□□□ 0.19
VCPKMT-205ENST00000569518 S100A12P80511 92 aa16.24■□□□□ 0.19
VCPKMT-205ENST00000569518 C12orf54Q6X4T0 127 aa16.24■□□□□ 0.19
VCPKMT-205ENST00000569518 PCP4L1A6NKN8 68 aa16.24■□□□□ 0.19
VCPKMT-205ENST00000569518 TCAPO15273 167 aa16.24■□□□□ 0.19
VCPKMT-205ENST00000569518 LAGE3Q14657 143 aa16.24■□□□□ 0.19
VCPKMT-205ENST00000569518 C16orf74Q96GX8 76 aa16.24■□□□□ 0.19
VCPKMT-205ENST00000569518 ST20Q9HBF5 79 aa16.24■□□□□ 0.19
VCPKMT-205ENST00000569518 POLR2KP53803 58 aaKnown RBP16.23■□□□□ 0.19
VCPKMT-205ENST00000569518 MAP1LC3CQ9BXW4 147 aa16.23■□□□□ 0.19
VCPKMT-205ENST00000569518 K7EMI3 77 aa16.22■□□□□ 0.19
VCPKMT-205ENST00000569518 RS1O15537 224 aa16.22■□□□□ 0.19
VCPKMT-205ENST00000569518 DAZ2Q13117 558 aaKnown RBP16.22■□□□□ 0.19
VCPKMT-205ENST00000569518 RHODO00212 210 aa16.21■□□□□ 0.19
VCPKMT-205ENST00000569518 ZNF664Q8N3J9 261 aa16.21■□□□□ 0.19
VCPKMT-205ENST00000569518 LGALS9BQ3B8N2 356 aa16.2■□□□□ 0.18
VCPKMT-205ENST00000569518 PET117Q6UWS5 81 aa16.2■□□□□ 0.18
VCPKMT-205ENST00000569518 IGHV3-73A0A0B4J1V6 119 aa16.19■□□□□ 0.18
VCPKMT-205ENST00000569518 RRN3P1Q2M238 152 aa16.19■□□□□ 0.18
VCPKMT-205ENST00000569518 TRGV1A0A0A0MS02 117 aa16.19■□□□□ 0.18
VCPKMT-205ENST00000569518 KIR2DL5BA0A0G2JN68 375 aa16.19■□□□□ 0.18
VCPKMT-205ENST00000569518 KIR2DL5BA0A0G2JPC4 375 aa16.19■□□□□ 0.18
VCPKMT-205ENST00000569518 TRBV27A0A0K0K1C4 114 aa16.19■□□□□ 0.18
VCPKMT-205ENST00000569518 SDHAF1A6NFY7 115 aa16.19■□□□□ 0.18
VCPKMT-205ENST00000569518 ORMDL2Q53FV1 153 aa16.19■□□□□ 0.18
VCPKMT-205ENST00000569518 KIR2DL5AQ8N109 375 aa16.19■□□□□ 0.18
VCPKMT-205ENST00000569518 KIR2DL5BQ8NHK3 375 aa16.19■□□□□ 0.18
VCPKMT-205ENST00000569518 H7C1H1 209 aa16.18■□□□□ 0.18
VCPKMT-205ENST00000569518 ZFP2Q6ZN57 461 aa16.18■□□□□ 0.18
VCPKMT-205ENST00000569518 Q6ZSN1 163 aa16.18■□□□□ 0.18
VCPKMT-205ENST00000569518 Q6ZTI0 123 aa16.18■□□□□ 0.18
VCPKMT-205ENST00000569518 NEGR1Q7Z3B1 354 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms