RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 RPL23P62829 140 aaKnown RBP4.31□□□□□ -1.72
UBFD1-204ENST00000565634 PNRC1Q12796 327 aaPredicted RBP4.31□□□□□ -1.72
UBFD1-204ENST00000565634 TMEM241Q24JQ0 296 aa4.31□□□□□ -1.72
UBFD1-204ENST00000565634 SMUG1Q53HV7 270 aa4.31□□□□□ -1.72
UBFD1-204ENST00000565634 NEXN-AS1Q8NBZ9 246 aa4.31□□□□□ -1.72
UBFD1-204ENST00000565634 SMIM7Q9BQ49 75 aa4.31□□□□□ -1.72
UBFD1-204ENST00000565634 JPT2Q9H910 190 aa4.31□□□□□ -1.72
UBFD1-204ENST00000565634 SDF2L1Q9HCN8 221 aa4.31□□□□□ -1.72
UBFD1-204ENST00000565634 NAGKQ9UJ70 344 aa4.31□□□□□ -1.72
UBFD1-204ENST00000565634 ZFP30Q9Y2G7 519 aa4.31□□□□□ -1.72
UBFD1-204ENST00000565634 PAM16Q9Y3D7 125 aa4.31□□□□□ -1.72
UBFD1-204ENST00000565634 TIMM8BQ9Y5J9 83 aaPredicted RBP4.31□□□□□ -1.72
UBFD1-204ENST00000565634 LENEPQ9Y5L5 61 aa4.31□□□□□ -1.72
UBFD1-204ENST00000565634 MYCBP2O75592 4640 aa4.31□□□□□ -1.72
UBFD1-204ENST00000565634 IGHV3-16A0A0C4DH30 117 aa4.3□□□□□ -1.72
UBFD1-204ENST00000565634 TRBV7-9A0A0J9YWB2 115 aa4.3□□□□□ -1.72
UBFD1-204ENST00000565634 SERTM2A0A1B0GWG4 89 aa4.3□□□□□ -1.72
UBFD1-204ENST00000565634 TMEM218A2RU14 115 aa4.3□□□□□ -1.72
UBFD1-204ENST00000565634 KRTAP29-1A8MX34 341 aaPredicted RBP4.3□□□□□ -1.72
UBFD1-204ENST00000565634 K7EQM0 130 aa4.3□□□□□ -1.72
UBFD1-204ENST00000565634 INSP01308 110 aa4.3□□□□□ -1.72
UBFD1-204ENST00000565634 ORM1P02763 201 aa4.3□□□□□ -1.72
UBFD1-204ENST00000565634 SMR3BP02814 79 aaPredicted RBP4.3□□□□□ -1.72
UBFD1-204ENST00000565634 TYMSP04818 313 aa4.3□□□□□ -1.72
UBFD1-204ENST00000565634 RNASE3P12724 160 aaKnown RBP4.3□□□□□ -1.72
UBFD1-204ENST00000565634 GNG4P50150 75 aa4.3□□□□□ -1.72
UBFD1-204ENST00000565634 NUTF2P61970 127 aaKnown RBP4.3□□□□□ -1.72
UBFD1-204ENST00000565634 C12orf74Q32Q52 190 aa4.3□□□□□ -1.72
UBFD1-204ENST00000565634 SOHLH1Q5JUK2 328 aa4.3□□□□□ -1.72
UBFD1-204ENST00000565634 SAPCD1Q5SSQ6 148 aa4.3□□□□□ -1.72
UBFD1-204ENST00000565634 LINC01551Q86U37 167 aa4.3□□□□□ -1.72
UBFD1-204ENST00000565634 POM121L12Q8N7R1 296 aa4.3□□□□□ -1.72
UBFD1-204ENST00000565634 TXNDC17Q9BRA2 123 aa4.3□□□□□ -1.72
UBFD1-204ENST00000565634 TMEM208Q9BTX3 173 aa4.3□□□□□ -1.72
UBFD1-204ENST00000565634 NOP10Q9NPE3 64 aaKnown RBP4.3□□□□□ -1.72
UBFD1-204ENST00000565634 Q9UF83 564 aa4.3□□□□□ -1.72
UBFD1-204ENST00000565634 IGHV4-4A0A075B6R2 117 aa4.29□□□□□ -1.72
UBFD1-204ENST00000565634 TRAV21A0A0B4J279 112 aa4.29□□□□□ -1.72
UBFD1-204ENST00000565634 B4DEV8 164 aa4.29□□□□□ -1.72
UBFD1-204ENST00000565634 C9JCJ5 164 aa4.29□□□□□ -1.72
UBFD1-204ENST00000565634 H7BYZ3 331 aa4.29□□□□□ -1.72
UBFD1-204ENST00000565634 AMBPP02760 352 aa4.29□□□□□ -1.72
UBFD1-204ENST00000565634 S100A9P06702 114 aaKnown RBP4.29□□□□□ -1.72
UBFD1-204ENST00000565634 PFN1P07737 140 aaKnown RBP4.29□□□□□ -1.72
UBFD1-204ENST00000565634 TAGLN2P37802 199 aaKnown RBP4.29□□□□□ -1.72
UBFD1-204ENST00000565634 FOXA3P55318 350 aaPredicted RBP4.29□□□□□ -1.72
UBFD1-204ENST00000565634 C10orf91Q5T1B1 145 aa4.29□□□□□ -1.72
UBFD1-204ENST00000565634 FAM162BQ5T6X4 162 aa4.29□□□□□ -1.72
UBFD1-204ENST00000565634 FAM222AQ5U5X8 452 aa4.29□□□□□ -1.72
UBFD1-204ENST00000565634 ATRAIDQ6UW56 229 aa4.29□□□□□ -1.72
UBFD1-204ENST00000565634 Q6ZTI0 123 aa4.29□□□□□ -1.72
UBFD1-204ENST00000565634 Q75L30 129 aa4.29□□□□□ -1.72
UBFD1-204ENST00000565634 EIF4E3Q8N5X7 224 aaKnown RBP4.29□□□□□ -1.72
UBFD1-204ENST00000565634 GTSF1Q8WW33 167 aa4.29□□□□□ -1.72
UBFD1-204ENST00000565634 TCEAL7Q9BRU2 100 aa4.29□□□□□ -1.72
UBFD1-204ENST00000565634 NIPSNAP3BQ9BS92 247 aa4.29□□□□□ -1.72
UBFD1-204ENST00000565634 MRPL16Q9NX20 251 aaKnown RBP4.29□□□□□ -1.72
UBFD1-204ENST00000565634 TP53TG1Q9Y2A0 90 aa4.29□□□□□ -1.72
UBFD1-204ENST00000565634 GOLT1BQ9Y3E0 138 aa4.29□□□□□ -1.72
UBFD1-204ENST00000565634 TMEM189A5PLL7 270 aa4.28□□□□□ -1.72
UBFD1-204ENST00000565634 ARMS2P0C7Q2 107 aa4.28□□□□□ -1.72
UBFD1-204ENST00000565634 DEFB130BP0DP73 79 aa4.28□□□□□ -1.72
UBFD1-204ENST00000565634 DEFB130AP0DP74 79 aa4.28□□□□□ -1.72
UBFD1-204ENST00000565634 ADIRFQ15847 76 aa4.28□□□□□ -1.72
UBFD1-204ENST00000565634 RRN3P1Q2M238 152 aa4.28□□□□□ -1.72
UBFD1-204ENST00000565634 TDRG1Q3Y452 100 aa4.28□□□□□ -1.72
UBFD1-204ENST00000565634 Q5VSD8 79 aa4.28□□□□□ -1.72
UBFD1-204ENST00000565634 SPATA12Q7Z6I5 190 aa4.28□□□□□ -1.72
UBFD1-204ENST00000565634 OR2D3Q8NGH3 330 aa4.28□□□□□ -1.72
UBFD1-204ENST00000565634 ISOC2Q96AB3 205 aa4.28□□□□□ -1.72
UBFD1-204ENST00000565634 C9orf85Q96MD7 179 aa4.28□□□□□ -1.72
UBFD1-204ENST00000565634 PYGO2Q9BRQ0 406 aa4.28□□□□□ -1.72
UBFD1-204ENST00000565634 LINC00467Q9BRT7 94 aa4.28□□□□□ -1.72
UBFD1-204ENST00000565634 NDFIP1Q9BT67 221 aa4.28□□□□□ -1.72
UBFD1-204ENST00000565634 C1QTNF4Q9BXJ3 329 aa4.28□□□□□ -1.72
UBFD1-204ENST00000565634 SAMD10Q9BYL1 202 aa4.28□□□□□ -1.72
UBFD1-204ENST00000565634 NAT8Q9UHE5 227 aa4.28□□□□□ -1.72
UBFD1-204ENST00000565634 V9GYV3 84 aa4.28□□□□□ -1.72
UBFD1-204ENST00000565634 FAT1Q14517 4588 aa4.28□□□□□ -1.72
UBFD1-204ENST00000565634 SMIM9A6NGZ8 99 aa4.27□□□□□ -1.73
UBFD1-204ENST00000565634 H3BVH4 76 aa4.27□□□□□ -1.73
UBFD1-204ENST00000565634 SPINK4O60575 86 aa4.27□□□□□ -1.73
UBFD1-204ENST00000565634 NDUFS6O75380 124 aaKnown RBP4.27□□□□□ -1.73
UBFD1-204ENST00000565634 GAGE7O76087 117 aa4.27□□□□□ -1.73
UBFD1-204ENST00000565634 IGHV3-53P01767 116 aa4.27□□□□□ -1.73
UBFD1-204ENST00000565634 GAGE12FP0CL80 117 aa4.27□□□□□ -1.73
UBFD1-204ENST00000565634 GAGE12GP0CL81 117 aa4.27□□□□□ -1.73
UBFD1-204ENST00000565634 GAGE12IP0CL82 117 aa4.27□□□□□ -1.73
UBFD1-204ENST00000565634 MIFP14174 115 aa4.27□□□□□ -1.73
UBFD1-204ENST00000565634 TCL1AP56279 114 aa4.27□□□□□ -1.73
UBFD1-204ENST00000565634 LGALS9BQ3B8N2 356 aa4.27□□□□□ -1.73
UBFD1-204ENST00000565634 C1orf134Q5TEV5 83 aa4.27□□□□□ -1.73
UBFD1-204ENST00000565634 LYZL1Q6UWQ5 148 aa4.27□□□□□ -1.73
UBFD1-204ENST00000565634 FAM159AQ6UWV7 190 aa4.27□□□□□ -1.73
UBFD1-204ENST00000565634 Q6ZR54 194 aa4.27□□□□□ -1.73
UBFD1-204ENST00000565634 Q6ZTC4 211 aa4.27□□□□□ -1.73
UBFD1-204ENST00000565634 TMEM256Q8N2U0 113 aa4.27□□□□□ -1.73
UBFD1-204ENST00000565634 OR10AG1Q8NH19 301 aa4.27□□□□□ -1.73
UBFD1-204ENST00000565634 SMDT1Q9H4I9 107 aa4.27□□□□□ -1.73
UBFD1-204ENST00000565634 DNAH5Q8TE73 4624 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms