RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 Q6AWC8 147 aa1.07□□□□□ -2.24
UBR1-205ENST00000564540 SLC48A1Q6P1K1 146 aa1.07□□□□□ -2.24
UBR1-205ENST00000564540 C10orf105Q8TEF2 133 aa1.07□□□□□ -2.24
UBR1-205ENST00000564540 IFI27L1Q96BM0 104 aa1.07□□□□□ -2.24
UBR1-205ENST00000564540 TCEAL7Q9BRU2 100 aa1.07□□□□□ -2.24
UBR1-205ENST00000564540 A2ML1A8K2U0 1454 aa1.06□□□□□ -2.24
UBR1-205ENST00000564540 TET1Q8NFU7 2136 aa1.06□□□□□ -2.24
UBR1-205ENST00000564540 LOC101927531A0A1B0GV80 90 aa1.06□□□□□ -2.24
UBR1-205ENST00000564540 HIGD1CA8MV81 97 aa1.06□□□□□ -2.24
UBR1-205ENST00000564540 APOC4-APOC2K7ER74 178 aa1.06□□□□□ -2.24
UBR1-205ENST00000564540 TNFP01375 233 aa1.06□□□□□ -2.24
UBR1-205ENST00000564540 APOC2P02655 101 aa1.06□□□□□ -2.24
UBR1-205ENST00000564540 TPPP2P59282 170 aa1.06□□□□□ -2.24
UBR1-205ENST00000564540 PPP3R1P63098 170 aa1.06□□□□□ -2.24
UBR1-205ENST00000564540 CATR1Q13166 79 aa1.06□□□□□ -2.24
UBR1-205ENST00000564540 DEFB132Q7Z7B7 95 aa1.06□□□□□ -2.24
UBR1-205ENST00000564540 DEFB119Q8N690 84 aa1.06□□□□□ -2.24
UBR1-205ENST00000564540 Q8N8P6 123 aa1.06□□□□□ -2.24
UBR1-205ENST00000564540 TSKUQ8WUA8 353 aa1.06□□□□□ -2.24
UBR1-205ENST00000564540 MRPL35Q9NZE8 188 aaKnown RBP1.06□□□□□ -2.24
UBR1-205ENST00000564540 IER3IP1Q9Y5U9 82 aa1.06□□□□□ -2.24
UBR1-205ENST00000564540 QRICH2Q9H0J4 1663 aa1.06□□□□□ -2.24
UBR1-205ENST00000564540 MUC22E2RYF6 1773 aaPredicted RBP1.06□□□□□ -2.24
UBR1-205ENST00000564540 NBDYA0A0U1RRE5 68 aa1.05□□□□□ -2.24
UBR1-205ENST00000564540 OOSP1A8MZH6 123 aa1.05□□□□□ -2.24
UBR1-205ENST00000564540 RBP2P50120 134 aa1.05□□□□□ -2.24
UBR1-205ENST00000564540 NPC2P61916 151 aa1.05□□□□□ -2.24
UBR1-205ENST00000564540 INSL4Q14641 139 aa1.05□□□□□ -2.24
UBR1-205ENST00000564540 MRPL54Q6P161 138 aaKnown RBP1.05□□□□□ -2.24
UBR1-205ENST00000564540 C10orf82Q8WW14 230 aa1.05□□□□□ -2.24
UBR1-205ENST00000564540 COA4Q9NYJ1 87 aa1.05□□□□□ -2.24
UBR1-205ENST00000564540 MYOM2P54296 1465 aa1.05□□□□□ -2.24
UBR1-205ENST00000564540 BCORL1Q5H9F3 1711 aa1.04□□□□□ -2.24
UBR1-205ENST00000564540 TRAV12-3A0A0B4J271 114 aa1.04□□□□□ -2.24
UBR1-205ENST00000564540 TCRBV3S1A0A5B6 114 aa1.04□□□□□ -2.24
UBR1-205ENST00000564540 CBLN1P23435 193 aa1.04□□□□□ -2.24
UBR1-205ENST00000564540 RBM3P98179 157 aaKnown RBP1.04□□□□□ -2.24
UBR1-205ENST00000564540 NDUFA11Q86Y39 141 aa1.04□□□□□ -2.24
UBR1-205ENST00000564540 PPP3R2Q96LZ3 170 aa1.04□□□□□ -2.24
UBR1-205ENST00000564540 AMELYQ99218 206 aa1.04□□□□□ -2.24
UBR1-205ENST00000564540 MRPL57Q9BQC6 102 aaKnown RBP1.04□□□□□ -2.24
UBR1-205ENST00000564540 PZPP20742 1482 aa1.04□□□□□ -2.24
UBR1-205ENST00000564540 E9PCH4 1651 aa1.04□□□□□ -2.24
UBR1-205ENST00000564540 CUL7Q14999 1698 aa1.04□□□□□ -2.24
UBR1-205ENST00000564540 A6NIN4 97 aa1.03□□□□□ -2.24
UBR1-205ENST00000564540 ANGP03950 147 aaKnown RBP1.03□□□□□ -2.24
UBR1-205ENST00000564540 SMIM6P0DI80 62 aa1.03□□□□□ -2.24
UBR1-205ENST00000564540 LYNX1P0DP58 116 aa1.03□□□□□ -2.24
UBR1-205ENST00000564540 FXYD3Q14802 87 aa1.03□□□□□ -2.24
UBR1-205ENST00000564540 C9orf153Q5TBE3 101 aa1.03□□□□□ -2.24
UBR1-205ENST00000564540 RPL7L1Q6DKI1 246 aaKnown RBP1.03□□□□□ -2.24
UBR1-205ENST00000564540 XAF1Q6GPH4 301 aa1.03□□□□□ -2.24
UBR1-205ENST00000564540 SPTSSBQ8NFR3 76 aa1.03□□□□□ -2.24
UBR1-205ENST00000564540 LINC00208Q96KT6 92 aa1.03□□□□□ -2.24
UBR1-205ENST00000564540 DSCR8Q96T75 97 aa1.03□□□□□ -2.24
UBR1-205ENST00000564540 RPRMQ9NS64 109 aa1.03□□□□□ -2.24
UBR1-205ENST00000564540 LAMB1P07942 1786 aa1.02□□□□□ -2.25
UBR1-205ENST00000564540 HSD52Q0P140 79 aa1.02□□□□□ -2.25
UBR1-205ENST00000564540 C12orf73Q69YU5 71 aa1.02□□□□□ -2.25
UBR1-205ENST00000564540 KTN1Q86UP2 1357 aaKnown RBP1.02□□□□□ -2.25
UBR1-205ENST00000564540 C5orf56Q8N8D9 126 aa1.02□□□□□ -2.25
UBR1-205ENST00000564540 CDK12Q9NYV4 1490 aaPredicted RBP1.02□□□□□ -2.25
UBR1-205ENST00000564540 TENM3Q9P273 2699 aa1.02□□□□□ -2.25
UBR1-205ENST00000564540 CACNA1BQ00975 2339 aa1.01□□□□□ -2.25
UBR1-205ENST00000564540 RBBP6Q7Z6E9 1792 aaKnown RBP1.01□□□□□ -2.25
UBR1-205ENST00000564540 DAPK1P53355 1430 aa1.01□□□□□ -2.25
UBR1-205ENST00000564540 NCR3O14931 201 aa1.01□□□□□ -2.25
UBR1-205ENST00000564540 EFNA4P52798 201 aa1.01□□□□□ -2.25
UBR1-205ENST00000564540 CCL19Q99731 98 aa1.01□□□□□ -2.25
UBR1-205ENST00000564540 ZGRF1Q86YA3 2104 aa1.01□□□□□ -2.25
UBR1-205ENST00000564540 DLEC1Q9Y238 1755 aa1.01□□□□□ -2.25
UBR1-205ENST00000564540 IFT140Q96RY7 1462 aa1□□□□□ -2.25
UBR1-205ENST00000564540 NCOA6Q14686 2063 aaPredicted RBP1□□□□□ -2.25
UBR1-205ENST00000564540 TRBV10-3A0A0K0K1G6 114 aa1□□□□□ -2.25
UBR1-205ENST00000564540 TEX49A0A1B0GTD5 131 aa1□□□□□ -2.25
UBR1-205ENST00000564540 HCG22E2RYF7 251 aa1□□□□□ -2.25
UBR1-205ENST00000564540 IFITM1P13164 125 aa1□□□□□ -2.25
UBR1-205ENST00000564540 UBE2D1P51668 147 aa1□□□□□ -2.25
UBR1-205ENST00000564540 Q6ZQY7 126 aa1□□□□□ -2.25
UBR1-205ENST00000564540 CYP2G1PQ6ZSU1 146 aa1□□□□□ -2.25
UBR1-205ENST00000564540 GTF2H5Q6ZYL4 71 aa1□□□□□ -2.25
UBR1-205ENST00000564540 C8orf59Q8N0T1 100 aaPredicted RBP1□□□□□ -2.25
UBR1-205ENST00000564540 SVBPQ8N300 66 aa1□□□□□ -2.25
UBR1-205ENST00000564540 SPANXDQ9BXN6 97 aa1□□□□□ -2.25
UBR1-205ENST00000564540 RREB1Q92766 1687 aa1□□□□□ -2.25
UBR1-205ENST00000564540 CITO14578 2027 aa0.99□□□□□ -2.25
UBR1-205ENST00000564540 PEAK1Q9H792 1746 aa0.99□□□□□ -2.25
UBR1-205ENST00000564540 TRAV30A0A087WSZ9 112 aa0.99□□□□□ -2.25
UBR1-205ENST00000564540 TMEM218A2RU14 115 aa0.99□□□□□ -2.25
UBR1-205ENST00000564540 CLPSL1A2RUU4 121 aa0.99□□□□□ -2.25
UBR1-205ENST00000564540 IFNA17P01571 189 aa0.99□□□□□ -2.25
UBR1-205ENST00000564540 SPINK8P0C7L1 97 aa0.99□□□□□ -2.25
UBR1-205ENST00000564540 CCL8P80075 99 aa0.99□□□□□ -2.25
UBR1-205ENST00000564540 ZNF56Q15929 161 aa0.99□□□□□ -2.25
UBR1-205ENST00000564540 C5orf38Q86SI9 138 aa0.99□□□□□ -2.25
UBR1-205ENST00000564540 Q86TA4 180 aa0.99□□□□□ -2.25
UBR1-205ENST00000564540 C20orf197Q8N268 126 aa0.99□□□□□ -2.25
UBR1-205ENST00000564540 DPH3P1Q9H4G8 78 aa0.99□□□□□ -2.25
UBR1-205ENST00000564540 ZNF142P52746 1687 aaPredicted RBP0.99□□□□□ -2.25
UBR1-205ENST00000564540 ROBO1Q9Y6N7 1651 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 175.8 ms