RNA–Protein interactions for RNA: ENST00000563428.5

TAF1C-208, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, human

TSL 2

Gene TAF1C, Length 2,531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1C-208	ENST00000563428	C9orf47	Q6ZRZ4	202 aa		12.4	□□□□□ -0.42
TAF1C-208	ENST00000563428	DUX3	Q96PT4	197 aa		12.4	□□□□□ -0.42
TAF1C-208	ENST00000563428	ESM1	Q9NQ30	184 aa		12.4	□□□□□ -0.42
TAF1C-208	ENST00000563428		K7EMI3	77 aa		12.39	□□□□□ -0.43
TAF1C-208	ENST00000563428	ELANE	P08246	267 aa		12.39	□□□□□ -0.43
TAF1C-208	ENST00000563428	HIVEP2	P31629	2446 aa		12.39	□□□□□ -0.43
TAF1C-208	ENST00000563428	OTOG	Q6ZRI0	2925 aa		12.39	□□□□□ -0.43
TAF1C-208	ENST00000563428	C11orf44	Q8N8P7	122 aa		12.39	□□□□□ -0.43
TAF1C-208	ENST00000563428	IGLL5	B9A064	214 aa		12.38	□□□□□ -0.43
TAF1C-208	ENST00000563428	LGALS1	P09382	135 aa	Known RBP	12.38	□□□□□ -0.43
TAF1C-208	ENST00000563428	LAGE3	Q14657	143 aa		12.38	□□□□□ -0.43
TAF1C-208	ENST00000563428	TMEM89	A2RUT3	159 aa		12.38	□□□□□ -0.43
TAF1C-208	ENST00000563428	SOCS3	O14543	225 aa		12.38	□□□□□ -0.43
TAF1C-208	ENST00000563428	HOXD3	P31249	432 aa	Predicted RBP	12.38	□□□□□ -0.43
TAF1C-208	ENST00000563428	MYOZ3	Q8TDC0	251 aa		12.38	□□□□□ -0.43
TAF1C-208	ENST00000563428		A0A087WX48	190 aa		12.37	□□□□□ -0.43
TAF1C-208	ENST00000563428	UBE2E2	Q96LR5	201 aa		12.37	□□□□□ -0.43
TAF1C-208	ENST00000563428	TAL2	Q16559	108 aa		12.37	□□□□□ -0.43
TAF1C-208	ENST00000563428	SPANXN1	Q5VSR9	72 aa		12.36	□□□□□ -0.43
TAF1C-208	ENST00000563428	FOXI2	Q6ZQN5	318 aa		12.36	□□□□□ -0.43
TAF1C-208	ENST00000563428		Q6ZSV7	163 aa		12.36	□□□□□ -0.43
TAF1C-208	ENST00000563428	NIPBL	Q6KC79	2804 aa	eCLIP	12.36	□□□□□ -0.43
TAF1C-208	ENST00000563428	SLURP1	P55000	103 aa		12.36	□□□□□ -0.43
TAF1C-208	ENST00000563428	C12orf74	Q32Q52	190 aa		12.36	□□□□□ -0.43
TAF1C-208	ENST00000563428	TCTEX1D4	Q5JR98	221 aa		12.36	□□□□□ -0.43
TAF1C-208	ENST00000563428	MRPL53	Q96EL3	112 aa	Known RBP	12.36	□□□□□ -0.43
TAF1C-208	ENST00000563428	IGHV4-4	A0A075B6R2	117 aa		12.35	□□□□□ -0.43
TAF1C-208	ENST00000563428		K7EMT4	169 aa		12.35	□□□□□ -0.43
TAF1C-208	ENST00000563428		Q8N2B8	174 aa		12.35	□□□□□ -0.43
TAF1C-208	ENST00000563428	ZFAND2A	Q8N6M9	145 aa		12.35	□□□□□ -0.43
TAF1C-208	ENST00000563428	WFDC2	Q14508	124 aa		12.35	□□□□□ -0.43
TAF1C-208	ENST00000563428	WFDC12	Q8WWY7	111 aa		12.35	□□□□□ -0.43
TAF1C-208	ENST00000563428	SPANXB1	Q9NS25	103 aa	Predicted RBP	12.34	□□□□□ -0.43
TAF1C-208	ENST00000563428	ZNF479	Q96JC4	524 aa		12.34	□□□□□ -0.43
TAF1C-208	ENST00000563428		F8W1H4	67 aa		12.33	□□□□□ -0.44
TAF1C-208	ENST00000563428		M0R381	172 aa		12.33	□□□□□ -0.44
TAF1C-208	ENST00000563428	OR10J6P	Q8NGY7	276 aa		12.33	□□□□□ -0.44
TAF1C-208	ENST00000563428	TRBV7-3	A0A075B6L6	115 aa		12.33	□□□□□ -0.44
TAF1C-208	ENST00000563428	PLN	P26678	52 aa		12.33	□□□□□ -0.44
TAF1C-208	ENST00000563428	SAMD13	Q5VXD3	122 aa		12.33	□□□□□ -0.44
TAF1C-208	ENST00000563428	TEX29	Q8N6K0	151 aa		12.33	□□□□□ -0.44
TAF1C-208	ENST00000563428	OR11H1	Q8NG94	326 aa		12.33	□□□□□ -0.44
TAF1C-208	ENST00000563428	RPL39L	Q96EH5	51 aa	Known RBP	12.33	□□□□□ -0.44
TAF1C-208	ENST00000563428	SETX	Q7Z333	2677 aa	Known RBP	12.33	□□□□□ -0.44
TAF1C-208	ENST00000563428	AGRN	O00468	2067 aa		12.32	□□□□□ -0.44
TAF1C-208	ENST00000563428	RNF152	Q8N8N0	203 aa		12.32	□□□□□ -0.44
TAF1C-208	ENST00000563428	TRAV12-1	A0A0B4J245	112 aa		12.32	□□□□□ -0.44
TAF1C-208	ENST00000563428		A0A1W2PRX2	142 aa		12.32	□□□□□ -0.44
TAF1C-208	ENST00000563428	ZNF688	P0C7X2	276 aa		12.32	□□□□□ -0.44
TAF1C-208	ENST00000563428	TMEM86B	Q8N661	226 aa		12.32	□□□□□ -0.44
TAF1C-208	ENST00000563428	DCANP1	Q8TF63	244 aa		12.32	□□□□□ -0.44
TAF1C-208	ENST00000563428	RASL10A	Q92737	203 aa		12.32	□□□□□ -0.44
TAF1C-208	ENST00000563428	KLHL30-AS1	Q8NEE0	82 aa		12.31	□□□□□ -0.44
TAF1C-208	ENST00000563428	HIST1H4G	Q99525	98 aa		12.31	□□□□□ -0.44
TAF1C-208	ENST00000563428		F8VRH5	84 aa		12.31	□□□□□ -0.44
TAF1C-208	ENST00000563428	LINC01619	G3V211	115 aa		12.31	□□□□□ -0.44
TAF1C-208	ENST00000563428	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	12.31	□□□□□ -0.44
TAF1C-208	ENST00000563428		H7C1H1	209 aa		12.31	□□□□□ -0.44
TAF1C-208	ENST00000563428	GNRH2	O43555	120 aa		12.31	□□□□□ -0.44
TAF1C-208	ENST00000563428	ANXA2R	Q3ZCQ2	193 aa		12.31	□□□□□ -0.44
TAF1C-208	ENST00000563428	C14orf178	Q8N769	122 aa	Predicted RBP	12.31	□□□□□ -0.44
TAF1C-208	ENST00000563428	SMIM2	Q9BVW6	85 aa		12.31	□□□□□ -0.44
TAF1C-208	ENST00000563428		A0A1B0GWB2	263 aa		12.3	□□□□□ -0.44
TAF1C-208	ENST00000563428		H3BMG7	143 aa		12.3	□□□□□ -0.44
TAF1C-208	ENST00000563428	AZU1	P20160	251 aa		12.3	□□□□□ -0.44
TAF1C-208	ENST00000563428	RRN3P1	Q2M238	152 aa		12.3	□□□□□ -0.44
TAF1C-208	ENST00000563428	DEFB104A	Q8WTQ1	72 aa		12.3	□□□□□ -0.44
TAF1C-208	ENST00000563428	MRAP2	Q96G30	205 aa		12.3	□□□□□ -0.44
TAF1C-208	ENST00000563428	OVOL1	O14753	267 aa		12.3	□□□□□ -0.44
TAF1C-208	ENST00000563428	TSSC4	Q9Y5U2	329 aa	Predicted RBP	12.3	□□□□□ -0.44
TAF1C-208	ENST00000563428	FLNB	O75369	2602 aa	Known RBP	12.29	□□□□□ -0.44
TAF1C-208	ENST00000563428	IGKV3-20	P01619	116 aa		12.29	□□□□□ -0.44
TAF1C-208	ENST00000563428	RNASE4	P34096	147 aa	Known RBP	12.29	□□□□□ -0.44
TAF1C-208	ENST00000563428	CD300E	Q496F6	205 aa	Predicted RBP	12.29	□□□□□ -0.44
TAF1C-208	ENST00000563428	AMTN	Q6UX39	209 aa		12.29	□□□□□ -0.44
TAF1C-208	ENST00000563428	SIGMAR1	Q99720	223 aa		12.29	□□□□□ -0.44
TAF1C-208	ENST00000563428	GTSF1L	Q9H1H1	148 aa		12.29	□□□□□ -0.44
TAF1C-208	ENST00000563428	PRO0461	Q9UI25	63 aa		12.29	□□□□□ -0.44
TAF1C-208	ENST00000563428	MUC4	Q99102	2169 aa		12.29	□□□□□ -0.44
TAF1C-208	ENST00000563428	SH2D6	Q7Z4S9	175 aa		12.29	□□□□□ -0.44
TAF1C-208	ENST00000563428	MYMX	A0A1B0GTQ4	84 aa		12.28	□□□□□ -0.44
TAF1C-208	ENST00000563428	SCGB1A1	P11684	91 aa		12.28	□□□□□ -0.44
TAF1C-208	ENST00000563428	LINC00477	Q96M19	166 aa		12.28	□□□□□ -0.44
TAF1C-208	ENST00000563428	CHTOP	Q9Y3Y2	248 aa	Known RBP	12.28	□□□□□ -0.44
TAF1C-208	ENST00000563428	GAGE12H	A6NDE8	117 aa		12.28	□□□□□ -0.44
TAF1C-208	ENST00000563428	ID1	P41134	155 aa		12.28	□□□□□ -0.44
TAF1C-208	ENST00000563428	TOMM6	Q96B49	74 aa		12.28	□□□□□ -0.44
TAF1C-208	ENST00000563428	SPAG8	Q99932	426 aa	Predicted RBP	12.28	□□□□□ -0.44
TAF1C-208	ENST00000563428	LGALS9	O00182	355 aa		12.27	□□□□□ -0.45
TAF1C-208	ENST00000563428	NEXN-AS1	Q8NBZ9	246 aa		12.27	□□□□□ -0.45
TAF1C-208	ENST00000563428	FAM19A4	Q96LR4	140 aa		12.27	□□□□□ -0.45
TAF1C-208	ENST00000563428	OR11H12	B2RN74	326 aa		12.27	□□□□□ -0.45
TAF1C-208	ENST00000563428	RNASE3	P12724	160 aa	Known RBP	12.27	□□□□□ -0.45
TAF1C-208	ENST00000563428	ETDB	Q3ZM63	59 aa		12.27	□□□□□ -0.45
TAF1C-208	ENST00000563428	OR11H2	Q8NH07	326 aa		12.27	□□□□□ -0.45
TAF1C-208	ENST00000563428	SCGB3A1	Q96QR1	104 aa		12.27	□□□□□ -0.45
TAF1C-208	ENST00000563428	MGP	P08493	103 aa		12.26	□□□□□ -0.45
TAF1C-208	ENST00000563428	ORMDL2	Q53FV1	153 aa		12.26	□□□□□ -0.45
TAF1C-208	ENST00000563428	C4orf3	Q8WVX3	66 aa		12.26	□□□□□ -0.45
TAF1C-208	ENST00000563428	DLX4	Q92988	240 aa	Predicted RBP	12.26	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms