RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 TMEM69Q5SWH9 247 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 Q6ZSA8 131 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 IQCF2Q8IXL9 164 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 OR8I2Q8N0Y5 310 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 ZNF680Q8NEM1 530 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 SMIM8Q96KF7 97 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 ODF3Q96PU9 254 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 LINC01587Q99440 93 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 TRGV9Q99603 122 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 VCX3BQ9H321 246 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 TXNL4BQ9NX01 149 aaKnown RBP2.04□□□□□ -2.08
HERC1-215ENST00000561436 ZNF586Q9NXT0 402 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 VPS13DQ5THJ4 4388 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 FAT2Q9NYQ8 4349 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 SMIM31A0A1B0GVY4 71 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 CXorf1O96002 111 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 IGKV1-39P01597 117 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 IGKV1-5P01602 117 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 ORM1P02763 201 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 IGKV1D-39P04432 117 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 SEC11BP0C7V7 166 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 SLC25A6P12236 298 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 AKR1C2P52895 323 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 PIGPP57054 158 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 GABARAPL2P60520 117 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 SSBP1Q04837 148 aaKnown RBP2.03□□□□□ -2.08
HERC1-215ENST00000561436 OR2F1Q13607 317 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 UBE2NLQ5JXB2 153 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 IBA57Q5T440 356 aaKnown RBP2.03□□□□□ -2.08
HERC1-215ENST00000561436 FAM104BQ5XKR9 115 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 DAZ4Q86SG3 579 aaKnown RBP2.03□□□□□ -2.08
HERC1-215ENST00000561436 LHFPL1Q86WI0 220 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 OR8A1Q8NGG7 326 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 TERB2Q8NHR7 220 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 RBPMSQ93062 196 aaKnown RBP2.03□□□□□ -2.08
HERC1-215ENST00000561436 GPR146Q96CH1 333 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 CIB3Q96Q77 187 aaPredicted RBP2.03□□□□□ -2.08
HERC1-215ENST00000561436 SEC22CQ9BRL7 303 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 SLC50A1Q9BRV3 221 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 SLC35B3Q9H1N7 401 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 COPZ2Q9P299 210 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 PRO0255Q9UI72 69 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 ICOSQ9Y6W8 199 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 LY96Q9Y6Y9 160 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 TMEM56-RWDD3S4R434 201 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 HSPG2P98160 4391 aa2.03□□□□□ -2.08
HERC1-215ENST00000561436 DNAH10Q8IVF4 4471 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 DNAH2Q9P225 4427 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 DYNC1H1Q14204 4646 aaKnown RBP2.02□□□□□ -2.09
HERC1-215ENST00000561436 TRGV2A0A075B6R0 118 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 A0A096LPF7 62 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 DUXBA0A1W2PPF3 345 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 CEBPZOSA8MTT3 80 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 FNDC10F2Z333 226 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 K7EPK0 472 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 PMP2P02689 132 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 OR5AC1P0C628 307 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 AKR1C4P17516 323 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 SDC2P34741 201 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 RBX1P62877 108 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 MRPS10P82664 201 aaKnown RBP2.02□□□□□ -2.09
HERC1-215ENST00000561436 PSG3Q16557 428 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 GUK1Q16774 197 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 SPINK13Q1W4C9 94 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 GDF5OSQ5U4N7 250 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 LYPD5Q6UWN5 251 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 Q8N814 137 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 RNASE11Q8TAA1 199 aaKnown RBP2.02□□□□□ -2.09
HERC1-215ENST00000561436 PPP1R14BQ96C90 147 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 TXNDC17Q9BRA2 123 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 TMEM147Q9BVK8 224 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 FXYD6Q9H0Q3 95 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 TMEM222Q9H0R3 208 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 NOP10Q9NPE3 64 aaKnown RBP2.02□□□□□ -2.09
HERC1-215ENST00000561436 MRPL36Q9P0J6 103 aaKnown RBP2.02□□□□□ -2.09
HERC1-215ENST00000561436 PKHD1P08F94 4074 aa2.02□□□□□ -2.09
HERC1-215ENST00000561436 SORL1Q92673 2214 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 IGKV1D-37A0A075B6S9 117 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 LOC100506127A0A0U1RQW1 187 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 IBA57-AS1B1ANH7 110 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 PSCAO43653 123 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 SPINK4O60575 86 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 HYPMO75409 117 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 TNFAIP8O95379 198 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 SLC25A5P05141 298 aaKnown RBP2.01□□□□□ -2.09
HERC1-215ENST00000561436 SULT1A3P0DMM9 295 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 SULT1A4P0DMN0 295 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 PTHLHP12272 177 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 CXCL3P19876 107 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 FXYD7P58549 80 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 RHOBP62745 196 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 SMCO1Q147U7 214 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 RNASE10Q5GAN6 216 aaKnown RBP2.01□□□□□ -2.09
HERC1-215ENST00000561436 LINC01556Q5JQF7 62 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 LCN15Q6UWW0 184 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 Q6ZRU5 148 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 TMED4Q7Z7H5 227 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms