RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 Q6ZWC4 215 aa12.45□□□□□ -0.42
HDDC3-206ENST00000561036 FAM19A2Q8N3H0 131 aa12.45□□□□□ -0.42
HDDC3-206ENST00000561036 C20orf78Q9BR46 151 aa12.45□□□□□ -0.42
HDDC3-206ENST00000561036 LOC389332A0A1B0GUA5 103 aa12.44□□□□□ -0.42
HDDC3-206ENST00000561036 IGLL1P15814 213 aa12.44□□□□□ -0.42
HDDC3-206ENST00000561036 JMJD1CQ15652 2540 aa12.44□□□□□ -0.42
HDDC3-206ENST00000561036 IGHV1-24A0A0C4DH33 117 aa12.43□□□□□ -0.42
HDDC3-206ENST00000561036 A8MWV9 139 aa12.43□□□□□ -0.42
HDDC3-206ENST00000561036 GAS8-AS1O95177 125 aa12.43□□□□□ -0.42
HDDC3-206ENST00000561036 CRYGDP07320 174 aa12.43□□□□□ -0.42
HDDC3-206ENST00000561036 GATA1P15976 413 aaPredicted RBP12.43□□□□□ -0.42
HDDC3-206ENST00000561036 Q8N8P6 123 aa12.43□□□□□ -0.42
HDDC3-206ENST00000561036 CSNK1G2-AS1Q8NCQ2 148 aa12.43□□□□□ -0.42
HDDC3-206ENST00000561036 TMEM263Q8WUH6 116 aaKnown RBP12.43□□□□□ -0.42
HDDC3-206ENST00000561036 CSTL1Q9H114 145 aa12.43□□□□□ -0.42
HDDC3-206ENST00000561036 TEP1Q99973 2627 aaKnown RBP12.42□□□□□ -0.42
HDDC3-206ENST00000561036 TRAV26-2A0A0B4J265 109 aa12.42□□□□□ -0.42
HDDC3-206ENST00000561036 IL17DQ8TAD2 202 aa12.42□□□□□ -0.42
HDDC3-206ENST00000561036 RASL10AQ92737 203 aa12.42□□□□□ -0.42
HDDC3-206ENST00000561036 JPT2Q9H910 190 aa12.42□□□□□ -0.42
HDDC3-206ENST00000561036 RPL32P62910 135 aaKnown RBP12.41□□□□□ -0.42
HDDC3-206ENST00000561036 ZNF705AQ6ZN79 300 aaPredicted RBP12.41□□□□□ -0.42
HDDC3-206ENST00000561036 RNASE8Q8TDE3 154 aaKnown RBP12.41□□□□□ -0.42
HDDC3-206ENST00000561036 NIPBLQ6KC79 2804 aaeCLIP12.4□□□□□ -0.42
HDDC3-206ENST00000561036 IGLV2-18A0A075B6J9 118 aa12.4□□□□□ -0.42
HDDC3-206ENST00000561036 IGHV3OR16-12A0A075B7B8 117 aa12.4□□□□□ -0.42
HDDC3-206ENST00000561036 A0A087WWL8 130 aa12.4□□□□□ -0.42
HDDC3-206ENST00000561036 KIR2DL5BA0A0G2JN68 375 aa12.4□□□□□ -0.42
HDDC3-206ENST00000561036 KIR2DL5BA0A0G2JPC4 375 aa12.4□□□□□ -0.42
HDDC3-206ENST00000561036 PRM2P04554 102 aa12.4□□□□□ -0.42
HDDC3-206ENST00000561036 AZU1P20160 251 aa12.4□□□□□ -0.42
HDDC3-206ENST00000561036 KIR2DL5AQ8N109 375 aa12.4□□□□□ -0.42
HDDC3-206ENST00000561036 KIR2DL5BQ8NHK3 375 aa12.4□□□□□ -0.42
HDDC3-206ENST00000561036 C16orf74Q96GX8 76 aa12.4□□□□□ -0.42
HDDC3-206ENST00000561036 EDA2RQ9HAV5 297 aa12.4□□□□□ -0.42
HDDC3-206ENST00000561036 ZMAT5Q9UDW3 170 aaKnown RBP12.4□□□□□ -0.42
HDDC3-206ENST00000561036 HSPB8Q9UJY1 196 aa12.4□□□□□ -0.42
HDDC3-206ENST00000561036 F5H697 171 aa12.39□□□□□ -0.43
HDDC3-206ENST00000561036 K7EMI3 77 aa12.39□□□□□ -0.43
HDDC3-206ENST00000561036 LEPROTL1O95214 131 aa12.39□□□□□ -0.43
HDDC3-206ENST00000561036 SUMO2P61956 95 aaKnown RBP12.39□□□□□ -0.43
HDDC3-206ENST00000561036 SUMO4Q6EEV6 95 aa12.39□□□□□ -0.43
HDDC3-206ENST00000561036 SMIM2Q9BVW6 85 aa12.39□□□□□ -0.43
HDDC3-206ENST00000561036 ATRQ13535 2644 aa12.38□□□□□ -0.43
HDDC3-206ENST00000561036 TRBV6-5A0A0K0K1A5 114 aa12.38□□□□□ -0.43
HDDC3-206ENST00000561036 RHODO00212 210 aa12.38□□□□□ -0.43
HDDC3-206ENST00000561036 KRTDAPP60985 99 aa12.38□□□□□ -0.43
HDDC3-206ENST00000561036 DAZ2Q13117 558 aaKnown RBP12.38□□□□□ -0.43
HDDC3-206ENST00000561036 LGALS9BQ3B8N2 356 aa12.38□□□□□ -0.43
HDDC3-206ENST00000561036 NIT2Q9NQR4 276 aa12.38□□□□□ -0.43
HDDC3-206ENST00000561036 H7C1H1 209 aa12.37□□□□□ -0.43
HDDC3-206ENST00000561036 SCGB1D1O95968 90 aa12.37□□□□□ -0.43
HDDC3-206ENST00000561036 HBDP02042 147 aa12.37□□□□□ -0.43
HDDC3-206ENST00000561036 C3orf79P0CE67 100 aa12.37□□□□□ -0.43
HDDC3-206ENST00000561036 APOC4P55056 127 aa12.37□□□□□ -0.43
HDDC3-206ENST00000561036 ZNF56Q15929 161 aa12.37□□□□□ -0.43
HDDC3-206ENST00000561036 PMCHL1Q16048 86 aa12.37□□□□□ -0.43
HDDC3-206ENST00000561036 RRN3P1Q2M238 152 aa12.37□□□□□ -0.43
HDDC3-206ENST00000561036 FAM74A4Q5TZK3 123 aa12.37□□□□□ -0.43
HDDC3-206ENST00000561036 UFSP1Q6NVU6 142 aa12.37□□□□□ -0.43
HDDC3-206ENST00000561036 RPL39LQ96EH5 51 aaKnown RBP12.37□□□□□ -0.43
HDDC3-206ENST00000561036 ST20Q9HBF5 79 aa12.37□□□□□ -0.43
HDDC3-206ENST00000561036 TENM1Q9UKZ4 2725 aa12.36□□□□□ -0.43
HDDC3-206ENST00000561036 M0QY20 66 aa12.36□□□□□ -0.43
HDDC3-206ENST00000561036 RS1O15537 224 aa12.36□□□□□ -0.43
HDDC3-206ENST00000561036 BTF3P20290 206 aaKnown RBP12.36□□□□□ -0.43
HDDC3-206ENST00000561036 FCER1GP30273 86 aa12.36□□□□□ -0.43
HDDC3-206ENST00000561036 CFAP126Q5VTH2 177 aa12.36□□□□□ -0.43
HDDC3-206ENST00000561036 MAST4O15021 2626 aa12.36□□□□□ -0.43
HDDC3-206ENST00000561036 A0A096LNJ9 63 aa12.35□□□□□ -0.43
HDDC3-206ENST00000561036 SMIM9A6NGZ8 99 aa12.35□□□□□ -0.43
HDDC3-206ENST00000561036 LAGE3Q14657 143 aa12.35□□□□□ -0.43
HDDC3-206ENST00000561036 ZFP2Q6ZN57 461 aa12.35□□□□□ -0.43
HDDC3-206ENST00000561036 OVOL2Q9BRP0 275 aa12.35□□□□□ -0.43
HDDC3-206ENST00000561036 EGFEM1PQ0D2K5 195 aa12.34□□□□□ -0.43
HDDC3-206ENST00000561036 ORMDL2Q53FV1 153 aa12.34□□□□□ -0.43
HDDC3-206ENST00000561036 TMEM70Q9BUB7 260 aa12.34□□□□□ -0.43
HDDC3-206ENST00000561036 MAP1LC3CQ9BXW4 147 aa12.34□□□□□ -0.43
HDDC3-206ENST00000561036 MRPL16Q9NX20 251 aaKnown RBP12.34□□□□□ -0.43
HDDC3-206ENST00000561036 VCYO14598 125 aa12.33□□□□□ -0.44
HDDC3-206ENST00000561036 POLR2KP53803 58 aaKnown RBP12.33□□□□□ -0.44
HDDC3-206ENST00000561036 S100A12P80511 92 aa12.33□□□□□ -0.44
HDDC3-206ENST00000561036 TRGV1A0A0A0MS02 117 aa12.32□□□□□ -0.44
HDDC3-206ENST00000561036 PLAC8L1A1L4L8 177 aa12.32□□□□□ -0.44
HDDC3-206ENST00000561036 CIDEAO60543 219 aa12.32□□□□□ -0.44
HDDC3-206ENST00000561036 PET117Q6UWS5 81 aa12.32□□□□□ -0.44
HDDC3-206ENST00000561036 Q8N976 141 aa12.32□□□□□ -0.44
HDDC3-206ENST00000561036 SYS1-DBNDD2H3BUS1 97 aa12.31□□□□□ -0.44
HDDC3-206ENST00000561036 TCAPO15273 167 aa12.31□□□□□ -0.44
HDDC3-206ENST00000561036 G0S2P27469 103 aa12.31□□□□□ -0.44
HDDC3-206ENST00000561036 CDPF1Q6NVV7 123 aa12.31□□□□□ -0.44
HDDC3-206ENST00000561036 LINC00173Q6ZV60 143 aa12.31□□□□□ -0.44
HDDC3-206ENST00000561036 SPATA12Q7Z6I5 190 aa12.31□□□□□ -0.44
HDDC3-206ENST00000561036 TRAV4A0A0B4J268 109 aa12.3□□□□□ -0.44
HDDC3-206ENST00000561036 TRBV27A0A0K0K1C4 114 aa12.3□□□□□ -0.44
HDDC3-206ENST00000561036 C20orf202A1L168 122 aa12.3□□□□□ -0.44
HDDC3-206ENST00000561036 IGHV3-53P01767 116 aa12.3□□□□□ -0.44
HDDC3-206ENST00000561036 OXLD1Q5BKU9 147 aa12.3□□□□□ -0.44
HDDC3-206ENST00000561036 TEX43Q6ZNM6 134 aa12.3□□□□□ -0.44
HDDC3-206ENST00000561036 OR4C5Q8NGB2 326 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms