RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 A0A087WWL8 130 aa8.19□□□□□ -1.1
SPG11-217ENST00000559511 Q8N1Y9 231 aa8.19□□□□□ -1.1
SPG11-217ENST00000559511 C9orf85Q96MD7 179 aa8.19□□□□□ -1.1
SPG11-217ENST00000559511 TAX1BP3O14907 124 aa8.18□□□□□ -1.1
SPG11-217ENST00000559511 DPM2O94777 84 aa8.18□□□□□ -1.1
SPG11-217ENST00000559511 ORMDL2Q53FV1 153 aa8.18□□□□□ -1.1
SPG11-217ENST00000559511 AMTNQ6UX39 209 aa8.18□□□□□ -1.1
SPG11-217ENST00000559511 FOXI2Q6ZQN5 318 aa8.18□□□□□ -1.1
SPG11-217ENST00000559511 NEGR1Q7Z3B1 354 aa8.18□□□□□ -1.1
SPG11-217ENST00000559511 OR11H1Q8NG94 326 aa8.18□□□□□ -1.1
SPG11-217ENST00000559511 MRPL35Q9NZE8 188 aaKnown RBP8.18□□□□□ -1.1
SPG11-217ENST00000559511 LINC01619G3V211 115 aa8.18□□□□□ -1.1
SPG11-217ENST00000559511 SUMO4Q6EEV6 95 aa8.18□□□□□ -1.1
SPG11-217ENST00000559511 TOMM6Q96B49 74 aa8.18□□□□□ -1.1
SPG11-217ENST00000559511 CSTL1Q9H114 145 aa8.18□□□□□ -1.1
SPG11-217ENST00000559511 TMEM160Q9NX00 188 aa8.18□□□□□ -1.1
SPG11-217ENST00000559511 ANK3Q12955 4377 aaKnown RBP8.18□□□□□ -1.1
SPG11-217ENST00000559511 IGHV1OR15-1A0A075B7D0 117 aa8.17□□□□□ -1.1
SPG11-217ENST00000559511 A0A087WX48 190 aa8.17□□□□□ -1.1
SPG11-217ENST00000559511 KNCNA6PVL3 124 aa8.17□□□□□ -1.1
SPG11-217ENST00000559511 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.17□□□□□ -1.1
SPG11-217ENST00000559511 DUSP14O95147 198 aaKnown RBP8.17□□□□□ -1.1
SPG11-217ENST00000559511 TMEM97Q5BJF2 176 aa8.17□□□□□ -1.1
SPG11-217ENST00000559511 KHDC1LQ5JSQ8 128 aa8.17□□□□□ -1.1
SPG11-217ENST00000559511 ZC2HC1BQ5TFG8 222 aa8.17□□□□□ -1.1
SPG11-217ENST00000559511 ERASQ7Z444 233 aa8.17□□□□□ -1.1
SPG11-217ENST00000559511 GTSCR1Q86UQ5 136 aa8.17□□□□□ -1.1
SPG11-217ENST00000559511 C4orf3Q8WVX3 66 aa8.17□□□□□ -1.1
SPG11-217ENST00000559511 TTTY13Q9BZ97 58 aa8.17□□□□□ -1.1
SPG11-217ENST00000559511 CHTOPQ9Y3Y2 248 aaKnown RBP8.17□□□□□ -1.1
SPG11-217ENST00000559511 K7EMI3 77 aa8.17□□□□□ -1.1
SPG11-217ENST00000559511 PPP1R17O96001 155 aa8.17□□□□□ -1.1
SPG11-217ENST00000559511 RBMY1A1P0DJD3 496 aaKnown RBP8.17□□□□□ -1.1
SPG11-217ENST00000559511 RBMY1CP0DJD4 496 aa8.17□□□□□ -1.1
SPG11-217ENST00000559511 RBMY1FQ15415 496 aaKnown RBP8.17□□□□□ -1.1
SPG11-217ENST00000559511 OR9G4Q8NGQ1 327 aa8.17□□□□□ -1.1
SPG11-217ENST00000559511 SCGB3A1Q96QR1 104 aa8.17□□□□□ -1.1
SPG11-217ENST00000559511 HECTD1Q9ULT8 2610 aa8.16□□□□□ -1.1
SPG11-217ENST00000559511 FAM74A4Q5TZK3 123 aa8.16□□□□□ -1.1
SPG11-217ENST00000559511 DEFB104AQ8WTQ1 72 aa8.16□□□□□ -1.1
SPG11-217ENST00000559511 DLX4Q92988 240 aaPredicted RBP8.16□□□□□ -1.1
SPG11-217ENST00000559511 F5H697 171 aa8.15□□□□□ -1.1
SPG11-217ENST00000559511 SIVA1O15304 175 aa8.15□□□□□ -1.1
SPG11-217ENST00000559511 PCP4P48539 62 aa8.15□□□□□ -1.1
SPG11-217ENST00000559511 DEFB131AP59861 70 aa8.15□□□□□ -1.1
SPG11-217ENST00000559511 COTL1Q14019 142 aa8.15□□□□□ -1.1
SPG11-217ENST00000559511 C2orf66Q6UXQ4 117 aa8.15□□□□□ -1.1
SPG11-217ENST00000559511 TMEM61Q8N0U2 210 aa8.15□□□□□ -1.1
SPG11-217ENST00000559511 KLHL30-AS1Q8NEE0 82 aa8.15□□□□□ -1.1
SPG11-217ENST00000559511 TRAV12-1A0A0B4J245 112 aa8.15□□□□□ -1.11
SPG11-217ENST00000559511 CBY3A6NI87 242 aa8.15□□□□□ -1.11
SPG11-217ENST00000559511 CCL25O15444 150 aa8.15□□□□□ -1.11
SPG11-217ENST00000559511 POLR2KP53803 58 aaKnown RBP8.15□□□□□ -1.11
SPG11-217ENST00000559511 NEXN-AS1Q8NBZ9 246 aa8.15□□□□□ -1.11
SPG11-217ENST00000559511 PEMTQ9UBM1 199 aa8.15□□□□□ -1.11
SPG11-217ENST00000559511 MTORP42345 2549 aa8.14□□□□□ -1.11
SPG11-217ENST00000559511 NIPBLQ6KC79 2804 aaeCLIP8.14□□□□□ -1.11
SPG11-217ENST00000559511 RBMY1BA6NDE4 496 aaKnown RBP8.14□□□□□ -1.11
SPG11-217ENST00000559511 RBMY1EA6NEQ0 496 aaKnown RBP8.14□□□□□ -1.11
SPG11-217ENST00000559511 RBMY1DP0C7P1 496 aaKnown RBP8.14□□□□□ -1.11
SPG11-217ENST00000559511 SMR3AQ99954 134 aa8.14□□□□□ -1.11
SPG11-217ENST00000559511 SETXQ7Z333 2677 aaKnown RBP8.14□□□□□ -1.11
SPG11-217ENST00000559511 FLNBO75369 2602 aaKnown RBP8.14□□□□□ -1.11
SPG11-217ENST00000559511 F8VRH5 84 aa8.14□□□□□ -1.11
SPG11-217ENST00000559511 H7C1H1 209 aa8.14□□□□□ -1.11
SPG11-217ENST00000559511 CRYGDP07320 174 aa8.14□□□□□ -1.11
SPG11-217ENST00000559511 HLA-DRB4P13762 266 aa8.14□□□□□ -1.11
SPG11-217ENST00000559511 PLNP26678 52 aa8.14□□□□□ -1.11
SPG11-217ENST00000559511 RPL32P62910 135 aaKnown RBP8.14□□□□□ -1.11
SPG11-217ENST00000559511 HSD52Q0P140 79 aa8.14□□□□□ -1.11
SPG11-217ENST00000559511 UBE2V1Q13404 147 aa8.14□□□□□ -1.11
SPG11-217ENST00000559511 C21orf62-AS1Q17RA5 79 aa8.14□□□□□ -1.11
SPG11-217ENST00000559511 SYT8Q8NBV8 401 aa8.14□□□□□ -1.11
SPG11-217ENST00000559511 BAALCQ8WXS3 180 aa8.14□□□□□ -1.11
SPG11-217ENST00000559511 HLA-DRB4X5D2U9 266 aa8.14□□□□□ -1.11
SPG11-217ENST00000559511 WNK1Q9H4A3 2382 aa8.13□□□□□ -1.11
SPG11-217ENST00000559511 H3BMM0 161 aa8.13□□□□□ -1.11
SPG11-217ENST00000559511 RNASE1P07998 156 aaKnown RBP8.13□□□□□ -1.11
SPG11-217ENST00000559511 PTTG1IPP53801 180 aa8.13□□□□□ -1.11
SPG11-217ENST00000559511 SEC11AP67812 179 aa8.13□□□□□ -1.11
SPG11-217ENST00000559511 MORN3Q6PF18 240 aaPredicted RBP8.13□□□□□ -1.11
SPG11-217ENST00000559511 SDHAF1A6NFY7 115 aa8.12□□□□□ -1.11
SPG11-217ENST00000559511 A8MTW9 85 aa8.12□□□□□ -1.11
SPG11-217ENST00000559511 M0QY20 66 aa8.12□□□□□ -1.11
SPG11-217ENST00000559511 PRM2P04554 102 aa8.12□□□□□ -1.11
SPG11-217ENST00000559511 ZNF56Q15929 161 aa8.12□□□□□ -1.11
SPG11-217ENST00000559511 ZFP2Q6ZN57 461 aa8.12□□□□□ -1.11
SPG11-217ENST00000559511 NACAE9PAV3 2078 aa8.12□□□□□ -1.11
SPG11-217ENST00000559511 TRGV11A0A075B6L2 103 aa8.12□□□□□ -1.11
SPG11-217ENST00000559511 TRAV2A0A0B4J234 112 aa8.12□□□□□ -1.11
SPG11-217ENST00000559511 VCYO14598 125 aa8.12□□□□□ -1.11
SPG11-217ENST00000559511 TSHBP01222 138 aa8.12□□□□□ -1.11
SPG11-217ENST00000559511 VAMP3Q15836 100 aa8.12□□□□□ -1.11
SPG11-217ENST00000559511 DEFB114Q30KQ6 69 aa8.12□□□□□ -1.11
SPG11-217ENST00000559511 ZNF876PQ49A33 203 aa8.12□□□□□ -1.11
SPG11-217ENST00000559511 MAPKAPK5-AS1Q8N8E1 139 aa8.12□□□□□ -1.11
SPG11-217ENST00000559511 C11orf44Q8N8P7 122 aa8.12□□□□□ -1.11
SPG11-217ENST00000559511 DYNLRB2Q8TF09 96 aa8.12□□□□□ -1.11
SPG11-217ENST00000559511 MAP6D1Q9H9H5 199 aa8.12□□□□□ -1.11
SPG11-217ENST00000559511 TRBV25-1A0A075B6N4 114 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms