RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 H3BUT2 72 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 GNRH2O43555 120 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 IGLV1-51P01701 117 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 MSMBP08118 114 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 PRB4P10163 310 aaPredicted RBP1.51□□□□□ -2.17
SPG11-206ENST00000558093 PIPP12273 146 aaPredicted RBP1.51□□□□□ -2.17
SPG11-206ENST00000558093 ZNF22P17026 224 aaPredicted RBP1.51□□□□□ -2.17
SPG11-206ENST00000558093 XCL1P47992 114 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 LGALSLQ3ZCW2 172 aaPredicted RBP1.51□□□□□ -2.17
SPG11-206ENST00000558093 NMSQ5H8A3 153 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 C12orf73Q69YU5 71 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 LYZL1Q6UWQ5 148 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 Q6ZQT7 251 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 LYZL2Q7Z4W2 148 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 Q8N814 137 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 Q8NDZ9 215 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 CXCL16Q9H2A7 254 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 NDUFB11Q9NX14 153 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 LINC00474Q9P2X8 69 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 RABAC1Q9UI14 185 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 RGPD1P0DJD0 1748 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 PTPN23Q9H3S7 1636 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 SETBP1Q9Y6X0 1596 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 MPDZO75970 2070 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 MYOFQ9NZM1 2061 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 PRXQ9BXM0 1461 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 FANCD2Q9BXW9 1451 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 SHANK2Q9UPX8 1470 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 EDC4Q6P2E9 1401 aaKnown RBP1.5□□□□□ -2.17
SPG11-206ENST00000558093 IGHV3OR16-8A0A075B7F1 116 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 C17orf98A8MV24 154 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 SYS1-DBNDD2H3BUS1 97 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 CCKP06307 115 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 GNG11P61952 73 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 UBE2G1P62253 170 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 CCL8P80075 99 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 ZNF345Q14585 488 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 ESPL1Q14674 2120 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 RHOHQ15669 191 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 FAM27BQ5VT28 67 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 COMMD6Q7Z4G1 85 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 LINC00269Q8N2A0 174 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 FAM19A2Q8N3H0 131 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 OR8B3Q8NGG8 313 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 TVP23CQ96ET8 276 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 OR8B2Q96RD0 313 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 MGST2Q99735 147 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 SMIM7Q9BQ49 75 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 SMDT1Q9H4I9 107 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 NDUFA12Q9UI09 145 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 TRAPPC1Q9Y5R8 145 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 ITSN2Q9NZM3 1697 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 CFAP74Q9C0B2 1584 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 PXDNQ92626 1479 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 KIAA1549LQ6ZVL6 1849 aa1.5□□□□□ -2.17
SPG11-206ENST00000558093 RIC1Q4ADV7 1423 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 HEATR1Q9H583 2144 aaKnown RBP1.49□□□□□ -2.17
SPG11-206ENST00000558093 LRP5O75197 1615 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 ABCA6Q8N139 1617 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 MYO3AQ8NEV4 1616 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 IGKV1D-42A0A075B6H8 117 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 TRAV7A0A075B6U4 112 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 IGHV3-15A0A0B4J1V0 119 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 TRAV2A0A0B4J234 112 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 C7orf77A4D0Y5 90 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 NAP1L6A6NFF2 107 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 HMSDA8MTL9 139 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 IBA57-AS1B1ANH7 110 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 C5orf67F2Z3F1 127 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 CLPSP04118 112 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 P0C880 135 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 MGST1P10620 155 aaKnown RBP1.49□□□□□ -2.17
SPG11-206ENST00000558093 KRTDAPP60985 99 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 ZNF117Q03924 483 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 ESRGQ1W209 222 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 ASB16-AS1Q495Z4 193 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 C1orf134Q5TEV5 83 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 SPANXN1Q5VSR9 72 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 Q6ZQT0 140 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 TMEM136Q6ZRR5 245 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 DYNAPQ8N1N2 210 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 RPRMLQ8N4K4 120 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 SERP2Q8N6R1 65 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 SPANXA2-OT1Q8N9U9 137 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 MUC7Q8TAX7 377 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 C18orf32Q8TCD1 76 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 MYOZ3Q8TDC0 251 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 TMEM141Q96I45 108 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 Q96M85 177 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 CYSTM1Q9H1C7 97 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 NXT2Q9NPJ8 142 aaKnown RBP1.49□□□□□ -2.17
SPG11-206ENST00000558093 TIMM9Q9Y5J7 89 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 GBF1Q92538 1859 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 EFCAB5A4FU69 1503 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 CUX1P39880 1505 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 ABCC2Q92887 1545 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 DISP1Q96F81 1524 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 AFDNP55196 1824 aaKnown RBP1.49□□□□□ -2.17
SPG11-206ENST00000558093 LTBP2Q14767 1821 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 ARFGEF1Q9Y6D6 1849 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms