RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 IGHV3-30-5P0DP03 117 aa8.4□□□□□ -1.06
SHMT2-223ENST00000556689 GATA1P15976 413 aaPredicted RBP8.4□□□□□ -1.06
SHMT2-223ENST00000556689 GOLT1AQ6ZVE7 132 aa8.4□□□□□ -1.06
SHMT2-223ENST00000556689 EPDR1Q9UM22 224 aa8.4□□□□□ -1.06
SHMT2-223ENST00000556689 LENEPQ9Y5L5 61 aa8.4□□□□□ -1.06
SHMT2-223ENST00000556689 SCO2A0A1W2PP80 73 aa8.39□□□□□ -1.07
SHMT2-223ENST00000556689 DIRC3C9JPN6 131 aa8.39□□□□□ -1.07
SHMT2-223ENST00000556689 TDRG1Q3Y452 100 aa8.39□□□□□ -1.07
SHMT2-223ENST00000556689 TMEM75Q8N9X5 138 aa8.39□□□□□ -1.07
SHMT2-223ENST00000556689 C11orf52Q96A22 123 aa8.39□□□□□ -1.07
SHMT2-223ENST00000556689 NAGKQ9UJ70 344 aa8.39□□□□□ -1.07
SHMT2-223ENST00000556689 LRP1Q07954 4544 aaKnown RBP8.39□□□□□ -1.07
SHMT2-223ENST00000556689 OXTP01178 125 aa8.38□□□□□ -1.07
SHMT2-223ENST00000556689 GNG4P50150 75 aa8.38□□□□□ -1.07
SHMT2-223ENST00000556689 GNG5P63218 68 aa8.38□□□□□ -1.07
SHMT2-223ENST00000556689 LAGE3Q14657 143 aa8.38□□□□□ -1.07
SHMT2-223ENST00000556689 ZNF674Q2M3X9 581 aa8.38□□□□□ -1.07
SHMT2-223ENST00000556689 FAM74A3Q4VXF1 159 aa8.38□□□□□ -1.07
SHMT2-223ENST00000556689 LELP1Q5T871 98 aa8.38□□□□□ -1.07
SHMT2-223ENST00000556689 SLC25A29Q8N8R3 303 aa8.38□□□□□ -1.07
SHMT2-223ENST00000556689 SMIM7Q9BQ49 75 aa8.38□□□□□ -1.07
SHMT2-223ENST00000556689 PRADC1Q9BSG0 188 aa8.38□□□□□ -1.07
SHMT2-223ENST00000556689 BIN3Q9NQY0 253 aa8.38□□□□□ -1.07
SHMT2-223ENST00000556689 WFDC2Q14508 124 aa8.37□□□□□ -1.07
SHMT2-223ENST00000556689 SAPCD1Q5SSQ6 148 aa8.37□□□□□ -1.07
SHMT2-223ENST00000556689 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.36□□□□□ -1.07
SHMT2-223ENST00000556689 TRAV8-3A0A0A6YYJ7 113 aa8.36□□□□□ -1.07
SHMT2-223ENST00000556689 TRBV6-4A0A1B0GX49 114 aa8.36□□□□□ -1.07
SHMT2-223ENST00000556689 ZNF727A8MUV8 499 aa8.36□□□□□ -1.07
SHMT2-223ENST00000556689 LECT2O14960 151 aa8.36□□□□□ -1.07
SHMT2-223ENST00000556689 CIDEAO60543 219 aa8.36□□□□□ -1.07
SHMT2-223ENST00000556689 RPL35P42766 123 aaKnown RBP8.36□□□□□ -1.07
SHMT2-223ENST00000556689 FLI1Q01543 452 aaPredicted RBP8.36□□□□□ -1.07
SHMT2-223ENST00000556689 Q86TA4 180 aa8.36□□□□□ -1.07
SHMT2-223ENST00000556689 SMIM12Q96EX1 92 aa8.36□□□□□ -1.07
SHMT2-223ENST00000556689 GTSF1LQ9H1H1 148 aa8.36□□□□□ -1.07
SHMT2-223ENST00000556689 PARLQ9H300 379 aa8.36□□□□□ -1.07
SHMT2-223ENST00000556689 PLA2G2DQ9UNK4 145 aa8.36□□□□□ -1.07
SHMT2-223ENST00000556689 TRAV21A0A0B4J279 112 aa8.35□□□□□ -1.07
SHMT2-223ENST00000556689 KRBOX1C9JBD0 128 aa8.35□□□□□ -1.07
SHMT2-223ENST00000556689 F8W036 122 aa8.35□□□□□ -1.07
SHMT2-223ENST00000556689 TYMSP04818 313 aa8.35□□□□□ -1.07
SHMT2-223ENST00000556689 SRP19P09132 144 aaKnown RBP8.35□□□□□ -1.07
SHMT2-223ENST00000556689 RHOHQ15669 191 aa8.35□□□□□ -1.07
SHMT2-223ENST00000556689 CENPWQ5EE01 88 aa8.35□□□□□ -1.07
SHMT2-223ENST00000556689 SCXQ7RTU7 201 aa8.35□□□□□ -1.07
SHMT2-223ENST00000556689 PRNTQ86SH4 94 aa8.35□□□□□ -1.07
SHMT2-223ENST00000556689 ATP6V0E2Q8NHE4 81 aa8.35□□□□□ -1.07
SHMT2-223ENST00000556689 SDF2L1Q9HCN8 221 aa8.35□□□□□ -1.07
SHMT2-223ENST00000556689 ZFP30Q9Y2G7 519 aa8.35□□□□□ -1.07
SHMT2-223ENST00000556689 FAT3Q8TDW7 4589 aa8.35□□□□□ -1.07
SHMT2-223ENST00000556689 ZNF876PQ49A33 203 aa8.34□□□□□ -1.07
SHMT2-223ENST00000556689 LINC01620Q4KN68 170 aa8.34□□□□□ -1.07
SHMT2-223ENST00000556689 CFAP126Q5VTH2 177 aa8.34□□□□□ -1.07
SHMT2-223ENST00000556689 KCNS1Q96KK3 526 aa8.34□□□□□ -1.07
SHMT2-223ENST00000556689 CHAC1Q9BUX1 264 aa8.34□□□□□ -1.07
SHMT2-223ENST00000556689 PSG8Q9UQ74 426 aa8.34□□□□□ -1.07
SHMT2-223ENST00000556689 IGHV3-73A0A0B4J1V6 119 aa8.33□□□□□ -1.08
SHMT2-223ENST00000556689 TRBV6-1A0A0K0K1D8 114 aa8.33□□□□□ -1.08
SHMT2-223ENST00000556689 RS1O15537 224 aa8.33□□□□□ -1.08
SHMT2-223ENST00000556689 MGST1P10620 155 aaKnown RBP8.33□□□□□ -1.08
SHMT2-223ENST00000556689 KRTAP10-4P60372 401 aaPredicted RBP8.33□□□□□ -1.08
SHMT2-223ENST00000556689 PNRC1Q12796 327 aaPredicted RBP8.33□□□□□ -1.08
SHMT2-223ENST00000556689 BAGE2Q86Y30 109 aa8.33□□□□□ -1.08
SHMT2-223ENST00000556689 BAALCQ8WXS3 180 aa8.33□□□□□ -1.08
SHMT2-223ENST00000556689 NAT8Q9UHE5 227 aa8.33□□□□□ -1.08
SHMT2-223ENST00000556689 COX11Q9Y6N1 276 aa8.33□□□□□ -1.08
SHMT2-223ENST00000556689 TRAV8-1A0A0A6YYK1 113 aa8.32□□□□□ -1.08
SHMT2-223ENST00000556689 TRAV34A0A0B4J273 112 aa8.32□□□□□ -1.08
SHMT2-223ENST00000556689 TMEM218A2RU14 115 aa8.32□□□□□ -1.08
SHMT2-223ENST00000556689 LTAP01374 205 aa8.32□□□□□ -1.08
SHMT2-223ENST00000556689 SRSF3P84103 164 aaKnown RBP8.32□□□□□ -1.08
SHMT2-223ENST00000556689 TMEM241Q24JQ0 296 aa8.32□□□□□ -1.08
SHMT2-223ENST00000556689 SMUG1Q53HV7 270 aa8.32□□□□□ -1.08
SHMT2-223ENST00000556689 DAZ4Q86SG3 579 aaKnown RBP8.32□□□□□ -1.08
SHMT2-223ENST00000556689 Q8N976 141 aa8.32□□□□□ -1.08
SHMT2-223ENST00000556689 DAZAP1Q96EP5 407 aaKnown RBP8.32□□□□□ -1.08
SHMT2-223ENST00000556689 DERL1Q9BUN8 251 aa8.32□□□□□ -1.08
SHMT2-223ENST00000556689 SEC11CQ9BY50 192 aa8.32□□□□□ -1.08
SHMT2-223ENST00000556689 DAZ3Q9NR90 486 aaKnown RBP8.32□□□□□ -1.08
SHMT2-223ENST00000556689 ADIRFQ15847 76 aa8.31□□□□□ -1.08
SHMT2-223ENST00000556689 Q8N3U1 123 aa8.31□□□□□ -1.08
SHMT2-223ENST00000556689 CIRBP-AS1Q8TBR5 109 aa8.31□□□□□ -1.08
SHMT2-223ENST00000556689 TVP23CQ96ET8 276 aa8.31□□□□□ -1.08
SHMT2-223ENST00000556689 M0R036 132 aa8.3□□□□□ -1.08
SHMT2-223ENST00000556689 FAM162BQ5T6X4 162 aa8.3□□□□□ -1.08
SHMT2-223ENST00000556689 PRR27Q6MZM9 219 aa8.3□□□□□ -1.08
SHMT2-223ENST00000556689 SLC7A5P1Q8MH63 180 aa8.3□□□□□ -1.08
SHMT2-223ENST00000556689 C15orf54Q8N8G6 183 aa8.3□□□□□ -1.08
SHMT2-223ENST00000556689 SGK494Q96LW2 274 aa8.3□□□□□ -1.08
SHMT2-223ENST00000556689 LINC00479Q96M42 142 aa8.3□□□□□ -1.08
SHMT2-223ENST00000556689 GCGP01275 180 aa8.29□□□□□ -1.08
SHMT2-223ENST00000556689 SVBPQ8N300 66 aa8.29□□□□□ -1.08
SHMT2-223ENST00000556689 PTH2Q96A98 100 aa8.29□□□□□ -1.08
SHMT2-223ENST00000556689 RMI2Q96E14 147 aa8.29□□□□□ -1.08
SHMT2-223ENST00000556689 A0A087WWC5 75 aa8.28□□□□□ -1.08
SHMT2-223ENST00000556689 XKRY2A2RUG3 117 aa8.28□□□□□ -1.08
SHMT2-223ENST00000556689 GAGE12JA6NER3 117 aa8.28□□□□□ -1.08
SHMT2-223ENST00000556689 PGPEP1LA6NFU8 196 aa8.28□□□□□ -1.08
SHMT2-223ENST00000556689 B4DEV8 164 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms